data_6ZJH
#
_model_server_result.job_id            LlkkMittQdBsYpCA8CohWA 
_model_server_result.datetime_utc      '2025-02-20 08:52:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zjh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6ZJH 
#
_exptl.entry_id    6ZJH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ZJH 
_cell.length_a            60.433 
_cell.length_b            68.387 
_cell.length_c            110.753 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZJH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   GLC 
_pdbx_entity_branch_link.comp_id_2                   GLC 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O1 
_pdbx_entity_branch_link.leaving_atom_id_2           HO1 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B GLC 1 AaA 1 GLC AaA 401 GLC 
2 n B GLC 2 AaA 2 GLC AbA 402 GLC 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            B 
_struct_conn.ptnr1_label_atom_id            O1 
_struct_conn.ptnr1_label_comp_id            GLC 
_struct_conn.ptnr1_label_seq_id             . 
_struct_conn.ptnr1_auth_asym_id             AaA 
_struct_conn.ptnr1_auth_comp_id             GLC 
_struct_conn.ptnr1_auth_seq_id              1 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            C1 
_struct_conn.ptnr2_label_comp_id            GLC 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             AaA 
_struct_conn.ptnr2_auth_comp_id             GLC 
_struct_conn.ptnr2_auth_seq_id              2 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.339 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 153 n n 
C1 C2 GOL sing 154 n n 
C1 H11 GOL sing 155 n n 
C1 H12 GOL sing 156 n n 
O1 HO1 GOL sing 157 n n 
C2 O2 GOL sing 158 n n 
C2 C3 GOL sing 159 n n 
C2 H2 GOL sing 160 n n 
O2 HO2 GOL sing 161 n n 
C3 O3 GOL sing 162 n n 
C3 H31 GOL sing 163 n n 
C3 H32 GOL sing 164 n n 
O3 HO3 GOL sing 165 n n 
#
_atom_sites.entry_id                     6ZJH 
_atom_sites.fract_transf_matrix[1][1]    0.016547 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014623 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009029 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL AAA 1 501 403 GOL GOL . 
D 4 HOH AAA 1 601 78 HOH HOH . 
D 4 HOH AAA 2 602 29 HOH HOH . 
D 4 HOH AAA 3 603 74 HOH HOH . 
D 4 HOH AAA 4 604 30 HOH HOH . 
D 4 HOH AAA 5 605 73 HOH HOH . 
D 4 HOH AAA 6 606 26 HOH HOH . 
D 4 HOH AAA 7 607 38 HOH HOH . 
D 4 HOH AAA 8 608 24 HOH HOH . 
D 4 HOH AAA 9 609 63 HOH HOH . 
D 4 HOH AAA 10 610 32 HOH HOH . 
D 4 HOH AAA 11 611 66 HOH HOH . 
D 4 HOH AAA 12 612 4 HOH HOH . 
D 4 HOH AAA 13 613 49 HOH HOH . 
D 4 HOH AAA 14 614 50 HOH HOH . 
D 4 HOH AAA 15 615 72 HOH HOH . 
D 4 HOH AAA 16 616 27 HOH HOH . 
D 4 HOH AAA 17 617 70 HOH HOH . 
D 4 HOH AAA 18 618 86 HOH HOH . 
D 4 HOH AAA 19 619 12 HOH HOH . 
D 4 HOH AAA 20 620 17 HOH HOH . 
D 4 HOH AAA 21 621 87 HOH HOH . 
D 4 HOH AAA 22 622 71 HOH HOH . 
D 4 HOH AAA 23 623 18 HOH HOH . 
D 4 HOH AAA 24 624 21 HOH HOH . 
D 4 HOH AAA 25 625 65 HOH HOH . 
D 4 HOH AAA 26 626 60 HOH HOH . 
D 4 HOH AAA 27 627 34 HOH HOH . 
D 4 HOH AAA 28 628 33 HOH HOH . 
D 4 HOH AAA 29 629 52 HOH HOH . 
D 4 HOH AAA 30 630 43 HOH HOH . 
D 4 HOH AAA 31 631 22 HOH HOH . 
D 4 HOH AAA 32 632 56 HOH HOH . 
D 4 HOH AAA 33 633 16 HOH HOH . 
D 4 HOH AAA 34 634 19 HOH HOH . 
D 4 HOH AAA 35 635 45 HOH HOH . 
D 4 HOH AAA 36 636 37 HOH HOH . 
D 4 HOH AAA 37 637 2 HOH HOH . 
D 4 HOH AAA 38 638 44 HOH HOH . 
D 4 HOH AAA 39 639 79 HOH HOH . 
D 4 HOH AAA 40 640 13 HOH HOH . 
D 4 HOH AAA 41 641 62 HOH HOH . 
D 4 HOH AAA 42 642 40 HOH HOH . 
D 4 HOH AAA 43 643 41 HOH HOH . 
D 4 HOH AAA 44 644 80 HOH HOH . 
D 4 HOH AAA 45 645 9 HOH HOH . 
D 4 HOH AAA 46 646 7 HOH HOH . 
D 4 HOH AAA 47 647 5 HOH HOH . 
D 4 HOH AAA 48 648 55 HOH HOH . 
D 4 HOH AAA 49 649 14 HOH HOH . 
D 4 HOH AAA 50 650 39 HOH HOH . 
D 4 HOH AAA 51 651 31 HOH HOH . 
D 4 HOH AAA 52 652 10 HOH HOH . 
D 4 HOH AAA 53 653 28 HOH HOH . 
D 4 HOH AAA 54 654 57 HOH HOH . 
D 4 HOH AAA 55 655 68 HOH HOH . 
D 4 HOH AAA 56 656 69 HOH HOH . 
D 4 HOH AAA 57 657 20 HOH HOH . 
D 4 HOH AAA 58 658 67 HOH HOH . 
D 4 HOH AAA 59 659 75 HOH HOH . 
D 4 HOH AAA 60 660 76 HOH HOH . 
D 4 HOH AAA 61 661 46 HOH HOH . 
D 4 HOH AAA 62 662 6 HOH HOH . 
D 4 HOH AAA 63 663 8 HOH HOH . 
D 4 HOH AAA 64 664 36 HOH HOH . 
D 4 HOH AAA 65 665 11 HOH HOH . 
D 4 HOH AAA 66 666 88 HOH HOH . 
D 4 HOH AAA 67 667 59 HOH HOH . 
D 4 HOH AAA 68 668 61 HOH HOH . 
D 4 HOH AAA 69 669 35 HOH HOH . 
D 4 HOH AAA 70 670 25 HOH HOH . 
D 4 HOH AAA 71 671 54 HOH HOH . 
D 4 HOH AAA 72 672 48 HOH HOH . 
D 4 HOH AAA 73 673 15 HOH HOH . 
D 4 HOH AAA 74 674 3 HOH HOH . 
D 4 HOH AAA 75 675 1 HOH HOH . 
D 4 HOH AAA 76 676 58 HOH HOH . 
D 4 HOH AAA 77 677 53 HOH HOH . 
D 4 HOH AAA 78 678 23 HOH HOH . 
D 4 HOH AAA 79 679 64 HOH HOH . 
D 4 HOH AAA 80 680 47 HOH HOH . 
D 4 HOH AAA 81 681 83 HOH HOH . 
D 4 HOH AAA 82 682 81 HOH HOH . 
D 4 HOH AAA 83 683 91 HOH HOH . 
D 4 HOH AAA 84 684 85 HOH HOH . 
D 4 HOH AAA 85 685 89 HOH HOH . 
D 4 HOH AAA 86 686 77 HOH HOH . 
D 4 HOH AAA 87 687 90 HOH HOH . 
D 4 HOH AAA 88 688 42 HOH HOH . 
D 4 HOH AAA 89 689 82 HOH HOH . 
D 4 HOH AAA 90 690 84 HOH HOH . 
D 4 HOH AAA 91 691 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 3 18.461 18.369 1.244 1 71.37 0 C1 GOL 501 AAA 1 
HETATM 2 O O1 GOL . . . C 3 19.023 17.136 0.801 1 71.31 0 O1 GOL 501 AAA 1 
HETATM 3 C C2 GOL . . . C 3 16.95 18.311 1.249 1 73.66 0 C2 GOL 501 AAA 1 
HETATM 4 O O2 GOL . . . C 3 16.425 19.618 1.015 1 72.74 0 O2 GOL 501 AAA 1 
HETATM 5 C C3 GOL . . . C 3 16.399 17.339 0.225 1 74.72 0 C3 GOL 501 AAA 1 
HETATM 6 O O3 GOL . . . C 3 14.978 17.395 0.157 1 75.17 0 O3 GOL 501 AAA 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           6 
#