data_6ZL5 # _model_server_result.job_id vrXyaKeBs0L-_WLdHhm-Mg _model_server_result.datetime_utc '2024-11-24 10:30:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zl5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6ZL5 # _exptl.entry_id 6ZL5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZL5 _cell.length_a 83.802 _cell.length_b 83.802 _cell.length_c 87.416 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZL5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 18 A SER 17 1_555 B MG MG . A MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc2 B MG MG . A MG 201 1_555 C O3B GDP . A GDP 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.946 ? metalc ? metalc3 B MG MG . A MG 201 1_555 F O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc4 B MG MG . A MG 201 1_555 F O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc5 B MG MG . A MG 201 1_555 F O HOH . A HOH 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc6 B MG MG . A MG 201 1_555 F O HOH . A HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ZL5 _atom_sites.fract_transf_matrix[1][1] 0.011933 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01144 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 201 1 MG MG . C 3 GDP A 1 202 1 GDP GDP . D 4 F0K A 1 203 1 F0K LIG . E 5 SO4 A 1 204 1 SO4 SO4 . F 6 HOH A 1 301 155 HOH HOH . F 6 HOH A 2 302 99 HOH HOH . F 6 HOH A 3 303 117 HOH HOH . F 6 HOH A 4 304 113 HOH HOH . F 6 HOH A 5 305 63 HOH HOH . F 6 HOH A 6 306 144 HOH HOH . F 6 HOH A 7 307 3 HOH HOH . F 6 HOH A 8 308 116 HOH HOH . F 6 HOH A 9 309 171 HOH HOH . F 6 HOH A 10 310 90 HOH HOH . F 6 HOH A 11 311 128 HOH HOH . F 6 HOH A 12 312 36 HOH HOH . F 6 HOH A 13 313 56 HOH HOH . F 6 HOH A 14 314 89 HOH HOH . F 6 HOH A 15 315 2 HOH HOH . F 6 HOH A 16 316 39 HOH HOH . F 6 HOH A 17 317 145 HOH HOH . F 6 HOH A 18 318 18 HOH HOH . F 6 HOH A 19 319 98 HOH HOH . F 6 HOH A 20 320 11 HOH HOH . F 6 HOH A 21 321 86 HOH HOH . F 6 HOH A 22 322 105 HOH HOH . F 6 HOH A 23 323 120 HOH HOH . F 6 HOH A 24 324 173 HOH HOH . F 6 HOH A 25 325 40 HOH HOH . F 6 HOH A 26 326 143 HOH HOH . F 6 HOH A 27 327 15 HOH HOH . F 6 HOH A 28 328 49 HOH HOH . F 6 HOH A 29 329 20 HOH HOH . F 6 HOH A 30 330 101 HOH HOH . F 6 HOH A 31 331 42 HOH HOH . F 6 HOH A 32 332 104 HOH HOH . F 6 HOH A 33 333 1 HOH HOH . F 6 HOH A 34 334 93 HOH HOH . F 6 HOH A 35 335 115 HOH HOH . F 6 HOH A 36 336 72 HOH HOH . F 6 HOH A 37 337 32 HOH HOH . F 6 HOH A 38 338 71 HOH HOH . F 6 HOH A 39 339 7 HOH HOH . F 6 HOH A 40 340 146 HOH HOH . F 6 HOH A 41 341 103 HOH HOH . F 6 HOH A 42 342 37 HOH HOH . F 6 HOH A 43 343 24 HOH HOH . F 6 HOH A 44 344 92 HOH HOH . F 6 HOH A 45 345 84 HOH HOH . F 6 HOH A 46 346 95 HOH HOH . F 6 HOH A 47 347 162 HOH HOH . F 6 HOH A 48 348 67 HOH HOH . F 6 HOH A 49 349 52 HOH HOH . F 6 HOH A 50 350 151 HOH HOH . F 6 HOH A 51 351 53 HOH HOH . F 6 HOH A 52 352 13 HOH HOH . F 6 HOH A 53 353 121 HOH HOH . F 6 HOH A 54 354 16 HOH HOH . F 6 HOH A 55 355 25 HOH HOH . F 6 HOH A 56 356 135 HOH HOH . F 6 HOH A 57 357 83 HOH HOH . F 6 HOH A 58 358 94 HOH HOH . F 6 HOH A 59 359 126 HOH HOH . F 6 HOH A 60 360 149 HOH HOH . F 6 HOH A 61 361 158 HOH HOH . F 6 HOH A 62 362 48 HOH HOH . F 6 HOH A 63 363 172 HOH HOH . F 6 HOH A 64 364 122 HOH HOH . F 6 HOH A 65 365 23 HOH HOH . F 6 HOH A 66 366 80 HOH HOH . F 6 HOH A 67 367 58 HOH HOH . F 6 HOH A 68 368 31 HOH HOH . F 6 HOH A 69 369 163 HOH HOH . F 6 HOH A 70 370 188 HOH HOH . F 6 HOH A 71 371 6 HOH HOH . F 6 HOH A 72 372 70 HOH HOH . F 6 HOH A 73 373 124 HOH HOH . F 6 HOH A 74 374 160 HOH HOH . F 6 HOH A 75 375 136 HOH HOH . F 6 HOH A 76 376 73 HOH HOH . F 6 HOH A 77 377 169 HOH HOH . F 6 HOH A 78 378 127 HOH HOH . F 6 HOH A 79 379 22 HOH HOH . F 6 HOH A 80 380 4 HOH HOH . F 6 HOH A 81 381 46 HOH HOH . F 6 HOH A 82 382 174 HOH HOH . F 6 HOH A 83 383 186 HOH HOH . F 6 HOH A 84 384 97 HOH HOH . F 6 HOH A 85 385 166 HOH HOH . F 6 HOH A 86 386 91 HOH HOH . F 6 HOH A 87 387 108 HOH HOH . F 6 HOH A 88 388 157 HOH HOH . F 6 HOH A 89 389 154 HOH HOH . F 6 HOH A 90 390 77 HOH HOH . F 6 HOH A 91 391 142 HOH HOH . F 6 HOH A 92 392 125 HOH HOH . F 6 HOH A 93 393 182 HOH HOH . F 6 HOH A 94 394 60 HOH HOH . F 6 HOH A 95 395 192 HOH HOH . F 6 HOH A 96 396 35 HOH HOH . F 6 HOH A 97 397 45 HOH HOH . F 6 HOH A 98 398 165 HOH HOH . F 6 HOH A 99 399 156 HOH HOH . F 6 HOH A 100 400 28 HOH HOH . F 6 HOH A 101 401 14 HOH HOH . F 6 HOH A 102 402 59 HOH HOH . F 6 HOH A 103 403 194 HOH HOH . F 6 HOH A 104 404 47 HOH HOH . F 6 HOH A 105 405 179 HOH HOH . F 6 HOH A 106 406 148 HOH HOH . F 6 HOH A 107 407 100 HOH HOH . F 6 HOH A 108 408 164 HOH HOH . F 6 HOH A 109 409 61 HOH HOH . F 6 HOH A 110 410 34 HOH HOH . F 6 HOH A 111 411 150 HOH HOH . F 6 HOH A 112 412 21 HOH HOH . F 6 HOH A 113 413 43 HOH HOH . F 6 HOH A 114 414 12 HOH HOH . F 6 HOH A 115 415 51 HOH HOH . F 6 HOH A 116 416 38 HOH HOH . F 6 HOH A 117 417 9 HOH HOH . F 6 HOH A 118 418 153 HOH HOH . F 6 HOH A 119 419 134 HOH HOH . F 6 HOH A 120 420 66 HOH HOH . F 6 HOH A 121 421 27 HOH HOH . F 6 HOH A 122 422 111 HOH HOH . F 6 HOH A 123 423 96 HOH HOH . F 6 HOH A 124 424 75 HOH HOH . F 6 HOH A 125 425 17 HOH HOH . F 6 HOH A 126 426 178 HOH HOH . F 6 HOH A 127 427 152 HOH HOH . F 6 HOH A 128 428 82 HOH HOH . F 6 HOH A 129 429 118 HOH HOH . F 6 HOH A 130 430 102 HOH HOH . F 6 HOH A 131 431 68 HOH HOH . F 6 HOH A 132 432 76 HOH HOH . F 6 HOH A 133 433 147 HOH HOH . F 6 HOH A 134 434 110 HOH HOH . F 6 HOH A 135 435 26 HOH HOH . F 6 HOH A 136 436 159 HOH HOH . F 6 HOH A 137 437 183 HOH HOH . F 6 HOH A 138 438 112 HOH HOH . F 6 HOH A 139 439 184 HOH HOH . F 6 HOH A 140 440 85 HOH HOH . F 6 HOH A 141 441 50 HOH HOH . F 6 HOH A 142 442 54 HOH HOH . F 6 HOH A 143 443 88 HOH HOH . F 6 HOH A 144 444 131 HOH HOH . F 6 HOH A 145 445 138 HOH HOH . F 6 HOH A 146 446 29 HOH HOH . F 6 HOH A 147 447 79 HOH HOH . F 6 HOH A 148 448 177 HOH HOH . F 6 HOH A 149 449 129 HOH HOH . F 6 HOH A 150 450 65 HOH HOH . F 6 HOH A 151 451 57 HOH HOH . F 6 HOH A 152 452 168 HOH HOH . F 6 HOH A 153 453 193 HOH HOH . F 6 HOH A 154 454 185 HOH HOH . F 6 HOH A 155 455 180 HOH HOH . F 6 HOH A 156 456 167 HOH HOH . F 6 HOH A 157 457 55 HOH HOH . F 6 HOH A 158 458 64 HOH HOH . F 6 HOH A 159 459 119 HOH HOH . F 6 HOH A 160 460 107 HOH HOH . F 6 HOH A 161 461 69 HOH HOH . F 6 HOH A 162 462 175 HOH HOH . F 6 HOH A 163 463 140 HOH HOH . F 6 HOH A 164 464 176 HOH HOH . F 6 HOH A 165 465 8 HOH HOH . F 6 HOH A 166 466 170 HOH HOH . F 6 HOH A 167 467 114 HOH HOH . F 6 HOH A 168 468 161 HOH HOH . F 6 HOH A 169 469 195 HOH HOH . F 6 HOH A 170 470 181 HOH HOH . F 6 HOH A 171 471 130 HOH HOH . F 6 HOH A 172 472 132 HOH HOH . F 6 HOH A 173 473 187 HOH HOH . F 6 HOH A 174 474 106 HOH HOH . F 6 HOH A 175 475 190 HOH HOH . F 6 HOH A 176 476 139 HOH HOH . F 6 HOH A 177 477 33 HOH HOH . F 6 HOH A 178 478 189 HOH HOH . F 6 HOH A 179 479 191 HOH HOH . F 6 HOH A 180 480 141 HOH HOH . F 6 HOH A 181 481 30 HOH HOH . F 6 HOH A 182 482 62 HOH HOH . F 6 HOH A 183 483 87 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -31.476 _atom_site.Cartn_y 23.155 _atom_site.Cartn_z 5.089 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.35 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 33 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 417 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #