data_6ZLC # _model_server_result.job_id E8lj2jFJJUPCoTboiBoIkw _model_server_result.datetime_utc '2024-10-19 17:40:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zlc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":101}' # _entry.id 6ZLC # _exptl.entry_id 6ZLC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZLC _cell.length_a 103.596 _cell.length_b 103.596 _cell.length_c 102.208 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 C N1 A 1 C A 1 1_555 D N3 U 19 D U 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 C N6 A 1 C A 1 1_555 D O4 U 19 D U 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 C N1 G 2 C G 2 1_555 D N3 C 18 D C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 C N2 G 2 C G 2 1_555 D O2 C 18 D C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 C O6 G 2 C G 2 1_555 D N4 C 18 D C 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 C N1 A 3 C A 3 1_555 D N3 U 17 D U 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 C N6 A 3 C A 3 1_555 D O4 U 17 D U 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 C N3 C 4 C C 4 1_555 D N1 G 16 D G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 C N4 C 4 C C 4 1_555 D O6 G 16 D G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 C O2 C 4 C C 4 1_555 D N2 G 16 D G 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 C N1 A 5 C A 5 1_555 D N3 U 15 D U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 C N6 A 5 C A 5 1_555 D O4 U 15 D U 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 C N1 G 6 C G 6 1_555 D N3 C 14 D C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 C N2 G 6 C G 6 1_555 D O2 C 14 D C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 C O6 G 6 C G 6 1_555 D N4 C 14 D C 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 C N3 C 7 C C 7 1_555 D N1 G 13 D G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 C N4 C 7 C C 7 1_555 D O6 G 13 D G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 C O2 C 7 C C 7 1_555 D N2 G 13 D G 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 C N1 A 8 C A 8 1_555 D N3 U 12 D U 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 C N6 A 8 C A 8 1_555 D O4 U 12 D U 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 C N3 U 9 C U 9 1_555 D N1 A 11 D A 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 C O4 U 9 C U 9 1_555 D N6 A 11 D A 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 C N1 A 11 C A 11 1_555 D N3 U 9 D U 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 C N6 A 11 C A 11 1_555 D O4 U 9 D U 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 C N3 U 12 C U 12 1_555 D N1 A 8 D A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 C O4 U 12 C U 12 1_555 D N6 A 8 D A 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 C N1 G 13 C G 13 1_555 D N3 C 7 D C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 C N2 G 13 C G 13 1_555 D O2 C 7 D C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 C O6 G 13 C G 13 1_555 D N4 C 7 D C 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 C N3 C 14 C C 14 1_555 D N1 G 6 D G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 C N4 C 14 C C 14 1_555 D O6 G 6 D G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 C O2 C 14 C C 14 1_555 D N2 G 6 D G 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 C N3 U 15 C U 15 1_555 D N1 A 5 D A 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 C O4 U 15 C U 15 1_555 D N6 A 5 D A 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 C N1 G 16 C G 16 1_555 D N3 C 4 D C 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog36 C N2 G 16 C G 16 1_555 D O2 C 4 D C 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog37 C O6 G 16 C G 16 1_555 D N4 C 4 D C 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog38 C N3 U 17 C U 17 1_555 D N1 A 3 D A 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog39 C O4 U 17 C U 17 1_555 D N6 A 3 D A 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog40 C N3 C 18 C C 18 1_555 D N1 G 2 D G 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog41 C N4 C 18 C C 18 1_555 D O6 G 2 D G 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog42 C O2 C 18 C C 18 1_555 D N2 G 2 D G 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog43 C N3 U 19 C U 19 1_555 D N1 A 1 D A 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog44 C O4 U 19 C U 19 1_555 D N6 A 1 D A 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 352 n n N O2 NO3 sing 353 n n N O3 NO3 sing 354 n n # _atom_sites.entry_id 6ZLC _atom_sites.fract_transf_matrix[1][1] 0.009653 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009784 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 A 1 101 1 SO4 SO4 . F 3 SO4 A 1 102 2 SO4 SO4 . G 4 NO3 A 1 103 3 NO3 NO3 . H 4 NO3 B 1 101 4 NO3 NO3 . I 4 NO3 C 1 101 2 NO3 NO3 . J 4 NO3 D 1 101 1 NO3 NO3 . K 5 HOH A 1 201 28 HOH HOH . K 5 HOH A 2 202 12 HOH HOH . K 5 HOH A 3 203 29 HOH HOH . K 5 HOH A 4 204 30 HOH HOH . K 5 HOH A 5 205 15 HOH HOH . K 5 HOH A 6 206 5 HOH HOH . K 5 HOH A 7 207 54 HOH HOH . K 5 HOH A 8 208 39 HOH HOH . K 5 HOH A 9 209 3 HOH HOH . K 5 HOH A 10 210 14 HOH HOH . K 5 HOH A 11 211 7 HOH HOH . K 5 HOH A 12 212 26 HOH HOH . K 5 HOH A 13 213 52 HOH HOH . K 5 HOH A 14 214 24 HOH HOH . K 5 HOH A 15 215 43 HOH HOH . K 5 HOH A 16 216 35 HOH HOH . K 5 HOH A 17 217 25 HOH HOH . K 5 HOH A 18 218 48 HOH HOH . K 5 HOH A 19 219 32 HOH HOH . L 5 HOH B 1 201 13 HOH HOH . L 5 HOH B 2 202 37 HOH HOH . L 5 HOH B 3 203 23 HOH HOH . L 5 HOH B 4 204 16 HOH HOH . L 5 HOH B 5 205 6 HOH HOH . L 5 HOH B 6 206 36 HOH HOH . L 5 HOH B 7 207 2 HOH HOH . L 5 HOH B 8 208 4 HOH HOH . L 5 HOH B 9 209 18 HOH HOH . L 5 HOH B 10 210 17 HOH HOH . L 5 HOH B 11 211 9 HOH HOH . L 5 HOH B 12 212 11 HOH HOH . L 5 HOH B 13 213 53 HOH HOH . L 5 HOH B 14 214 40 HOH HOH . L 5 HOH B 15 215 33 HOH HOH . L 5 HOH B 16 216 55 HOH HOH . L 5 HOH B 17 217 42 HOH HOH . L 5 HOH B 18 218 49 HOH HOH . L 5 HOH B 19 219 56 HOH HOH . L 5 HOH B 20 220 34 HOH HOH . M 5 HOH C 1 201 27 HOH HOH . M 5 HOH C 2 202 10 HOH HOH . M 5 HOH C 3 203 45 HOH HOH . M 5 HOH C 4 204 46 HOH HOH . M 5 HOH C 5 205 31 HOH HOH . M 5 HOH C 6 206 21 HOH HOH . M 5 HOH C 7 207 50 HOH HOH . N 5 HOH D 1 201 44 HOH HOH . N 5 HOH D 2 202 22 HOH HOH . N 5 HOH D 3 203 1 HOH HOH . N 5 HOH D 4 204 38 HOH HOH . N 5 HOH D 5 205 19 HOH HOH . N 5 HOH D 6 206 20 HOH HOH . N 5 HOH D 7 207 8 HOH HOH . N 5 HOH D 8 208 41 HOH HOH . N 5 HOH D 9 209 51 HOH HOH . N 5 HOH D 10 210 47 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . J 4 24.439 -9.445 10.769 1 93.99 ? N NO3 101 D 1 HETATM 2 O O1 NO3 . . . J 4 23.379 -10.024 10.383 1 95.25 ? O1 NO3 101 D 1 HETATM 3 O O2 NO3 . . . J 4 24.798 -8.346 10.247 1 92.28 ? O2 NO3 101 D 1 HETATM 4 O O3 NO3 . . . J 4 25.143 -9.971 11.68 1 93.67 ? O3 NO3 101 D 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #