data_6ZM9 # _model_server_result.job_id zwbJfwFS5ndjODOJhJUwbA _model_server_result.datetime_utc '2024-11-14 23:44:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zm9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6ZM9 # _exptl.entry_id 6ZM9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZM9 _cell.length_a 154.324 _cell.length_b 154.324 _cell.length_c 154.324 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZM9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 _symmetry.space_group_name_Hall 'F 4d 2 3' _symmetry.space_group_name_H-M 'F 41 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 48 A ASP 48 1_555 D NA NA . A NA 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? metalc ? metalc2 D NA NA . A NA 203 1_555 G O HOH . A HOH 400 5_555 ? ? ? ? A ? ? ? ? ? ? ? 2.751 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 263 n n P O2 PO4 sing 264 n n P O3 PO4 sing 265 n n P O4 PO4 sing 266 n n # _atom_sites.entry_id 6ZM9 _atom_sites.fract_transf_matrix[1][1] 0.00648 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00648 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 201 131 PO4 PO4 . C 2 PO4 A 1 202 132 PO4 PO4 . D 3 NA A 1 203 134 NA NA . E 4 PRO A 1 204 135 PRO PRO . F 5 MTA A 1 205 133 MTA MTA . G 6 HOH A 1 301 178 HOH HOH . G 6 HOH A 2 302 229 HOH HOH . G 6 HOH A 3 303 180 HOH HOH . G 6 HOH A 4 304 179 HOH HOH . G 6 HOH A 5 305 261 HOH HOH . G 6 HOH A 6 306 163 HOH HOH . G 6 HOH A 7 307 138 HOH HOH . G 6 HOH A 8 308 139 HOH HOH . G 6 HOH A 9 309 262 HOH HOH . G 6 HOH A 10 310 156 HOH HOH . G 6 HOH A 11 311 137 HOH HOH . G 6 HOH A 12 312 240 HOH HOH . G 6 HOH A 13 313 197 HOH HOH . G 6 HOH A 14 314 242 HOH HOH . G 6 HOH A 15 315 143 HOH HOH . G 6 HOH A 16 316 199 HOH HOH . G 6 HOH A 17 317 171 HOH HOH . G 6 HOH A 18 318 217 HOH HOH . G 6 HOH A 19 319 231 HOH HOH . G 6 HOH A 20 320 227 HOH HOH . G 6 HOH A 21 321 162 HOH HOH . G 6 HOH A 22 322 210 HOH HOH . G 6 HOH A 23 323 238 HOH HOH . G 6 HOH A 24 324 182 HOH HOH . G 6 HOH A 25 325 258 HOH HOH . G 6 HOH A 26 326 155 HOH HOH . G 6 HOH A 27 327 136 HOH HOH . G 6 HOH A 28 328 187 HOH HOH . G 6 HOH A 29 329 186 HOH HOH . G 6 HOH A 30 330 241 HOH HOH . G 6 HOH A 31 331 161 HOH HOH . G 6 HOH A 32 332 170 HOH HOH . G 6 HOH A 33 333 200 HOH HOH . G 6 HOH A 34 334 147 HOH HOH . G 6 HOH A 35 335 159 HOH HOH . G 6 HOH A 36 336 160 HOH HOH . G 6 HOH A 37 337 152 HOH HOH . G 6 HOH A 38 338 153 HOH HOH . G 6 HOH A 39 339 190 HOH HOH . G 6 HOH A 40 340 177 HOH HOH . G 6 HOH A 41 341 144 HOH HOH . G 6 HOH A 42 342 194 HOH HOH . G 6 HOH A 43 343 233 HOH HOH . G 6 HOH A 44 344 211 HOH HOH . G 6 HOH A 45 345 146 HOH HOH . G 6 HOH A 46 346 220 HOH HOH . G 6 HOH A 47 347 166 HOH HOH . G 6 HOH A 48 348 164 HOH HOH . G 6 HOH A 49 349 221 HOH HOH . G 6 HOH A 50 350 183 HOH HOH . G 6 HOH A 51 351 244 HOH HOH . G 6 HOH A 52 352 236 HOH HOH . G 6 HOH A 53 353 168 HOH HOH . G 6 HOH A 54 354 141 HOH HOH . G 6 HOH A 55 355 154 HOH HOH . G 6 HOH A 56 356 184 HOH HOH . G 6 HOH A 57 357 169 HOH HOH . G 6 HOH A 58 358 189 HOH HOH . G 6 HOH A 59 359 205 HOH HOH . G 6 HOH A 60 360 224 HOH HOH . G 6 HOH A 61 361 149 HOH HOH . G 6 HOH A 62 362 140 HOH HOH . G 6 HOH A 63 363 252 HOH HOH . G 6 HOH A 64 364 148 HOH HOH . G 6 HOH A 65 365 201 HOH HOH . G 6 HOH A 66 366 198 HOH HOH . G 6 HOH A 67 367 207 HOH HOH . G 6 HOH A 68 368 245 HOH HOH . G 6 HOH A 69 369 150 HOH HOH . G 6 HOH A 70 370 158 HOH HOH . G 6 HOH A 71 371 235 HOH HOH . G 6 HOH A 72 372 247 HOH HOH . G 6 HOH A 73 373 145 HOH HOH . G 6 HOH A 74 374 223 HOH HOH . G 6 HOH A 75 375 214 HOH HOH . G 6 HOH A 76 376 192 HOH HOH . G 6 HOH A 77 377 202 HOH HOH . G 6 HOH A 78 378 173 HOH HOH . G 6 HOH A 79 379 175 HOH HOH . G 6 HOH A 80 380 188 HOH HOH . G 6 HOH A 81 381 257 HOH HOH . G 6 HOH A 82 382 239 HOH HOH . G 6 HOH A 83 383 151 HOH HOH . G 6 HOH A 84 384 254 HOH HOH . G 6 HOH A 85 385 230 HOH HOH . G 6 HOH A 86 386 142 HOH HOH . G 6 HOH A 87 387 193 HOH HOH . G 6 HOH A 88 388 165 HOH HOH . G 6 HOH A 89 389 249 HOH HOH . G 6 HOH A 90 390 208 HOH HOH . G 6 HOH A 91 391 185 HOH HOH . G 6 HOH A 92 392 243 HOH HOH . G 6 HOH A 93 393 225 HOH HOH . G 6 HOH A 94 394 213 HOH HOH . G 6 HOH A 95 395 228 HOH HOH . G 6 HOH A 96 396 216 HOH HOH . G 6 HOH A 97 397 226 HOH HOH . G 6 HOH A 98 398 259 HOH HOH . G 6 HOH A 99 399 176 HOH HOH . G 6 HOH A 100 400 191 HOH HOH . G 6 HOH A 101 401 218 HOH HOH . G 6 HOH A 102 402 232 HOH HOH . G 6 HOH A 103 403 237 HOH HOH . G 6 HOH A 104 404 234 HOH HOH . G 6 HOH A 105 405 260 HOH HOH . G 6 HOH A 106 406 209 HOH HOH . G 6 HOH A 107 407 255 HOH HOH . G 6 HOH A 108 408 157 HOH HOH . G 6 HOH A 109 409 167 HOH HOH . G 6 HOH A 110 410 219 HOH HOH . G 6 HOH A 111 411 172 HOH HOH . G 6 HOH A 112 412 215 HOH HOH . G 6 HOH A 113 413 250 HOH HOH . G 6 HOH A 114 414 196 HOH HOH . G 6 HOH A 115 415 204 HOH HOH . G 6 HOH A 116 416 195 HOH HOH . G 6 HOH A 117 417 206 HOH HOH . G 6 HOH A 118 418 222 HOH HOH . G 6 HOH A 119 419 246 HOH HOH . G 6 HOH A 120 420 212 HOH HOH . G 6 HOH A 121 421 253 HOH HOH . G 6 HOH A 122 422 248 HOH HOH . G 6 HOH A 123 423 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 33.521 72.571 57.979 0.35 16.04 ? P PO4 202 A 1 HETATM 2 O O1 PO4 . . . C 2 32.908 73.374 56.855 0.35 16.56 ? O1 PO4 202 A 1 HETATM 3 O O2 PO4 . . . C 2 32.505 72.51 59.094 0.35 15.58 ? O2 PO4 202 A 1 HETATM 4 O O3 PO4 . . . C 2 34.753 73.334 58.425 0.35 16.2 ? O3 PO4 202 A 1 HETATM 5 O O4 PO4 . . . C 2 33.857 71.163 57.528 0.35 16.77 ? O4 PO4 202 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #