data_6ZMC
#
_model_server_result.job_id            -vBHUkhIQN7mavyddWDUwQ 
_model_server_result.datetime_utc      '2024-10-10 01:17:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zmc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":305}' 
#
_entry.id    6ZMC 
#
_exptl.entry_id    6ZMC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              106.12 
_entity.id                          8 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DI(HYDROXYETHYL)ETHER 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.36 
_cell.angle_gamma         90 
_cell.entry_id            6ZMC 
_cell.length_a            117.388 
_cell.length_b            51.909 
_cell.length_c            78.978 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZMC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      8 
_struct_asym.id                             O 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O ASP 7 B ASP 8 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc2 A O LEU 10 B LEU 11 1_555 F CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? 
metalc ? metalc3 A OE1 GLU 37 B GLU 38 1_555 C FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? 
metalc ? metalc4 A OE1 GLU 68 B GLU 69 1_555 C FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc5 A OE2 GLU 68 B GLU 69 1_555 D FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc6 A ND1 HIS 71 B HIS 72 1_555 C FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? 
metalc ? metalc7 A O GLY 83 B GLY 84 1_555 G CA CA . B CA 305 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.836 ? 
metalc ? metalc8 A OE1 GLU 121 B GLU 122 1_555 D FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? 
metalc ? metalc9 A OE2 GLU 150 B GLU 151 1_555 D FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? 
metalc ? metalc10 A ND1 HIS 153 B HIS 154 1_555 D FE FE . B FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? 
metalc ? metalc11 C FE FE . B FE 301 1_555 H O3 TRS . B TRS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc12 C FE FE . B FE 301 1_555 P O HOH . B HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc13 C FE FE . B FE 301 1_555 P O HOH . B HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc14 D FE FE . B FE 302 1_555 H O3 TRS . B TRS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc15 D FE FE . B FE 302 1_555 P O HOH . B HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? 
metalc ? metalc16 F CA CA . B CA 304 1_555 P O HOH . B HOH 411 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc17 F CA CA . B CA 304 3_445 B O ASP 7 C ASP 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc18 F CA CA . B CA 304 3_445 B O LEU 10 C LEU 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc19 F CA CA . B CA 304 1_555 Q O HOH . C HOH 407 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc20 G CA CA . B CA 305 1_555 P O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.849 ? 
metalc ? metalc21 G CA CA . B CA 305 1_555 P O HOH . B HOH 405 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc22 G CA CA . B CA 305 1_555 P O HOH . B HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? 
metalc ? metalc23 G CA CA . B CA 305 1_555 P O HOH . B HOH 410 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc24 B OE1 GLU 37 C GLU 38 1_555 K FE FE . C FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc25 B OE1 GLU 68 C GLU 69 1_555 K FE FE . C FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc26 B OE2 GLU 68 C GLU 69 1_555 L FE FE . C FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc27 B ND1 HIS 71 C HIS 72 1_555 K FE FE . C FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc28 B OE1 GLU 121 C GLU 122 1_555 L FE FE . C FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? 
metalc ? metalc29 B OE2 GLU 150 C GLU 151 1_555 L FE FE . C FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc30 B ND1 HIS 153 C HIS 154 1_555 L FE FE . C FE 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc31 K FE FE . C FE 301 1_555 M O1 TRS . C TRS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc32 K FE FE . C FE 301 1_555 Q O HOH . C HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
metalc ? metalc33 K FE FE . C FE 301 1_555 Q O HOH . C HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc34 L FE FE . C FE 302 1_555 M O1 TRS . C TRS 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? 
metalc ? metalc35 L FE FE . C FE 302 1_555 Q O HOH . C HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? 
metalc ? metalc36 L FE FE . C FE 302 1_555 Q O HOH . C HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? 
#
_chem_comp.formula           'C4 H10 O3' 
_chem_comp.formula_weight    106.12 
_chem_comp.id                PEG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DI(HYDROXYETHYL)ETHER 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 PEG sing 237 n n 
C1 C2 PEG sing 238 n n 
C1 H11 PEG sing 239 n n 
C1 H12 PEG sing 240 n n 
O1 HO1 PEG sing 241 n n 
C2 O2 PEG sing 242 n n 
C2 H21 PEG sing 243 n n 
C2 H22 PEG sing 244 n n 
O2 C3 PEG sing 245 n n 
C3 C4 PEG sing 246 n n 
C3 H31 PEG sing 247 n n 
C3 H32 PEG sing 248 n n 
C4 O4 PEG sing 249 n n 
C4 H41 PEG sing 250 n n 
C4 H42 PEG sing 251 n n 
O4 HO4 PEG sing 252 n n 
#
_atom_sites.entry_id                     6ZMC 
_atom_sites.fract_transf_matrix[1][1]    0.008519 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000054 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019264 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012662 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FE B 1 301 301 FE FE . 
D 2 FE B 1 302 302 FE FE . 
E 3 CL B 1 303 3 CL CL . 
F 4 CA B 1 304 1 CA CA . 
G 4 CA B 1 305 2 CA CA . 
H 5 TRS B 1 306 2 TRS TRS . 
I 6 PG4 B 1 307 1 PG4 PG4 . 
J 6 PG4 B 1 308 2 PG4 PG4 . 
K 2 FE C 1 301 301 FE FE . 
L 2 FE C 1 302 302 FE FE . 
M 5 TRS C 1 303 1 TRS TRS . 
N 7 AR C 1 304 1 AR AR . 
O 8 PEG C 1 305 2 PEG PEG . 
P 9 HOH B 1 401 30 HOH HOH . 
P 9 HOH B 2 402 3 HOH HOH . 
P 9 HOH B 3 403 295 HOH HOH . 
P 9 HOH B 4 404 139 HOH HOH . 
P 9 HOH B 5 405 274 HOH HOH . 
P 9 HOH B 6 406 23 HOH HOH . 
P 9 HOH B 7 407 96 HOH HOH . 
P 9 HOH B 8 408 229 HOH HOH . 
P 9 HOH B 9 409 301 HOH HOH . 
P 9 HOH B 10 410 38 HOH HOH . 
P 9 HOH B 11 411 5 HOH HOH . 
P 9 HOH B 12 412 1 HOH HOH . 
P 9 HOH B 13 413 32 HOH HOH . 
P 9 HOH B 14 414 189 HOH HOH . 
P 9 HOH B 15 415 102 HOH HOH . 
P 9 HOH B 16 416 298 HOH HOH . 
P 9 HOH B 17 417 263 HOH HOH . 
P 9 HOH B 18 418 294 HOH HOH . 
P 9 HOH B 19 419 280 HOH HOH . 
P 9 HOH B 20 420 206 HOH HOH . 
P 9 HOH B 21 421 284 HOH HOH . 
P 9 HOH B 22 422 135 HOH HOH . 
Q 9 HOH C 1 401 283 HOH HOH . 
Q 9 HOH C 2 402 9 HOH HOH . 
Q 9 HOH C 3 403 304 HOH HOH . 
Q 9 HOH C 4 404 302 HOH HOH . 
Q 9 HOH C 5 405 6 HOH HOH . 
Q 9 HOH C 6 406 72 HOH HOH . 
Q 9 HOH C 7 407 4 HOH HOH . 
Q 9 HOH C 8 408 40 HOH HOH . 
Q 9 HOH C 9 409 58 HOH HOH . 
Q 9 HOH C 10 410 116 HOH HOH . 
Q 9 HOH C 11 411 59 HOH HOH . 
Q 9 HOH C 12 412 11 HOH HOH . 
Q 9 HOH C 13 413 198 HOH HOH . 
Q 9 HOH C 14 414 288 HOH HOH . 
Q 9 HOH C 15 415 287 HOH HOH . 
Q 9 HOH C 16 416 71 HOH HOH . 
Q 9 HOH C 17 417 7 HOH HOH . 
Q 9 HOH C 18 418 68 HOH HOH . 
Q 9 HOH C 19 419 43 HOH HOH . 
Q 9 HOH C 20 420 279 HOH HOH . 
Q 9 HOH C 21 421 291 HOH HOH . 
Q 9 HOH C 22 422 199 HOH HOH . 
Q 9 HOH C 23 423 289 HOH HOH . 
Q 9 HOH C 24 424 299 HOH HOH . 
Q 9 HOH C 25 425 300 HOH HOH . 
Q 9 HOH C 26 426 187 HOH HOH . 
Q 9 HOH C 27 427 306 HOH HOH . 
Q 9 HOH C 28 428 303 HOH HOH . 
Q 9 HOH C 29 429 188 HOH HOH . 
Q 9 HOH C 30 430 305 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PEG . . . O 8 -21.594 -36.798 -38.344 1 96.09 ? C1 PEG 305 C 1 
HETATM 2 O O1 PEG . . . O 8 -22.219 -38.055 -38.559 1 91.19 ? O1 PEG 305 C 1 
HETATM 3 C C2 PEG . . . O 8 -21.73 -36.298 -36.917 1 92.43 ? C2 PEG 305 C 1 
HETATM 4 O O2 PEG . . . O 8 -20.695 -36.851 -36.107 1 97.47 ? O2 PEG 305 C 1 
HETATM 5 C C3 PEG . . . O 8 -20.694 -36.386 -34.761 1 98.87 ? C3 PEG 305 C 1 
HETATM 6 C C4 PEG . . . O 8 -19.751 -37.225 -33.92 1 103.4 ? C4 PEG 305 C 1 
HETATM 7 O O4 PEG . . . O 8 -18.363 -37.037 -34.246 1 92.19 ? O4 PEG 305 C 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          19 
_model_server_stats.element_count           7 
#