data_6ZMJ # _model_server_result.job_id d0o1Wfv7WNucrNHlOXw0qg _model_server_result.datetime_utc '2024-11-24 11:53:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":701}' # _entry.id 6ZMJ # _exptl.entry_id 6ZMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description GLUCOSE-6-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZMJ _cell.length_a 152.766 _cell.length_b 152.766 _cell.length_c 164.81 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G6Q _chem_comp.mon_nstd_flag . _chem_comp.name GLUCOSE-6-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6Q sing 83 n n C1 O1 G6Q doub 84 n n C1 H1 G6Q sing 85 n n C2 C3 G6Q sing 86 n n C2 O2 G6Q sing 87 n n C2 H2 G6Q sing 88 n n C3 C4 G6Q sing 89 n n C3 O3 G6Q sing 90 n n C3 H3 G6Q sing 91 n n C4 C5 G6Q sing 92 n n C4 O4 G6Q sing 93 n n C4 H4 G6Q sing 94 n n C5 C6 G6Q sing 95 n n C5 O5 G6Q sing 96 n n C5 H5 G6Q sing 97 n n C6 O6 G6Q sing 98 n n C6 H61 G6Q sing 99 n n C6 H62 G6Q sing 100 n n O2 HO2 G6Q sing 101 n n O3 HO3 G6Q sing 102 n n O4 HO4 G6Q sing 103 n n O5 HO5 G6Q sing 104 n n O6 P G6Q sing 105 n n P O1P G6Q doub 106 n n P O2P G6Q sing 107 n n P O3P G6Q sing 108 n n O2P HOP2 G6Q sing 109 n n O3P HOP3 G6Q sing 110 n n # _atom_sites.entry_id 6ZMJ _atom_sites.fract_transf_matrix[1][1] 0.006546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G6Q A 1 701 1 G6Q G6Q . D 3 GLU A 1 702 1 GLU GLU . E 2 G6Q B 1 701 2 G6Q G6Q . F 4 HOH A 1 801 1 HOH HOH . F 4 HOH A 2 802 9 HOH HOH . F 4 HOH A 3 803 5 HOH HOH . F 4 HOH A 4 804 8 HOH HOH . F 4 HOH A 5 805 3 HOH HOH . F 4 HOH A 6 806 15 HOH HOH . F 4 HOH A 7 807 4 HOH HOH . F 4 HOH A 8 808 7 HOH HOH . F 4 HOH A 9 809 13 HOH HOH . F 4 HOH A 10 810 17 HOH HOH . F 4 HOH A 11 811 29 HOH HOH . F 4 HOH A 12 812 44 HOH HOH . G 4 HOH B 1 801 56 HOH HOH . G 4 HOH B 2 802 6 HOH HOH . G 4 HOH B 3 803 11 HOH HOH . G 4 HOH B 4 804 12 HOH HOH . G 4 HOH B 5 805 19 HOH HOH . G 4 HOH B 6 806 14 HOH HOH . G 4 HOH B 7 807 10 HOH HOH . G 4 HOH B 8 808 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6Q . . . E 2 0.467 36.98 -17.089 1 57.31 ? C1 G6Q 701 B 1 HETATM 2 C C2 G6Q . . . E 2 -0.557 36.081 -16.388 1 53.09 ? C2 G6Q 701 B 1 HETATM 3 C C3 G6Q . . . E 2 -1.92 36.337 -17.068 1 51.7 ? C3 G6Q 701 B 1 HETATM 4 C C4 G6Q . . . E 2 -2.933 35.208 -16.87 1 53.77 ? C4 G6Q 701 B 1 HETATM 5 C C5 G6Q . . . E 2 -4.371 35.718 -16.769 1 57.33 ? C5 G6Q 701 B 1 HETATM 6 C C6 G6Q . . . E 2 -5.345 34.649 -16.324 1 60.19 ? C6 G6Q 701 B 1 HETATM 7 O O1 G6Q . . . E 2 1.572 36.573 -17.284 1 61.37 ? O1 G6Q 701 B 1 HETATM 8 O O2 G6Q . . . E 2 -0.119 34.722 -16.429 1 53.91 ? O2 G6Q 701 B 1 HETATM 9 O O3 G6Q . . . E 2 -1.73 36.565 -18.459 1 52.82 ? O3 G6Q 701 B 1 HETATM 10 O O4 G6Q . . . E 2 -2.853 34.31 -17.97 1 51.86 ? O4 G6Q 701 B 1 HETATM 11 O O5 G6Q . . . E 2 -4.421 36.817 -15.86 1 64.68 ? O5 G6Q 701 B 1 HETATM 12 O O6 G6Q . . . E 2 -4.968 33.393 -16.925 1 59.77 ? O6 G6Q 701 B 1 HETATM 13 P P G6Q . . . E 2 -5.319 32.012 -16.174 1 53.57 ? P G6Q 701 B 1 HETATM 14 O O1P G6Q . . . E 2 -4.736 30.874 -16.932 1 57.25 ? O1P G6Q 701 B 1 HETATM 15 O O2P G6Q . . . E 2 -4.765 32.132 -14.757 1 63.46 ? O2P G6Q 701 B 1 HETATM 16 O O3P G6Q . . . E 2 -6.843 31.951 -16.068 1 45.45 ? O3P G6Q 701 B 1 HETATM 17 H H1 G6Q . . . E 2 0.13 37.973 -17.382 1 68.73 ? H1 G6Q 701 B 1 HETATM 18 H H2 G6Q . . . E 2 -0.602 36.29 -15.32 1 63.67 ? H2 G6Q 701 B 1 HETATM 19 H H3 G6Q . . . E 2 -2.329 37.283 -16.717 1 62 ? H3 G6Q 701 B 1 HETATM 20 H H4 G6Q . . . E 2 -2.653 34.594 -16.015 1 64.48 ? H4 G6Q 701 B 1 HETATM 21 H H5 G6Q . . . E 2 -4.69 36.189 -17.697 1 68.75 ? H5 G6Q 701 B 1 HETATM 22 H H61 G6Q . . . E 2 -5.336 34.495 -15.246 1 72.19 ? H61 G6Q 701 B 1 HETATM 23 H H62 G6Q . . . E 2 -6.372 34.888 -16.597 1 72.19 ? H62 G6Q 701 B 1 HETATM 24 H HO2 G6Q . . . E 2 -0.282 34.371 -17.344 1 64.66 ? HO2 G6Q 701 B 1 HETATM 25 H HO3 G6Q . . . E 2 -1.902 37.525 -18.647 1 63.34 ? HO3 G6Q 701 B 1 HETATM 26 H HO4 G6Q . . . E 2 -2.195 33.599 -17.752 1 62.2 ? HO4 G6Q 701 B 1 HETATM 27 H HO5 G6Q . . . E 2 -4.221 36.478 -14.948 1 77.58 ? HO5 G6Q 701 B 1 HETATM 28 H HOP2 G6Q . . . E 2 -4.494 31.335 -14.231 1 76.11 ? HOP2 G6Q 701 B 1 HETATM 29 H HOP3 G6Q . . . E 2 -7.355 31.93 -15.218 1 54.49 ? HOP3 G6Q 701 B 1 # _model_server_stats.io_time_ms 100 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 29 #