data_6ZMJ # _model_server_result.job_id pp5HuCbUp8HOGzGkOg5L6w _model_server_result.datetime_utc '2024-11-08 04:04:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zmj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 6ZMJ # _exptl.entry_id 6ZMJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 147.129 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GLUTAMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZMJ _cell.length_a 152.766 _cell.length_b 152.766 _cell.length_c 164.81 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZMJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O4' _chem_comp.formula_weight 147.129 _chem_comp.id GLU _chem_comp.mon_nstd_flag y _chem_comp.name 'GLUTAMIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA GLU sing 130 n n N H GLU sing 131 n n N H2 GLU sing 132 n n CA C GLU sing 133 n n CA CB GLU sing 134 n n CA HA GLU sing 135 n n C O GLU doub 136 n n C OXT GLU sing 137 n n CB CG GLU sing 138 n n CB HB2 GLU sing 139 n n CB HB3 GLU sing 140 n n CG CD GLU sing 141 n n CG HG2 GLU sing 142 n n CG HG3 GLU sing 143 n n CD OE1 GLU doub 144 n n CD OE2 GLU sing 145 n n OE2 HE2 GLU sing 146 n n OXT HXT GLU sing 147 n n # _atom_sites.entry_id 6ZMJ _atom_sites.fract_transf_matrix[1][1] 0.006546 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006546 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006068 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 G6Q A 1 701 1 G6Q G6Q . D 3 GLU A 1 702 1 GLU GLU . E 2 G6Q B 1 701 2 G6Q G6Q . F 4 HOH A 1 801 1 HOH HOH . F 4 HOH A 2 802 9 HOH HOH . F 4 HOH A 3 803 5 HOH HOH . F 4 HOH A 4 804 8 HOH HOH . F 4 HOH A 5 805 3 HOH HOH . F 4 HOH A 6 806 15 HOH HOH . F 4 HOH A 7 807 4 HOH HOH . F 4 HOH A 8 808 7 HOH HOH . F 4 HOH A 9 809 13 HOH HOH . F 4 HOH A 10 810 17 HOH HOH . F 4 HOH A 11 811 29 HOH HOH . F 4 HOH A 12 812 44 HOH HOH . G 4 HOH B 1 801 56 HOH HOH . G 4 HOH B 2 802 6 HOH HOH . G 4 HOH B 3 803 11 HOH HOH . G 4 HOH B 4 804 12 HOH HOH . G 4 HOH B 5 805 19 HOH HOH . G 4 HOH B 6 806 14 HOH HOH . G 4 HOH B 7 807 10 HOH HOH . G 4 HOH B 8 808 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N GLU . . . D 3 13.132 47.153 -61.672 1 79.36 ? N GLU 702 A 1 HETATM 2 C CA GLU . . . D 3 13.212 48.43 -62.442 1 84.03 ? CA GLU 702 A 1 HETATM 3 C C GLU . . . D 3 14.322 49.324 -61.9 1 84.44 ? C GLU 702 A 1 HETATM 4 O O GLU . . . D 3 14.879 50.15 -62.623 1 82.7 ? O GLU 702 A 1 HETATM 5 C CB GLU . . . D 3 11.871 49.17 -62.401 1 85.53 ? CB GLU 702 A 1 HETATM 6 C CG GLU . . . D 3 11.325 49.419 -61.001 1 84.84 ? CG GLU 702 A 1 HETATM 7 C CD GLU . . . D 3 10.081 50.287 -61.007 1 83.38 ? CD GLU 702 A 1 HETATM 8 O OE1 GLU . . . D 3 10.187 51.478 -61.368 1 78.94 ? OE1 GLU 702 A 1 HETATM 9 O OE2 GLU . . . D 3 8.996 49.774 -60.66 1 85.03 ? OE2 GLU 702 A 1 HETATM 10 O OXT GLU . . . D 3 14.688 49.242 -60.727 1 83.34 ? OXT GLU 702 A 1 HETATM 11 H H1 GLU . . . D 3 12.306 47.048 -61.357 1 95.19 ? H1 GLU 702 A 1 HETATM 12 H H2 GLU . . . D 3 13.335 46.471 -62.206 1 95.19 ? H2 GLU 702 A 1 HETATM 13 H H3 GLU . . . D 3 13.707 47.179 -60.993 1 95.19 ? H3 GLU 702 A 1 HETATM 14 H HA GLU . . . D 3 13.415 48.227 -63.369 1 100.8 ? HA GLU 702 A 1 HETATM 15 H HB2 GLU . . . D 3 11.981 50.033 -62.831 1 102.6 ? HB2 GLU 702 A 1 HETATM 16 H HB3 GLU . . . D 3 11.213 48.646 -62.885 1 102.6 ? HB3 GLU 702 A 1 HETATM 17 H HG2 GLU . . . D 3 11.096 48.568 -60.594 1 101.76 ? HG2 GLU 702 A 1 HETATM 18 H HG3 GLU . . . D 3 12.002 49.868 -60.472 1 101.76 ? HG3 GLU 702 A 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #