data_6ZMQ # _model_server_result.job_id QgLqUw-eSQ2XiaJuP69RnQ _model_server_result.datetime_utc '2024-11-04 22:37:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zmq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":702}' # _entry.id 6ZMQ # _exptl.entry_id 6ZMQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZMQ _cell.length_a 68.72 _cell.length_b 128.27 _cell.length_c 134.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZMQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 276 A HIS 259 1_555 B FE HEM . A HEM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A NE2 HIS 510 A HIS 493 1_555 B FE HEM . A HEM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 263 n n C1B O1B LMT sing 264 n n C1B O5B LMT sing 265 n n C1B H1B LMT sing 266 n n C2B C3B LMT sing 267 n n C2B O2B LMT sing 268 n n C2B H2B LMT sing 269 n n C3B C4B LMT sing 270 n n C3B O3B LMT sing 271 n n C3B H3B LMT sing 272 n n C4B C5B LMT sing 273 n n C4B O4' LMT sing 274 n n C4B H4B LMT sing 275 n n C5B C6B LMT sing 276 n n C5B O5B LMT sing 277 n n C5B H5B LMT sing 278 n n C6B O6B LMT sing 279 n n C6B "H6'2" LMT sing 280 n n C6B "H6'1" LMT sing 281 n n O1B C4' LMT sing 282 n n O2B H2O1 LMT sing 283 n n O3B H3O1 LMT sing 284 n n O4' H4O1 LMT sing 285 n n O6B H6B LMT sing 286 n n C1' C2' LMT sing 287 n n C1' O1' LMT sing 288 n n C1' O5' LMT sing 289 n n C1' H1' LMT sing 290 n n C2' C3' LMT sing 291 n n C2' O2' LMT sing 292 n n C2' H2' LMT sing 293 n n C3' C4' LMT sing 294 n n C3' O3' LMT sing 295 n n C3' H3' LMT sing 296 n n C4' C5' LMT sing 297 n n C4' H4' LMT sing 298 n n C5' C6' LMT sing 299 n n C5' O5' LMT sing 300 n n C5' H5' LMT sing 301 n n C6' O6' LMT sing 302 n n C6' H6D LMT sing 303 n n C6' H6E LMT sing 304 n n O1' C1 LMT sing 305 n n O2' H2O2 LMT sing 306 n n O3' H3O2 LMT sing 307 n n O6' H6' LMT sing 308 n n C1 C2 LMT sing 309 n n C1 H12 LMT sing 310 n n C1 H11 LMT sing 311 n n C2 C3 LMT sing 312 n n C2 H22 LMT sing 313 n n C2 H21 LMT sing 314 n n C3 C4 LMT sing 315 n n C3 H32 LMT sing 316 n n C3 H31 LMT sing 317 n n C4 C5 LMT sing 318 n n C4 H42 LMT sing 319 n n C4 H41 LMT sing 320 n n C5 C6 LMT sing 321 n n C5 H52 LMT sing 322 n n C5 H51 LMT sing 323 n n C6 C7 LMT sing 324 n n C6 H62 LMT sing 325 n n C6 H61 LMT sing 326 n n C7 C8 LMT sing 327 n n C7 H72 LMT sing 328 n n C7 H71 LMT sing 329 n n C8 C9 LMT sing 330 n n C8 H82 LMT sing 331 n n C8 H81 LMT sing 332 n n C9 C10 LMT sing 333 n n C9 H92 LMT sing 334 n n C9 H91 LMT sing 335 n n C10 C11 LMT sing 336 n n C10 H102 LMT sing 337 n n C10 H101 LMT sing 338 n n C11 C12 LMT sing 339 n n C11 H112 LMT sing 340 n n C11 H111 LMT sing 341 n n C12 H123 LMT sing 342 n n C12 H122 LMT sing 343 n n C12 H121 LMT sing 344 n n # _atom_sites.entry_id 6ZMQ _atom_sites.fract_transf_matrix[1][1] 0.014552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 701 650 HEM HEM . C 3 LMT A 1 702 670 LMT LMT . D 3 LMT A 1 703 671 LMT LMT . E 4 PTY A 1 704 701 PTY PTY . F 4 PTY A 1 705 702 PTY PTY . G 4 PTY A 1 706 703 PTY PTY . H 4 PTY A 1 707 704 PTY PTY . I 5 HOH A 1 801 766 HOH HOH . I 5 HOH A 2 802 758 HOH HOH . I 5 HOH A 3 803 753 HOH HOH . I 5 HOH A 4 804 759 HOH HOH . I 5 HOH A 5 805 770 HOH HOH . I 5 HOH A 6 806 757 HOH HOH . I 5 HOH A 7 807 752 HOH HOH . I 5 HOH A 8 808 764 HOH HOH . I 5 HOH A 9 809 771 HOH HOH . I 5 HOH A 10 810 760 HOH HOH . I 5 HOH A 11 811 761 HOH HOH . I 5 HOH A 12 812 769 HOH HOH . I 5 HOH A 13 813 755 HOH HOH . I 5 HOH A 14 814 765 HOH HOH . I 5 HOH A 15 815 751 HOH HOH . I 5 HOH A 16 816 768 HOH HOH . I 5 HOH A 17 817 767 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . C 3 -6.578 18.162 137.25 0.88 93.19 ? C1B LMT 702 A 1 HETATM 2 C C2B LMT . . . C 3 -7.033 17.879 138.714 0.88 94.37 ? C2B LMT 702 A 1 HETATM 3 C C3B LMT . . . C 3 -8.523 18.195 138.973 0.88 93.1 ? C3B LMT 702 A 1 HETATM 4 C C4B LMT . . . C 3 -8.939 19.491 138.266 0.88 82.82 ? C4B LMT 702 A 1 HETATM 5 C C5B LMT . . . C 3 -8.831 19.156 136.773 0.88 80.8 ? C5B LMT 702 A 1 HETATM 6 C C6B LMT . . . C 3 -9.13 20.407 135.966 0.88 77.81 ? C6B LMT 702 A 1 HETATM 7 O O1B LMT . . . C 3 -5.943 16.995 136.805 0.88 95.83 ? O1B LMT 702 A 1 HETATM 8 O O2B LMT . . . C 3 -6.804 16.549 138.94 0.88 96.15 ? O2B LMT 702 A 1 HETATM 9 O O3B LMT . . . C 3 -8.813 18.207 140.31 0.88 94.87 ? O3B LMT 702 A 1 HETATM 10 O O4' LMT . . . C 3 -10.238 19.825 138.57 0.88 73.67 ? O4' LMT 702 A 1 HETATM 11 O O5B LMT . . . C 3 -7.609 18.517 136.335 0.88 87.02 ? O5B LMT 702 A 1 HETATM 12 O O6B LMT . . . C 3 -10.407 20.823 136.235 0.88 74.98 ? O6B LMT 702 A 1 HETATM 13 C C1' LMT . . . C 3 -3.318 16.678 138.878 0.88 93.01 ? C1' LMT 702 A 1 HETATM 14 C C2' LMT . . . C 3 -2.69 17.803 138.023 0.88 93.58 ? C2' LMT 702 A 1 HETATM 15 C C3' LMT . . . C 3 -3.676 18.14 136.847 0.88 97.21 ? C3' LMT 702 A 1 HETATM 16 C C4' LMT . . . C 3 -4.591 16.96 136.328 0.88 95.36 ? C4' LMT 702 A 1 HETATM 17 C C5' LMT . . . C 3 -3.998 15.561 136.777 0.88 91.22 ? C5' LMT 702 A 1 HETATM 18 C C6' LMT . . . C 3 -3.107 14.868 135.762 0.88 77.59 ? C6' LMT 702 A 1 HETATM 19 O O1' LMT . . . C 3 -2.585 16.394 139.999 0.88 82.63 ? O1' LMT 702 A 1 HETATM 20 O O2' LMT . . . C 3 -2.475 18.914 138.796 0.88 92.25 ? O2' LMT 702 A 1 HETATM 21 O O3' LMT . . . C 3 -2.986 18.667 135.793 0.88 98.22 ? O3' LMT 702 A 1 HETATM 22 O O5' LMT . . . C 3 -3.382 15.482 138.083 0.88 96.66 ? O5' LMT 702 A 1 HETATM 23 O O6' LMT . . . C 3 -3.235 15.539 134.571 0.88 71.3 ? O6' LMT 702 A 1 HETATM 24 C C1 LMT . . . C 3 -3.371 15.941 141.089 0.88 64.72 ? C1 LMT 702 A 1 HETATM 25 C C2 LMT . . . C 3 -2.406 15.45 142.136 0.88 51.51 ? C2 LMT 702 A 1 HETATM 26 C C3 LMT . . . C 3 -2.3 16.262 143.392 0.88 47.54 ? C3 LMT 702 A 1 HETATM 27 C C4 LMT . . . C 3 -2.789 15.443 144.568 0.88 46.37 ? C4 LMT 702 A 1 HETATM 28 C C5 LMT . . . C 3 -1.88 15.631 145.746 0.88 49.4 ? C5 LMT 702 A 1 HETATM 29 C C6 LMT . . . C 3 -2.394 14.99 146.996 0.88 52.98 ? C6 LMT 702 A 1 HETATM 30 C C7 LMT . . . C 3 -3.294 15.947 147.726 0.88 64.44 ? C7 LMT 702 A 1 HETATM 31 C C8 LMT . . . C 3 -2.979 15.898 149.181 0.88 59.45 ? C8 LMT 702 A 1 HETATM 32 C C9 LMT . . . C 3 -3.656 16.954 149.99 0.88 51.87 ? C9 LMT 702 A 1 HETATM 33 C C10 LMT . . . C 3 -2.698 17.365 151.068 0.88 49.34 ? C10 LMT 702 A 1 HETATM 34 C C11 LMT . . . C 3 -2.111 18.71 150.787 0.88 45.1 ? C11 LMT 702 A 1 HETATM 35 C C12 LMT . . . C 3 -1.087 19.084 151.809 0.88 44.39 ? C12 LMT 702 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #