data_6ZMQ # _model_server_result.job_id uc8s7fCqorMeRdOrZpkEFw _model_server_result.datetime_utc '2024-11-04 22:36:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zmq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":705}' # _entry.id 6ZMQ # _exptl.entry_id 6ZMQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 734.039 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZMQ _cell.length_a 68.72 _cell.length_b 128.27 _cell.length_c 134.98 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZMQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 276 A HIS 259 1_555 B FE HEM . A HEM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc2 A NE2 HIS 510 A HIS 493 1_555 B FE HEM . A HEM 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 428 n n C1 C6 PTY sing 429 n n C1 HC11 PTY sing 430 n n C1 HC12 PTY sing 431 n n C2 C3 PTY sing 432 n n C2 N1 PTY sing 433 n n C2 HC21 PTY sing 434 n n C2 HC22 PTY sing 435 n n C3 O11 PTY sing 436 n n C3 HC31 PTY sing 437 n n C3 HC32 PTY sing 438 n n O4 C30 PTY sing 439 n n C5 C6 PTY sing 440 n n C5 O14 PTY sing 441 n n C5 HC51 PTY sing 442 n n C5 HC52 PTY sing 443 n n C6 O7 PTY sing 444 n n C6 HC6 PTY sing 445 n n O7 C8 PTY sing 446 n n C8 O10 PTY doub 447 n n C8 C11 PTY sing 448 n n C11 C12 PTY sing 449 n n C11 H111 PTY sing 450 n n C11 H112 PTY sing 451 n n C12 C13 PTY sing 452 n n C12 H121 PTY sing 453 n n C12 H122 PTY sing 454 n n C13 C14 PTY sing 455 n n C13 H131 PTY sing 456 n n C13 H132 PTY sing 457 n n C14 C15 PTY sing 458 n n C14 H141 PTY sing 459 n n C14 H142 PTY sing 460 n n C15 C16 PTY sing 461 n n C15 H151 PTY sing 462 n n C15 H152 PTY sing 463 n n C16 C17 PTY sing 464 n n C16 H161 PTY sing 465 n n C16 H162 PTY sing 466 n n C17 C18 PTY sing 467 n n C17 H171 PTY sing 468 n n C17 H172 PTY sing 469 n n C18 C19 PTY sing 470 n n C18 H181 PTY sing 471 n n C18 H182 PTY sing 472 n n C19 C20 PTY sing 473 n n C19 H191 PTY sing 474 n n C19 H192 PTY sing 475 n n C20 C21 PTY sing 476 n n C20 H201 PTY sing 477 n n C20 H202 PTY sing 478 n n C21 C22 PTY sing 479 n n C21 H211 PTY sing 480 n n C21 H212 PTY sing 481 n n C22 C23 PTY sing 482 n n C22 H221 PTY sing 483 n n C22 H222 PTY sing 484 n n C23 C24 PTY sing 485 n n C23 H231 PTY sing 486 n n C23 H232 PTY sing 487 n n C24 C25 PTY sing 488 n n C24 H241 PTY sing 489 n n C24 H242 PTY sing 490 n n C25 C26 PTY sing 491 n n C25 H251 PTY sing 492 n n C25 H252 PTY sing 493 n n C26 C27 PTY sing 494 n n C26 H261 PTY sing 495 n n C26 H262 PTY sing 496 n n C27 C28 PTY sing 497 n n C27 H271 PTY sing 498 n n C27 H272 PTY sing 499 n n C28 C29 PTY sing 500 n n C28 H281 PTY sing 501 n n C28 H282 PTY sing 502 n n C29 H291 PTY sing 503 n n C29 H292 PTY sing 504 n n C29 H293 PTY sing 505 n n C30 C31 PTY sing 506 n n C30 O30 PTY doub 507 n n C31 C32 PTY sing 508 n n C31 H311 PTY sing 509 n n C31 H312 PTY sing 510 n n C32 C33 PTY sing 511 n n C32 H321 PTY sing 512 n n C32 H322 PTY sing 513 n n C33 C34 PTY sing 514 n n C33 H331 PTY sing 515 n n C33 H332 PTY sing 516 n n C34 C35 PTY sing 517 n n C34 H341 PTY sing 518 n n C34 H342 PTY sing 519 n n C35 C36 PTY sing 520 n n C35 H351 PTY sing 521 n n C35 H352 PTY sing 522 n n C36 C37 PTY sing 523 n n C36 H361 PTY sing 524 n n C36 H362 PTY sing 525 n n C37 C38 PTY sing 526 n n C37 H371 PTY sing 527 n n C37 H372 PTY sing 528 n n C38 C39 PTY sing 529 n n C38 H381 PTY sing 530 n n C38 H382 PTY sing 531 n n C39 C40 PTY sing 532 n n C39 H391 PTY sing 533 n n C39 H392 PTY sing 534 n n C40 C41 PTY sing 535 n n C40 H401 PTY sing 536 n n C40 H402 PTY sing 537 n n C41 C42 PTY sing 538 n n C41 H411 PTY sing 539 n n C41 H412 PTY sing 540 n n C42 C43 PTY sing 541 n n C42 H421 PTY sing 542 n n C42 H422 PTY sing 543 n n C43 C44 PTY sing 544 n n C43 H431 PTY sing 545 n n C43 H432 PTY sing 546 n n C44 H441 PTY sing 547 n n C44 H442 PTY sing 548 n n C44 H443 PTY sing 549 n n P1 O11 PTY sing 550 n n P1 O12 PTY sing 551 n n P1 O13 PTY doub 552 n n P1 O14 PTY sing 553 n n O12 H12O PTY sing 554 n n N1 HN11 PTY sing 555 n n N1 HN12 PTY sing 556 n n # _atom_sites.entry_id 6ZMQ _atom_sites.fract_transf_matrix[1][1] 0.014552 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007409 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 701 650 HEM HEM . C 3 LMT A 1 702 670 LMT LMT . D 3 LMT A 1 703 671 LMT LMT . E 4 PTY A 1 704 701 PTY PTY . F 4 PTY A 1 705 702 PTY PTY . G 4 PTY A 1 706 703 PTY PTY . H 4 PTY A 1 707 704 PTY PTY . I 5 HOH A 1 801 766 HOH HOH . I 5 HOH A 2 802 758 HOH HOH . I 5 HOH A 3 803 753 HOH HOH . I 5 HOH A 4 804 759 HOH HOH . I 5 HOH A 5 805 770 HOH HOH . I 5 HOH A 6 806 757 HOH HOH . I 5 HOH A 7 807 752 HOH HOH . I 5 HOH A 8 808 764 HOH HOH . I 5 HOH A 9 809 771 HOH HOH . I 5 HOH A 10 810 760 HOH HOH . I 5 HOH A 11 811 761 HOH HOH . I 5 HOH A 12 812 769 HOH HOH . I 5 HOH A 13 813 755 HOH HOH . I 5 HOH A 14 814 765 HOH HOH . I 5 HOH A 15 815 751 HOH HOH . I 5 HOH A 16 816 768 HOH HOH . I 5 HOH A 17 817 767 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . F 4 -48.719 -8.698 152.001 1 49.19 ? C1 PTY 705 A 1 HETATM 2 C C2 PTY . . . F 4 -46.533 -8.7 159.183 1 53.77 ? C2 PTY 705 A 1 HETATM 3 C C3 PTY . . . F 4 -47.525 -9.662 158.529 1 61.05 ? C3 PTY 705 A 1 HETATM 4 O O4 PTY . . . F 4 -49.292 -8.326 150.781 1 43.94 ? O4 PTY 705 A 1 HETATM 5 C C5 PTY . . . F 4 -48.546 -10.613 153.647 1 59.72 ? C5 PTY 705 A 1 HETATM 6 C C6 PTY . . . F 4 -49.096 -10.147 152.292 1 61.84 ? C6 PTY 705 A 1 HETATM 7 O O7 PTY . . . F 4 -48.526 -10.927 151.275 1 82.66 ? O7 PTY 705 A 1 HETATM 8 C C8 PTY . . . F 4 -49.335 -11.897 150.663 1 85.29 ? C8 PTY 705 A 1 HETATM 9 O O10 PTY . . . F 4 -50.01 -12.621 151.317 1 87.46 ? O10 PTY 705 A 1 HETATM 10 C C11 PTY . . . F 4 -49.332 -12.028 149.136 1 76.96 ? C11 PTY 705 A 1 HETATM 11 C C12 PTY . . . F 4 -50.469 -12.945 148.681 1 55.14 ? C12 PTY 705 A 1 HETATM 12 C C13 PTY . . . F 4 -50.525 -13.073 147.155 1 48.03 ? C13 PTY 705 A 1 HETATM 13 C C14 PTY . . . F 4 -49.239 -13.705 146.618 1 46.47 ? C14 PTY 705 A 1 HETATM 14 C C15 PTY . . . F 4 -49.444 -14.2 145.185 1 45.12 ? C15 PTY 705 A 1 HETATM 15 C C16 PTY . . . F 4 -48.085 -14.223 144.485 1 47.75 ? C16 PTY 705 A 1 HETATM 16 C C17 PTY . . . F 4 -48.242 -14.051 142.971 1 49.73 ? C17 PTY 705 A 1 HETATM 17 C C18 PTY . . . F 4 -47.762 -12.688 142.445 1 54 ? C18 PTY 705 A 1 HETATM 18 C C19 PTY . . . F 4 -46.557 -12.111 143.196 1 61.91 ? C19 PTY 705 A 1 HETATM 19 C C20 PTY . . . F 4 -45.57 -11.45 142.228 1 70.11 ? C20 PTY 705 A 1 HETATM 20 C C21 PTY . . . F 4 -46.146 -10.165 141.624 1 70.66 ? C21 PTY 705 A 1 HETATM 21 C C22 PTY . . . F 4 -45.114 -9.552 140.67 1 70.66 ? C22 PTY 705 A 1 HETATM 22 C C23 PTY . . . F 4 -45.295 -8.038 140.517 1 68.84 ? C23 PTY 705 A 1 HETATM 23 C C24 PTY . . . F 4 -45.876 -7.727 139.132 1 58.17 ? C24 PTY 705 A 1 HETATM 24 C C25 PTY . . . F 4 -45.091 -6.594 138.463 1 40.61 ? C25 PTY 705 A 1 HETATM 25 C C26 PTY . . . F 4 -45.499 -6.451 136.995 1 35.34 ? C26 PTY 705 A 1 HETATM 26 C C27 PTY . . . F 4 -44.351 -5.833 136.199 1 35.49 ? C27 PTY 705 A 1 HETATM 27 C C28 PTY . . . F 4 -44.443 -6.319 134.754 1 36.11 ? C28 PTY 705 A 1 HETATM 28 C C29 PTY . . . F 4 -43.048 -6.457 134.152 1 32.35 ? C29 PTY 705 A 1 HETATM 29 C C30 PTY . . . F 4 -48.54 -7.434 150.007 1 43.13 ? C30 PTY 705 A 1 HETATM 30 C C31 PTY . . . F 4 -48.933 -7.154 148.554 1 37.82 ? C31 PTY 705 A 1 HETATM 31 O O30 PTY . . . F 4 -47.604 -6.878 150.479 1 52.98 ? O30 PTY 705 A 1 HETATM 32 C C32 PTY . . . F 4 -49.038 -8.412 147.692 1 39.17 ? C32 PTY 705 A 1 HETATM 33 C C33 PTY . . . F 4 -49.226 -7.986 146.234 1 39.57 ? C33 PTY 705 A 1 HETATM 34 C C34 PTY . . . F 4 -48.302 -8.79 145.319 1 44.74 ? C34 PTY 705 A 1 HETATM 35 C C35 PTY . . . F 4 -47.923 -7.92 144.122 1 47.51 ? C35 PTY 705 A 1 HETATM 36 C C36 PTY . . . F 4 -49.17 -7.663 143.272 1 48.65 ? C36 PTY 705 A 1 HETATM 37 C C37 PTY . . . F 4 -48.79 -7.51 141.794 1 46.6 ? C37 PTY 705 A 1 HETATM 38 C C38 PTY . . . F 4 -50.029 -7.266 140.926 1 38.49 ? C38 PTY 705 A 1 HETATM 39 C C39 PTY . . . F 4 -49.658 -7.025 139.462 1 31.77 ? C39 PTY 705 A 1 HETATM 40 C C40 PTY . . . F 4 -50.708 -7.659 138.551 1 40.23 ? C40 PTY 705 A 1 HETATM 41 C C41 PTY . . . F 4 -50.27 -7.581 137.089 1 55.89 ? C41 PTY 705 A 1 HETATM 42 C C42 PTY . . . F 4 -49.456 -8.827 136.75 1 56.74 ? C42 PTY 705 A 1 HETATM 43 C C43 PTY . . . F 4 -50.198 -9.626 135.681 1 42.64 ? C43 PTY 705 A 1 HETATM 44 C C44 PTY . . . F 4 -49.17 -10.451 134.912 1 26.96 ? C44 PTY 705 A 1 HETATM 45 P P1 PTY . . . F 4 -48.688 -10.289 156.256 1 50.24 ? P1 PTY 705 A 1 HETATM 46 O O11 PTY . . . F 4 -47.561 -9.469 157.14 1 59.32 ? O11 PTY 705 A 1 HETATM 47 O O12 PTY . . . F 4 -50.025 -10.146 156.944 1 41.33 ? O12 PTY 705 A 1 HETATM 48 O O13 PTY . . . F 4 -48.332 -11.757 156.254 1 54.25 ? O13 PTY 705 A 1 HETATM 49 O O14 PTY . . . F 4 -48.766 -9.707 154.702 1 51.79 ? O14 PTY 705 A 1 HETATM 50 N N1 PTY . . . F 4 -46.292 -9.122 160.552 1 41.75 ? N1 PTY 705 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 50 #