data_6ZNC # _model_server_result.job_id QyiDLvgjbOLXneHUiP1hzw _model_server_result.datetime_utc '2024-11-15 03:25:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6znc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6ZNC # _exptl.entry_id 6ZNC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.792 _cell.angle_gamma 90 _cell.entry_id 6ZNC _cell.length_a 137.744 _cell.length_b 49.537 _cell.length_c 34.066 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZNC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_758 -x+2,y,-z+3 -1 0 0 0 1 0 0 0 -1 270.509904 0 102.076686 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 31 A CYS 124 1_555 D C1 QNN . A QNN 302 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.815 ? covale ? covale2 A SG CYS 136 A CYS 229 1_555 E C1 QNN . A QNN 303 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.803 ? covale ? covale3 A SG CYS 136 A CYS 229 1_555 F C1 QN8 . A QN8 304 1_555 ? C ? ? C ? ? ? ? ? ? ? 1.796 ? covale ? covale4 A SG CYS 184 A CYS 277 1_555 G C1 QNN . A QNN 305 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.737 ? metalc ? metalc1 A SG CYS 83 A CYS 176 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc2 A ND1 HIS 86 A HIS 179 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc3 A SG CYS 145 A CYS 238 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc4 A SG CYS 149 A CYS 242 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? hydrog WATSON-CRICK hydrog1 B N1 DG 3 B DG 3 1_555 B N3 DC 10 B DC 10 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 3 B DG 3 1_555 B O2 DC 10 B DC 10 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 3 B DG 3 1_555 B N4 DC 10 B DC 10 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 DG 4 B DG 4 1_555 B N3 DC 9 B DC 9 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N2 DG 4 B DG 4 1_555 B O2 DC 9 B DC 9 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O6 DG 4 B DG 4 1_555 B N4 DC 9 B DC 9 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N3 DC 5 B DC 5 1_555 B N1 DG 8 B DG 8 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N4 DC 5 B DC 5 1_555 B O6 DG 8 B DG 8 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B O2 DC 5 B DC 5 1_555 B N2 DG 8 B DG 8 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog10 B N6 DA 6 B DA 6 1_555 B O4 DT 7 B DT 7 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog11 B N7 DA 6 B DA 6 1_555 B N3 DT 7 B DT 7 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog12 B N3 DT 7 B DT 7 1_555 B N7 DA 6 B DA 6 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog HOOGSTEEN hydrog13 B O4 DT 7 B DT 7 1_555 B N6 DA 6 B DA 6 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B N1 DG 8 B DG 8 1_555 B N3 DC 5 B DC 5 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N2 DG 8 B DG 8 1_555 B O2 DC 5 B DC 5 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B O6 DG 8 B DG 8 1_555 B N4 DC 5 B DC 5 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N3 DC 9 B DC 9 1_555 B N1 DG 4 B DG 4 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N4 DC 9 B DC 9 1_555 B O6 DG 4 B DG 4 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B O2 DC 9 B DC 9 1_555 B N2 DG 4 B DG 4 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N3 DC 10 B DC 10 1_555 B N1 DG 3 B DG 3 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N4 DC 10 B DC 10 1_555 B O6 DG 3 B DG 3 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B O2 DC 10 B DC 10 1_555 B N2 DG 3 B DG 3 2_758 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ZNC _atom_sites.fract_transf_matrix[1][1] 0.00726 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000354 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 301 301 ZN ZN . D 4 QNN A 1 302 401 QNN MQL . E 4 QNN A 1 303 402 QNN MQL . F 5 QN8 A 1 304 403 QN8 MQK . G 4 QNN A 1 305 404 QNN MQL . H 6 HOH A 1 401 52 HOH HOH . H 6 HOH A 2 402 143 HOH HOH . H 6 HOH A 3 403 113 HOH HOH . H 6 HOH A 4 404 58 HOH HOH . H 6 HOH A 5 405 72 HOH HOH . H 6 HOH A 6 406 131 HOH HOH . H 6 HOH A 7 407 141 HOH HOH . H 6 HOH A 8 408 33 HOH HOH . H 6 HOH A 9 409 60 HOH HOH . H 6 HOH A 10 410 142 HOH HOH . H 6 HOH A 11 411 31 HOH HOH . H 6 HOH A 12 412 108 HOH HOH . H 6 HOH A 13 413 14 HOH HOH . H 6 HOH A 14 414 118 HOH HOH . H 6 HOH A 15 415 915 HOH HOH . H 6 HOH A 16 416 3 HOH HOH . H 6 HOH A 17 417 109 HOH HOH . H 6 HOH A 18 418 127 HOH HOH . H 6 HOH A 19 419 101 HOH HOH . H 6 HOH A 20 420 40 HOH HOH . H 6 HOH A 21 421 11 HOH HOH . H 6 HOH A 22 422 49 HOH HOH . H 6 HOH A 23 423 34 HOH HOH . H 6 HOH A 24 424 82 HOH HOH . H 6 HOH A 25 425 157 HOH HOH . H 6 HOH A 26 426 21 HOH HOH . H 6 HOH A 27 427 87 HOH HOH . H 6 HOH A 28 428 8 HOH HOH . H 6 HOH A 29 429 138 HOH HOH . H 6 HOH A 30 430 110 HOH HOH . H 6 HOH A 31 431 53 HOH HOH . H 6 HOH A 32 432 103 HOH HOH . H 6 HOH A 33 433 106 HOH HOH . H 6 HOH A 34 434 13 HOH HOH . H 6 HOH A 35 435 147 HOH HOH . H 6 HOH A 36 436 914 HOH HOH . H 6 HOH A 37 437 25 HOH HOH . H 6 HOH A 38 438 12 HOH HOH . H 6 HOH A 39 439 114 HOH HOH . H 6 HOH A 40 440 38 HOH HOH . H 6 HOH A 41 441 123 HOH HOH . H 6 HOH A 42 442 130 HOH HOH . H 6 HOH A 43 443 88 HOH HOH . H 6 HOH A 44 444 20 HOH HOH . H 6 HOH A 45 445 9 HOH HOH . H 6 HOH A 46 446 7 HOH HOH . H 6 HOH A 47 447 56 HOH HOH . H 6 HOH A 48 448 918 HOH HOH . H 6 HOH A 49 449 63 HOH HOH . H 6 HOH A 50 450 137 HOH HOH . H 6 HOH A 51 451 26 HOH HOH . H 6 HOH A 52 452 71 HOH HOH . H 6 HOH A 53 453 156 HOH HOH . H 6 HOH A 54 454 903 HOH HOH . H 6 HOH A 55 455 902 HOH HOH . H 6 HOH A 56 456 122 HOH HOH . H 6 HOH A 57 457 80 HOH HOH . H 6 HOH A 58 458 16 HOH HOH . H 6 HOH A 59 459 17 HOH HOH . H 6 HOH A 60 460 67 HOH HOH . H 6 HOH A 61 461 119 HOH HOH . H 6 HOH A 62 462 44 HOH HOH . H 6 HOH A 63 463 29 HOH HOH . H 6 HOH A 64 464 6 HOH HOH . H 6 HOH A 65 465 66 HOH HOH . H 6 HOH A 66 466 100 HOH HOH . H 6 HOH A 67 467 1 HOH HOH . H 6 HOH A 68 468 79 HOH HOH . H 6 HOH A 69 469 158 HOH HOH . H 6 HOH A 70 470 97 HOH HOH . H 6 HOH A 71 471 98 HOH HOH . H 6 HOH A 72 472 99 HOH HOH . H 6 HOH A 73 473 32 HOH HOH . H 6 HOH A 74 474 74 HOH HOH . H 6 HOH A 75 475 124 HOH HOH . H 6 HOH A 76 476 117 HOH HOH . H 6 HOH A 77 477 47 HOH HOH . H 6 HOH A 78 478 126 HOH HOH . H 6 HOH A 79 479 136 HOH HOH . H 6 HOH A 80 480 920 HOH HOH . H 6 HOH A 81 481 95 HOH HOH . H 6 HOH A 82 482 128 HOH HOH . H 6 HOH A 83 483 4 HOH HOH . H 6 HOH A 84 484 69 HOH HOH . H 6 HOH A 85 485 134 HOH HOH . H 6 HOH A 86 486 5 HOH HOH . H 6 HOH A 87 487 125 HOH HOH . H 6 HOH A 88 488 59 HOH HOH . H 6 HOH A 89 489 155 HOH HOH . H 6 HOH A 90 490 22 HOH HOH . H 6 HOH A 91 491 54 HOH HOH . H 6 HOH A 92 492 152 HOH HOH . H 6 HOH A 93 493 30 HOH HOH . H 6 HOH A 94 494 39 HOH HOH . H 6 HOH A 95 495 154 HOH HOH . H 6 HOH A 96 496 27 HOH HOH . H 6 HOH A 97 497 70 HOH HOH . H 6 HOH A 98 498 24 HOH HOH . H 6 HOH A 99 499 10 HOH HOH . H 6 HOH A 100 500 112 HOH HOH . H 6 HOH A 101 501 51 HOH HOH . H 6 HOH A 102 502 92 HOH HOH . H 6 HOH A 103 503 140 HOH HOH . H 6 HOH A 104 504 111 HOH HOH . H 6 HOH A 105 505 78 HOH HOH . H 6 HOH A 106 506 43 HOH HOH . H 6 HOH A 107 507 62 HOH HOH . H 6 HOH A 108 508 35 HOH HOH . H 6 HOH A 109 509 28 HOH HOH . H 6 HOH A 110 510 45 HOH HOH . H 6 HOH A 111 511 107 HOH HOH . H 6 HOH A 112 512 84 HOH HOH . H 6 HOH A 113 513 921 HOH HOH . H 6 HOH A 114 514 139 HOH HOH . H 6 HOH A 115 515 75 HOH HOH . H 6 HOH A 116 516 23 HOH HOH . H 6 HOH A 117 517 65 HOH HOH . H 6 HOH A 118 518 919 HOH HOH . H 6 HOH A 119 519 76 HOH HOH . H 6 HOH A 120 520 89 HOH HOH . H 6 HOH A 121 521 145 HOH HOH . H 6 HOH A 122 522 135 HOH HOH . H 6 HOH A 123 523 57 HOH HOH . H 6 HOH A 124 524 116 HOH HOH . H 6 HOH A 125 525 910 HOH HOH . H 6 HOH A 126 526 36 HOH HOH . H 6 HOH A 127 527 115 HOH HOH . H 6 HOH A 128 528 2 HOH HOH . H 6 HOH A 129 529 85 HOH HOH . H 6 HOH A 130 530 104 HOH HOH . H 6 HOH A 131 531 68 HOH HOH . H 6 HOH A 132 532 144 HOH HOH . H 6 HOH A 133 533 146 HOH HOH . H 6 HOH A 134 534 91 HOH HOH . H 6 HOH A 135 535 120 HOH HOH . H 6 HOH A 136 536 901 HOH HOH . H 6 HOH A 137 537 151 HOH HOH . H 6 HOH A 138 538 917 HOH HOH . H 6 HOH A 139 539 86 HOH HOH . H 6 HOH A 140 540 911 HOH HOH . H 6 HOH A 141 541 48 HOH HOH . H 6 HOH A 142 542 73 HOH HOH . H 6 HOH A 143 543 913 HOH HOH . H 6 HOH A 144 544 916 HOH HOH . H 6 HOH A 145 545 904 HOH HOH . H 6 HOH A 146 546 93 HOH HOH . H 6 HOH A 147 547 912 HOH HOH . H 6 HOH A 148 548 150 HOH HOH . H 6 HOH A 149 549 909 HOH HOH . H 6 HOH A 150 550 153 HOH HOH . H 6 HOH A 151 551 149 HOH HOH . H 6 HOH A 152 552 41 HOH HOH . H 6 HOH A 153 553 19 HOH HOH . I 6 HOH B 1 101 105 HOH HOH . I 6 HOH B 2 102 50 HOH HOH . I 6 HOH B 3 103 907 HOH HOH . I 6 HOH B 4 104 42 HOH HOH . I 6 HOH B 5 105 129 HOH HOH . I 6 HOH B 6 106 37 HOH HOH . I 6 HOH B 7 107 15 HOH HOH . I 6 HOH B 8 108 102 HOH HOH . I 6 HOH B 9 109 905 HOH HOH . I 6 HOH B 10 110 83 HOH HOH . I 6 HOH B 11 111 55 HOH HOH . I 6 HOH B 12 112 61 HOH HOH . I 6 HOH B 13 113 64 HOH HOH . I 6 HOH B 14 114 148 HOH HOH . I 6 HOH B 15 115 96 HOH HOH . I 6 HOH B 16 116 90 HOH HOH . I 6 HOH B 17 117 77 HOH HOH . I 6 HOH B 18 118 18 HOH HOH . I 6 HOH B 19 119 133 HOH HOH . I 6 HOH B 20 120 94 HOH HOH . I 6 HOH B 21 121 81 HOH HOH . I 6 HOH B 22 122 908 HOH HOH . I 6 HOH B 23 123 46 HOH HOH . I 6 HOH B 24 124 906 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 141.001 _atom_site.Cartn_y -14.708 _atom_site.Cartn_z 48.102 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #