data_6ZOB # _model_server_result.job_id l0qYgOZPwI0Btg7xNjeUNA _model_server_result.datetime_utc '2024-11-27 17:58:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1206}' # _entry.id 6ZOB # _exptl.entry_id 6ZOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOB _cell.length_a 145.361 _cell.length_b 160.195 _cell.length_c 244.341 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 H N N ? 3 K N N ? 3 O N N ? 3 T N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 512 n n C1B O1B LMT sing 513 n n C1B O5B LMT sing 514 n n C1B H1B LMT sing 515 n n C2B C3B LMT sing 516 n n C2B O2B LMT sing 517 n n C2B H2B LMT sing 518 n n C3B C4B LMT sing 519 n n C3B O3B LMT sing 520 n n C3B H3B LMT sing 521 n n C4B C5B LMT sing 522 n n C4B O4' LMT sing 523 n n C4B H4B LMT sing 524 n n C5B C6B LMT sing 525 n n C5B O5B LMT sing 526 n n C5B H5B LMT sing 527 n n C6B O6B LMT sing 528 n n C6B "H6'2" LMT sing 529 n n C6B "H6'1" LMT sing 530 n n O1B C4' LMT sing 531 n n O2B H2O1 LMT sing 532 n n O3B H3O1 LMT sing 533 n n O4' H4O1 LMT sing 534 n n O6B H6B LMT sing 535 n n C1' C2' LMT sing 536 n n C1' O1' LMT sing 537 n n C1' O5' LMT sing 538 n n C1' H1' LMT sing 539 n n C2' C3' LMT sing 540 n n C2' O2' LMT sing 541 n n C2' H2' LMT sing 542 n n C3' C4' LMT sing 543 n n C3' O3' LMT sing 544 n n C3' H3' LMT sing 545 n n C4' C5' LMT sing 546 n n C4' H4' LMT sing 547 n n C5' C6' LMT sing 548 n n C5' O5' LMT sing 549 n n C5' H5' LMT sing 550 n n C6' O6' LMT sing 551 n n C6' H6D LMT sing 552 n n C6' H6E LMT sing 553 n n O1' C1 LMT sing 554 n n O2' H2O2 LMT sing 555 n n O3' H3O2 LMT sing 556 n n O6' H6' LMT sing 557 n n C1 C2 LMT sing 558 n n C1 H12 LMT sing 559 n n C1 H11 LMT sing 560 n n C2 C3 LMT sing 561 n n C2 H22 LMT sing 562 n n C2 H21 LMT sing 563 n n C3 C4 LMT sing 564 n n C3 H32 LMT sing 565 n n C3 H31 LMT sing 566 n n C4 C5 LMT sing 567 n n C4 H42 LMT sing 568 n n C4 H41 LMT sing 569 n n C5 C6 LMT sing 570 n n C5 H52 LMT sing 571 n n C5 H51 LMT sing 572 n n C6 C7 LMT sing 573 n n C6 H62 LMT sing 574 n n C6 H61 LMT sing 575 n n C7 C8 LMT sing 576 n n C7 H72 LMT sing 577 n n C7 H71 LMT sing 578 n n C8 C9 LMT sing 579 n n C8 H82 LMT sing 580 n n C8 H81 LMT sing 581 n n C9 C10 LMT sing 582 n n C9 H92 LMT sing 583 n n C9 H91 LMT sing 584 n n C10 C11 LMT sing 585 n n C10 H102 LMT sing 586 n n C10 H101 LMT sing 587 n n C11 C12 LMT sing 588 n n C11 H112 LMT sing 589 n n C11 H111 LMT sing 590 n n C12 H123 LMT sing 591 n n C12 H122 LMT sing 592 n n C12 H121 LMT sing 593 n n # _atom_sites.entry_id 6ZOB _atom_sites.fract_transf_matrix[1][1] 0.006879 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004093 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 LMT A 1 1201 1201 LMT LMT . G 3 LMT A 1 1202 1301 LMT LMT . H 3 LMT A 1 1203 1401 LMT LMT . I 4 HEX A 1 1204 1501 HEX HEX . J 5 GOL A 1 1205 1601 GOL GOL . K 3 LMT A 1 1206 1701 LMT LMT . L 6 ETE A 1 1207 1801 ETE ETE . M 7 3YI A 1 1208 1901 3YI 3YI . N 8 EDO A 1 1209 201 EDO EDO . O 3 LMT B 1 1101 1101 LMT LMT . P 9 DDR B 1 1102 1201 DDR DDR . Q 10 DDQ B 1 1103 1301 DDQ DDQ . R 11 OCT B 1 1104 1401 OCT OCT . S 5 GOL B 1 1105 1501 GOL GOL . T 3 LMT C 1 1101 1101 LMT LMT . U 12 D10 C 1 1102 1201 D10 D10 . V 5 GOL C 1 1103 1401 GOL GOL . W 13 CL C 1 1104 1501 CL CL . X 5 GOL D 1 201 201 GOL GOL . Y 14 HOH A 1 1301 13 HOH HOH . Y 14 HOH A 2 1302 27 HOH HOH . Y 14 HOH A 3 1303 138 HOH HOH . Y 14 HOH A 4 1304 55 HOH HOH . Y 14 HOH A 5 1305 140 HOH HOH . Y 14 HOH A 6 1306 62 HOH HOH . Y 14 HOH A 7 1307 65 HOH HOH . Y 14 HOH A 8 1308 21 HOH HOH . Y 14 HOH A 9 1309 64 HOH HOH . Y 14 HOH A 10 1310 4 HOH HOH . Y 14 HOH A 11 1311 20 HOH HOH . Y 14 HOH A 12 1312 135 HOH HOH . Y 14 HOH A 13 1313 61 HOH HOH . Y 14 HOH A 14 1314 6 HOH HOH . Y 14 HOH A 15 1315 60 HOH HOH . Y 14 HOH A 16 1316 72 HOH HOH . Y 14 HOH A 17 1317 79 HOH HOH . Y 14 HOH A 18 1318 71 HOH HOH . Y 14 HOH A 19 1319 59 HOH HOH . Y 14 HOH A 20 1320 154 HOH HOH . Y 14 HOH A 21 1321 14 HOH HOH . Y 14 HOH A 22 1322 151 HOH HOH . Y 14 HOH A 23 1323 104 HOH HOH . Y 14 HOH A 24 1324 105 HOH HOH . Y 14 HOH A 25 1325 152 HOH HOH . Y 14 HOH A 26 1326 22 HOH HOH . Y 14 HOH A 27 1327 106 HOH HOH . Y 14 HOH A 28 1328 58 HOH HOH . Y 14 HOH A 29 1329 120 HOH HOH . Y 14 HOH A 30 1330 76 HOH HOH . Y 14 HOH A 31 1331 74 HOH HOH . Y 14 HOH A 32 1332 41 HOH HOH . Y 14 HOH A 33 1333 144 HOH HOH . Y 14 HOH A 34 1334 137 HOH HOH . Y 14 HOH A 35 1335 69 HOH HOH . Y 14 HOH A 36 1336 66 HOH HOH . Y 14 HOH A 37 1337 149 HOH HOH . Y 14 HOH A 38 1338 81 HOH HOH . Y 14 HOH A 39 1339 73 HOH HOH . Y 14 HOH A 40 1340 56 HOH HOH . Y 14 HOH A 41 1341 139 HOH HOH . Y 14 HOH A 42 1342 44 HOH HOH . Y 14 HOH A 43 1343 148 HOH HOH . Y 14 HOH A 44 1344 49 HOH HOH . Y 14 HOH A 45 1345 57 HOH HOH . Y 14 HOH A 46 1346 87 HOH HOH . Y 14 HOH A 47 1347 50 HOH HOH . Y 14 HOH A 48 1348 141 HOH HOH . Y 14 HOH A 49 1349 43 HOH HOH . Y 14 HOH A 50 1350 40 HOH HOH . Y 14 HOH A 51 1351 42 HOH HOH . Y 14 HOH A 52 1352 80 HOH HOH . Y 14 HOH A 53 1353 8 HOH HOH . Y 14 HOH A 54 1354 78 HOH HOH . Y 14 HOH A 55 1355 119 HOH HOH . Y 14 HOH A 56 1356 123 HOH HOH . Y 14 HOH A 57 1357 51 HOH HOH . Y 14 HOH A 58 1358 47 HOH HOH . Y 14 HOH A 59 1359 75 HOH HOH . Y 14 HOH A 60 1360 134 HOH HOH . Y 14 HOH A 61 1361 48 HOH HOH . Y 14 HOH A 62 1362 19 HOH HOH . Z 14 HOH B 1 1201 82 HOH HOH . Z 14 HOH B 2 1202 88 HOH HOH . Z 14 HOH B 3 1203 26 HOH HOH . Z 14 HOH B 4 1204 150 HOH HOH . Z 14 HOH B 5 1205 63 HOH HOH . Z 14 HOH B 6 1206 83 HOH HOH . Z 14 HOH B 7 1207 86 HOH HOH . Z 14 HOH B 8 1208 34 HOH HOH . Z 14 HOH B 9 1209 143 HOH HOH . Z 14 HOH B 10 1210 23 HOH HOH . Z 14 HOH B 11 1211 90 HOH HOH . Z 14 HOH B 12 1212 67 HOH HOH . Z 14 HOH B 13 1213 124 HOH HOH . Z 14 HOH B 14 1214 70 HOH HOH . Z 14 HOH B 15 1215 68 HOH HOH . Z 14 HOH B 16 1216 108 HOH HOH . Z 14 HOH B 17 1217 46 HOH HOH . Z 14 HOH B 18 1218 153 HOH HOH . Z 14 HOH B 19 1219 45 HOH HOH . Z 14 HOH B 20 1220 38 HOH HOH . Z 14 HOH B 21 1221 25 HOH HOH . Z 14 HOH B 22 1222 24 HOH HOH . Z 14 HOH B 23 1223 84 HOH HOH . Z 14 HOH B 24 1224 136 HOH HOH . Z 14 HOH B 25 1225 85 HOH HOH . Z 14 HOH B 26 1226 91 HOH HOH . Z 14 HOH B 27 1227 125 HOH HOH . Z 14 HOH B 28 1228 89 HOH HOH . Z 14 HOH B 29 1229 18 HOH HOH . Z 14 HOH B 30 1230 133 HOH HOH . AA 14 HOH C 1 1201 31 HOH HOH . AA 14 HOH C 2 1202 7 HOH HOH . AA 14 HOH C 3 1203 114 HOH HOH . AA 14 HOH C 4 1204 113 HOH HOH . AA 14 HOH C 5 1205 37 HOH HOH . AA 14 HOH C 6 1206 1 HOH HOH . AA 14 HOH C 7 1207 98 HOH HOH . AA 14 HOH C 8 1208 36 HOH HOH . AA 14 HOH C 9 1209 3 HOH HOH . AA 14 HOH C 10 1210 109 HOH HOH . AA 14 HOH C 11 1211 129 HOH HOH . AA 14 HOH C 12 1212 103 HOH HOH . AA 14 HOH C 13 1213 15 HOH HOH . AA 14 HOH C 14 1214 12 HOH HOH . AA 14 HOH C 15 1215 99 HOH HOH . AA 14 HOH C 16 1216 10 HOH HOH . AA 14 HOH C 17 1217 102 HOH HOH . AA 14 HOH C 18 1218 9 HOH HOH . AA 14 HOH C 19 1219 96 HOH HOH . AA 14 HOH C 20 1220 107 HOH HOH . AA 14 HOH C 21 1221 53 HOH HOH . AA 14 HOH C 22 1222 16 HOH HOH . AA 14 HOH C 23 1223 95 HOH HOH . AA 14 HOH C 24 1224 115 HOH HOH . AA 14 HOH C 25 1225 29 HOH HOH . AA 14 HOH C 26 1226 11 HOH HOH . AA 14 HOH C 27 1227 93 HOH HOH . AA 14 HOH C 28 1228 92 HOH HOH . AA 14 HOH C 29 1229 28 HOH HOH . AA 14 HOH C 30 1230 128 HOH HOH . AA 14 HOH C 31 1231 145 HOH HOH . AA 14 HOH C 32 1232 110 HOH HOH . AA 14 HOH C 33 1233 35 HOH HOH . AA 14 HOH C 34 1234 52 HOH HOH . AA 14 HOH C 35 1235 17 HOH HOH . AA 14 HOH C 36 1236 30 HOH HOH . AA 14 HOH C 37 1237 77 HOH HOH . AA 14 HOH C 38 1238 130 HOH HOH . AA 14 HOH C 39 1239 97 HOH HOH . AA 14 HOH C 40 1240 116 HOH HOH . AA 14 HOH C 41 1241 112 HOH HOH . AA 14 HOH C 42 1242 126 HOH HOH . AA 14 HOH C 43 1243 100 HOH HOH . AA 14 HOH C 44 1244 94 HOH HOH . AA 14 HOH C 45 1245 5 HOH HOH . AA 14 HOH C 46 1246 33 HOH HOH . AA 14 HOH C 47 1247 32 HOH HOH . AA 14 HOH C 48 1248 111 HOH HOH . AA 14 HOH C 49 1249 127 HOH HOH . AA 14 HOH C 50 1250 117 HOH HOH . AA 14 HOH C 51 1251 118 HOH HOH . BA 14 HOH D 1 301 142 HOH HOH . BA 14 HOH D 2 302 121 HOH HOH . CA 14 HOH E 1 201 2 HOH HOH . CA 14 HOH E 2 202 147 HOH HOH . CA 14 HOH E 3 203 122 HOH HOH . CA 14 HOH E 4 204 101 HOH HOH . CA 14 HOH E 5 205 39 HOH HOH . CA 14 HOH E 6 206 132 HOH HOH . CA 14 HOH E 7 207 146 HOH HOH . CA 14 HOH E 8 208 131 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . K 3 1.737 31.061 -32.603 1 79.55 ? C1B LMT 1206 A 1 HETATM 2 C C2B LMT . . . K 3 2.375 31.947 -31.524 1 79.38 ? C2B LMT 1206 A 1 HETATM 3 C C3B LMT . . . K 3 2.063 33.425 -31.77 1 79.28 ? C3B LMT 1206 A 1 HETATM 4 C C4B LMT . . . K 3 1.657 33.7 -33.217 1 79.42 ? C4B LMT 1206 A 1 HETATM 5 C C5B LMT . . . K 3 0.488 32.819 -33.668 1 79.31 ? C5B LMT 1206 A 1 HETATM 6 C C6B LMT . . . K 3 0.565 32.526 -35.167 1 78.9 ? C6B LMT 1206 A 1 HETATM 7 O O1B LMT . . . K 3 1.702 29.668 -32.237 1 79.42 ? O1B LMT 1206 A 1 HETATM 8 O O2B LMT . . . K 3 1.926 31.601 -30.207 1 78.95 ? O2B LMT 1206 A 1 HETATM 9 O O3B LMT . . . K 3 3.214 34.215 -31.443 1 79.1 ? O3B LMT 1206 A 1 HETATM 10 O O4' LMT . . . K 3 1.291 35.079 -33.352 1 79.76 ? O4' LMT 1206 A 1 HETATM 11 O O5B LMT . . . K 3 0.446 31.591 -32.926 1 79.69 ? O5B LMT 1206 A 1 HETATM 12 O O6B LMT . . . K 3 -0.496 31.646 -35.555 1 78.59 ? O6B LMT 1206 A 1 HETATM 13 C C1' LMT . . . K 3 -0.89 26.784 -30.73 1 78.11 ? C1' LMT 1206 A 1 HETATM 14 C C2' LMT . . . K 3 -1.573 27.926 -31.476 1 78.52 ? C2' LMT 1206 A 1 HETATM 15 C C3' LMT . . . K 3 -0.569 28.766 -32.261 1 78.78 ? C3' LMT 1206 A 1 HETATM 16 C C4' LMT . . . K 3 0.643 29.161 -31.414 1 78.87 ? C4' LMT 1206 A 1 HETATM 17 C C5' LMT . . . K 3 1.187 27.943 -30.657 1 78.65 ? C5' LMT 1206 A 1 HETATM 18 C C6' LMT . . . K 3 2.329 28.282 -29.697 1 78.48 ? C6' LMT 1206 A 1 HETATM 19 O O1' LMT . . . K 3 -1.853 26.102 -29.92 1 76.59 ? O1' LMT 1206 A 1 HETATM 20 O O2' LMT . . . K 3 -2.552 27.397 -32.379 1 78.66 ? O2' LMT 1206 A 1 HETATM 21 O O3' LMT . . . K 3 -1.25 29.93 -32.744 1 78.85 ? O3' LMT 1206 A 1 HETATM 22 O O5' LMT . . . K 3 0.143 27.32 -29.903 1 78.53 ? O5' LMT 1206 A 1 HETATM 23 O O6' LMT . . . K 3 3.287 29.161 -30.3 1 78.42 ? O6' LMT 1206 A 1 HETATM 24 C C1 LMT . . . K 3 -1.877 24.682 -30.091 1 74.67 ? C1 LMT 1206 A 1 HETATM 25 C C2 LMT . . . K 3 -2.563 24.322 -31.408 1 73.46 ? C2 LMT 1206 A 1 HETATM 26 C C3 LMT . . . K 3 -3.112 22.895 -31.408 1 72.35 ? C3 LMT 1206 A 1 HETATM 27 C C4 LMT . . . K 3 -4.606 22.832 -31.734 1 71.46 ? C4 LMT 1206 A 1 HETATM 28 C C5 LMT . . . K 3 -4.879 22.231 -33.113 1 70.73 ? C5 LMT 1206 A 1 HETATM 29 C C6 LMT . . . K 3 -4.604 23.214 -34.251 1 69.87 ? C6 LMT 1206 A 1 HETATM 30 C C7 LMT . . . K 3 -3.417 22.786 -35.111 1 69.1 ? C7 LMT 1206 A 1 HETATM 31 C C8 LMT . . . K 3 -3.79 21.665 -36.077 1 68.46 ? C8 LMT 1206 A 1 HETATM 32 C C9 LMT . . . K 3 -2.605 21.281 -36.962 1 67.86 ? C9 LMT 1206 A 1 HETATM 33 C C10 LMT . . . K 3 -2.486 19.769 -37.137 1 67.31 ? C10 LMT 1206 A 1 HETATM 34 C C11 LMT . . . K 3 -3.677 19.192 -37.897 1 66.84 ? C11 LMT 1206 A 1 HETATM 35 C C12 LMT . . . K 3 -3.279 17.967 -38.693 1 66.47 ? C12 LMT 1206 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 46 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #