data_6ZOE # _model_server_result.job_id 86UKrwCEDQ4olA00pPp_JA _model_server_result.datetime_utc '2024-11-05 10:47:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zoe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 6ZOE # _exptl.entry_id 6ZOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 142.282 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DECANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOE _cell.length_a 226.609 _cell.length_b 226.609 _cell.length_c 226.609 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H22' _chem_comp.formula_weight 142.282 _chem_comp.id D10 _chem_comp.mon_nstd_flag . _chem_comp.name DECANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 D10 sing 83 n n C1 H11 D10 sing 84 n n C1 H12 D10 sing 85 n n C1 H13 D10 sing 86 n n C2 C3 D10 sing 87 n n C2 H21 D10 sing 88 n n C2 H22 D10 sing 89 n n C3 C4 D10 sing 90 n n C3 H31 D10 sing 91 n n C3 H32 D10 sing 92 n n C4 C5 D10 sing 93 n n C4 H41 D10 sing 94 n n C4 H42 D10 sing 95 n n C5 C6 D10 sing 96 n n C5 H51 D10 sing 97 n n C5 H52 D10 sing 98 n n C6 C7 D10 sing 99 n n C6 H61 D10 sing 100 n n C6 H62 D10 sing 101 n n C7 C8 D10 sing 102 n n C7 H71 D10 sing 103 n n C7 H72 D10 sing 104 n n C8 C9 D10 sing 105 n n C8 H81 D10 sing 106 n n C8 H82 D10 sing 107 n n C9 C10 D10 sing 108 n n C9 H91 D10 sing 109 n n C9 H92 D10 sing 110 n n C10 H101 D10 sing 111 n n C10 H102 D10 sing 112 n n C10 H103 D10 sing 113 n n # _atom_sites.entry_id 6ZOE _atom_sites.fract_transf_matrix[1][1] 0.004413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 D10 A 1 1101 1101 D10 D10 . D 4 EDO A 1 1102 1201 EDO EDO . E 5 LMT A 1 1103 1301 LMT LMT . F 6 PGE A 1 1104 1401 PGE PGE . G 6 PGE A 1 1105 201 PGE PGE . H 4 EDO B 1 301 301 EDO EDO . I 7 HOH A 1 1201 42 HOH HOH . I 7 HOH A 2 1202 8 HOH HOH . I 7 HOH A 3 1203 45 HOH HOH . I 7 HOH A 4 1204 36 HOH HOH . I 7 HOH A 5 1205 9 HOH HOH . I 7 HOH A 6 1206 4 HOH HOH . I 7 HOH A 7 1207 40 HOH HOH . I 7 HOH A 8 1208 43 HOH HOH . I 7 HOH A 9 1209 31 HOH HOH . I 7 HOH A 10 1210 44 HOH HOH . I 7 HOH A 11 1211 51 HOH HOH . I 7 HOH A 12 1212 16 HOH HOH . I 7 HOH A 13 1213 41 HOH HOH . I 7 HOH A 14 1214 47 HOH HOH . I 7 HOH A 15 1215 32 HOH HOH . I 7 HOH A 16 1216 37 HOH HOH . I 7 HOH A 17 1217 33 HOH HOH . I 7 HOH A 18 1218 39 HOH HOH . I 7 HOH A 19 1219 20 HOH HOH . I 7 HOH A 20 1220 38 HOH HOH . I 7 HOH A 21 1221 34 HOH HOH . I 7 HOH A 22 1222 30 HOH HOH . I 7 HOH A 23 1223 5 HOH HOH . I 7 HOH A 24 1224 10 HOH HOH . I 7 HOH A 25 1225 35 HOH HOH . I 7 HOH A 26 1226 48 HOH HOH . I 7 HOH A 27 1227 28 HOH HOH . I 7 HOH A 28 1228 3 HOH HOH . I 7 HOH A 29 1229 17 HOH HOH . I 7 HOH A 30 1230 21 HOH HOH . I 7 HOH A 31 1231 50 HOH HOH . I 7 HOH A 32 1232 11 HOH HOH . I 7 HOH A 33 1233 25 HOH HOH . I 7 HOH A 34 1234 15 HOH HOH . I 7 HOH A 35 1235 19 HOH HOH . I 7 HOH A 36 1236 12 HOH HOH . I 7 HOH A 37 1237 24 HOH HOH . I 7 HOH A 38 1238 14 HOH HOH . I 7 HOH A 39 1239 26 HOH HOH . I 7 HOH A 40 1240 46 HOH HOH . I 7 HOH A 41 1241 13 HOH HOH . J 7 HOH B 1 401 27 HOH HOH . J 7 HOH B 2 402 54 HOH HOH . J 7 HOH B 3 403 56 HOH HOH . J 7 HOH B 4 404 49 HOH HOH . J 7 HOH B 5 405 18 HOH HOH . J 7 HOH B 6 406 2 HOH HOH . J 7 HOH B 7 407 29 HOH HOH . J 7 HOH B 8 408 1 HOH HOH . J 7 HOH B 9 409 23 HOH HOH . J 7 HOH B 10 410 22 HOH HOH . J 7 HOH B 11 411 52 HOH HOH . J 7 HOH B 12 412 55 HOH HOH . J 7 HOH B 13 413 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 D10 . . . C 3 -48.009 -62.945 -114.768 1 106.05 ? C1 D10 1101 A 1 HETATM 2 C C2 D10 . . . C 3 -47.109 -62.066 -115.603 1 106.86 ? C2 D10 1101 A 1 HETATM 3 C C3 D10 . . . C 3 -47.388 -60.592 -115.447 1 106.54 ? C3 D10 1101 A 1 HETATM 4 C C4 D10 . . . C 3 -46.646 -59.932 -114.312 1 105.13 ? C4 D10 1101 A 1 HETATM 5 C C5 D10 . . . C 3 -46.983 -58.474 -114.117 1 104.91 ? C5 D10 1101 A 1 HETATM 6 C C6 D10 . . . C 3 -48.236 -58.226 -113.309 1 103.87 ? C6 D10 1101 A 1 HETATM 7 C C7 D10 . . . C 3 -48.479 -56.774 -112.969 1 103.33 ? C7 D10 1101 A 1 HETATM 8 C C8 D10 . . . C 3 -47.684 -56.273 -111.789 1 101.95 ? C8 D10 1101 A 1 HETATM 9 C C9 D10 . . . C 3 -47.857 -54.801 -111.51 1 101.71 ? C9 D10 1101 A 1 HETATM 10 C C10 D10 . . . C 3 -47.308 -54.356 -110.173 1 100.4 ? C10 D10 1101 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #