data_6ZOE # _model_server_result.job_id JgOLVy-ZF9doKWFeqREGMg _model_server_result.datetime_utc '2024-11-05 10:31:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zoe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 6ZOE # _exptl.entry_id 6ZOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOE _cell.length_a 226.609 _cell.length_b 226.609 _cell.length_c 226.609 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 114 n n C1 C2 EDO sing 115 n n C1 H11 EDO sing 116 n n C1 H12 EDO sing 117 n n O1 HO1 EDO sing 118 n n C2 O2 EDO sing 119 n n C2 H21 EDO sing 120 n n C2 H22 EDO sing 121 n n O2 HO2 EDO sing 122 n n # _atom_sites.entry_id 6ZOE _atom_sites.fract_transf_matrix[1][1] 0.004413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004413 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004413 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 D10 A 1 1101 1101 D10 D10 . D 4 EDO A 1 1102 1201 EDO EDO . E 5 LMT A 1 1103 1301 LMT LMT . F 6 PGE A 1 1104 1401 PGE PGE . G 6 PGE A 1 1105 201 PGE PGE . H 4 EDO B 1 301 301 EDO EDO . I 7 HOH A 1 1201 42 HOH HOH . I 7 HOH A 2 1202 8 HOH HOH . I 7 HOH A 3 1203 45 HOH HOH . I 7 HOH A 4 1204 36 HOH HOH . I 7 HOH A 5 1205 9 HOH HOH . I 7 HOH A 6 1206 4 HOH HOH . I 7 HOH A 7 1207 40 HOH HOH . I 7 HOH A 8 1208 43 HOH HOH . I 7 HOH A 9 1209 31 HOH HOH . I 7 HOH A 10 1210 44 HOH HOH . I 7 HOH A 11 1211 51 HOH HOH . I 7 HOH A 12 1212 16 HOH HOH . I 7 HOH A 13 1213 41 HOH HOH . I 7 HOH A 14 1214 47 HOH HOH . I 7 HOH A 15 1215 32 HOH HOH . I 7 HOH A 16 1216 37 HOH HOH . I 7 HOH A 17 1217 33 HOH HOH . I 7 HOH A 18 1218 39 HOH HOH . I 7 HOH A 19 1219 20 HOH HOH . I 7 HOH A 20 1220 38 HOH HOH . I 7 HOH A 21 1221 34 HOH HOH . I 7 HOH A 22 1222 30 HOH HOH . I 7 HOH A 23 1223 5 HOH HOH . I 7 HOH A 24 1224 10 HOH HOH . I 7 HOH A 25 1225 35 HOH HOH . I 7 HOH A 26 1226 48 HOH HOH . I 7 HOH A 27 1227 28 HOH HOH . I 7 HOH A 28 1228 3 HOH HOH . I 7 HOH A 29 1229 17 HOH HOH . I 7 HOH A 30 1230 21 HOH HOH . I 7 HOH A 31 1231 50 HOH HOH . I 7 HOH A 32 1232 11 HOH HOH . I 7 HOH A 33 1233 25 HOH HOH . I 7 HOH A 34 1234 15 HOH HOH . I 7 HOH A 35 1235 19 HOH HOH . I 7 HOH A 36 1236 12 HOH HOH . I 7 HOH A 37 1237 24 HOH HOH . I 7 HOH A 38 1238 14 HOH HOH . I 7 HOH A 39 1239 26 HOH HOH . I 7 HOH A 40 1240 46 HOH HOH . I 7 HOH A 41 1241 13 HOH HOH . J 7 HOH B 1 401 27 HOH HOH . J 7 HOH B 2 402 54 HOH HOH . J 7 HOH B 3 403 56 HOH HOH . J 7 HOH B 4 404 49 HOH HOH . J 7 HOH B 5 405 18 HOH HOH . J 7 HOH B 6 406 2 HOH HOH . J 7 HOH B 7 407 29 HOH HOH . J 7 HOH B 8 408 1 HOH HOH . J 7 HOH B 9 409 23 HOH HOH . J 7 HOH B 10 410 22 HOH HOH . J 7 HOH B 11 411 52 HOH HOH . J 7 HOH B 12 412 55 HOH HOH . J 7 HOH B 13 413 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 4 25.34 -14.678 -56.618 1 103.11 ? C1 EDO 301 B 1 HETATM 2 O O1 EDO . . . H 4 24.584 -13.675 -55.972 1 100.1 ? O1 EDO 301 B 1 HETATM 3 C C2 EDO . . . H 4 24.593 -15.947 -56.775 1 101.9 ? C2 EDO 301 B 1 HETATM 4 O O2 EDO . . . H 4 25.128 -16.779 -57.784 1 105.49 ? O2 EDO 301 B 1 # _model_server_stats.io_time_ms 138 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #