data_6ZOF # _model_server_result.job_id -uDc464OdnEtEigAU8LTLw _model_server_result.datetime_utc '2024-11-05 11:03:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":1101}' # _entry.id 6ZOF # _exptl.entry_id 6ZOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 734.039 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOF _cell.length_a 145.1 _cell.length_b 162.327 _cell.length_c 244.852 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 10 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O4 PTY sing 531 n n C1 C6 PTY sing 532 n n C1 HC11 PTY sing 533 n n C1 HC12 PTY sing 534 n n C2 C3 PTY sing 535 n n C2 N1 PTY sing 536 n n C2 HC21 PTY sing 537 n n C2 HC22 PTY sing 538 n n C3 O11 PTY sing 539 n n C3 HC31 PTY sing 540 n n C3 HC32 PTY sing 541 n n O4 C30 PTY sing 542 n n C5 C6 PTY sing 543 n n C5 O14 PTY sing 544 n n C5 HC51 PTY sing 545 n n C5 HC52 PTY sing 546 n n C6 O7 PTY sing 547 n n C6 HC6 PTY sing 548 n n O7 C8 PTY sing 549 n n C8 O10 PTY doub 550 n n C8 C11 PTY sing 551 n n C11 C12 PTY sing 552 n n C11 H111 PTY sing 553 n n C11 H112 PTY sing 554 n n C12 C13 PTY sing 555 n n C12 H121 PTY sing 556 n n C12 H122 PTY sing 557 n n C13 C14 PTY sing 558 n n C13 H131 PTY sing 559 n n C13 H132 PTY sing 560 n n C14 C15 PTY sing 561 n n C14 H141 PTY sing 562 n n C14 H142 PTY sing 563 n n C15 C16 PTY sing 564 n n C15 H151 PTY sing 565 n n C15 H152 PTY sing 566 n n C16 C17 PTY sing 567 n n C16 H161 PTY sing 568 n n C16 H162 PTY sing 569 n n C17 C18 PTY sing 570 n n C17 H171 PTY sing 571 n n C17 H172 PTY sing 572 n n C18 C19 PTY sing 573 n n C18 H181 PTY sing 574 n n C18 H182 PTY sing 575 n n C19 C20 PTY sing 576 n n C19 H191 PTY sing 577 n n C19 H192 PTY sing 578 n n C20 C21 PTY sing 579 n n C20 H201 PTY sing 580 n n C20 H202 PTY sing 581 n n C21 C22 PTY sing 582 n n C21 H211 PTY sing 583 n n C21 H212 PTY sing 584 n n C22 C23 PTY sing 585 n n C22 H221 PTY sing 586 n n C22 H222 PTY sing 587 n n C23 C24 PTY sing 588 n n C23 H231 PTY sing 589 n n C23 H232 PTY sing 590 n n C24 C25 PTY sing 591 n n C24 H241 PTY sing 592 n n C24 H242 PTY sing 593 n n C25 C26 PTY sing 594 n n C25 H251 PTY sing 595 n n C25 H252 PTY sing 596 n n C26 C27 PTY sing 597 n n C26 H261 PTY sing 598 n n C26 H262 PTY sing 599 n n C27 C28 PTY sing 600 n n C27 H271 PTY sing 601 n n C27 H272 PTY sing 602 n n C28 C29 PTY sing 603 n n C28 H281 PTY sing 604 n n C28 H282 PTY sing 605 n n C29 H291 PTY sing 606 n n C29 H292 PTY sing 607 n n C29 H293 PTY sing 608 n n C30 C31 PTY sing 609 n n C30 O30 PTY doub 610 n n C31 C32 PTY sing 611 n n C31 H311 PTY sing 612 n n C31 H312 PTY sing 613 n n C32 C33 PTY sing 614 n n C32 H321 PTY sing 615 n n C32 H322 PTY sing 616 n n C33 C34 PTY sing 617 n n C33 H331 PTY sing 618 n n C33 H332 PTY sing 619 n n C34 C35 PTY sing 620 n n C34 H341 PTY sing 621 n n C34 H342 PTY sing 622 n n C35 C36 PTY sing 623 n n C35 H351 PTY sing 624 n n C35 H352 PTY sing 625 n n C36 C37 PTY sing 626 n n C36 H361 PTY sing 627 n n C36 H362 PTY sing 628 n n C37 C38 PTY sing 629 n n C37 H371 PTY sing 630 n n C37 H372 PTY sing 631 n n C38 C39 PTY sing 632 n n C38 H381 PTY sing 633 n n C38 H382 PTY sing 634 n n C39 C40 PTY sing 635 n n C39 H391 PTY sing 636 n n C39 H392 PTY sing 637 n n C40 C41 PTY sing 638 n n C40 H401 PTY sing 639 n n C40 H402 PTY sing 640 n n C41 C42 PTY sing 641 n n C41 H411 PTY sing 642 n n C41 H412 PTY sing 643 n n C42 C43 PTY sing 644 n n C42 H421 PTY sing 645 n n C42 H422 PTY sing 646 n n C43 C44 PTY sing 647 n n C43 H431 PTY sing 648 n n C43 H432 PTY sing 649 n n C44 H441 PTY sing 650 n n C44 H442 PTY sing 651 n n C44 H443 PTY sing 652 n n P1 O11 PTY sing 653 n n P1 O12 PTY sing 654 n n P1 O13 PTY doub 655 n n P1 O14 PTY sing 656 n n O12 H12O PTY sing 657 n n N1 HN11 PTY sing 658 n n N1 HN12 PTY sing 659 n n # _atom_sites.entry_id 6ZOF _atom_sites.fract_transf_matrix[1][1] 0.006892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 LMT A 1 1101 5 LMT LMT . G 3 LMT A 1 1102 6 LMT LMT . H 4 SO4 A 1 1103 1 SO4 SO4 . I 5 D10 B 1 1101 1101 D10 D10 . J 6 DDQ B 1 1102 1201 DDQ DDQ . K 7 GOL B 1 1103 1301 GOL GOL . L 8 FUA B 1 1104 1401 FUA FUA . M 9 R16 B 1 1105 1201 R16 R16 . N 3 LMT B 1 1106 4 LMT LMT . O 3 LMT B 1 1107 7 LMT LMT . P 10 PTY C 1 1101 1101 PTY PTY . Q 3 LMT C 1 1102 3 LMT LMT . R 4 SO4 C 1 1103 2 SO4 SO4 . S 11 HOH A 1 1201 15 HOH HOH . S 11 HOH A 2 1202 10 HOH HOH . S 11 HOH A 3 1203 3 HOH HOH . S 11 HOH A 4 1204 22 HOH HOH . S 11 HOH A 5 1205 12 HOH HOH . T 11 HOH B 1 1201 18 HOH HOH . T 11 HOH B 2 1202 1 HOH HOH . T 11 HOH B 3 1203 8 HOH HOH . T 11 HOH B 4 1204 16 HOH HOH . T 11 HOH B 5 1205 17 HOH HOH . T 11 HOH B 6 1206 19 HOH HOH . T 11 HOH B 7 1207 20 HOH HOH . T 11 HOH B 8 1208 6 HOH HOH . T 11 HOH B 9 1209 21 HOH HOH . U 11 HOH C 1 1201 14 HOH HOH . U 11 HOH C 2 1202 9 HOH HOH . U 11 HOH C 3 1203 13 HOH HOH . U 11 HOH C 4 1204 5 HOH HOH . U 11 HOH C 5 1205 2 HOH HOH . U 11 HOH C 6 1206 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . P 10 56.777 -5.766 -79.265 1 98.25 ? C1 PTY 1101 C 1 HETATM 2 C C2 PTY . . . P 10 55.224 -1.54 -75.46 1 105.27 ? C2 PTY 1101 C 1 HETATM 3 C C3 PTY . . . P 10 56.23 -1.555 -76.582 1 105.56 ? C3 PTY 1101 C 1 HETATM 4 O O4 PTY . . . P 10 55.98 -6.959 -79.091 1 99.47 ? O4 PTY 1101 C 1 HETATM 5 C C5 PTY . . . P 10 58.854 -4.632 -78.378 1 99.23 ? C5 PTY 1101 C 1 HETATM 6 C C6 PTY . . . P 10 58.002 -5.882 -78.387 1 97.73 ? C6 PTY 1101 C 1 HETATM 7 O O7 PTY . . . P 10 58.803 -7.001 -78.862 1 95.29 ? O7 PTY 1101 C 1 HETATM 8 C C8 PTY . . . P 10 59.599 -7.627 -77.98 1 92.04 ? C8 PTY 1101 C 1 HETATM 9 O O10 PTY . . . P 10 60.589 -7.103 -77.539 1 91.73 ? O10 PTY 1101 C 1 HETATM 10 C C11 PTY . . . P 10 59.156 -9.013 -77.586 1 90.01 ? C11 PTY 1101 C 1 HETATM 11 C C12 PTY . . . P 10 57.83 -9.434 -78.167 1 88.06 ? C12 PTY 1101 C 1 HETATM 12 C C13 PTY . . . P 10 57.329 -10.765 -77.618 1 86 ? C13 PTY 1101 C 1 HETATM 13 C C14 PTY . . . P 10 57.581 -10.96 -76.143 1 84.58 ? C14 PTY 1101 C 1 HETATM 14 C C15 PTY . . . P 10 56.934 -12.171 -75.526 1 83.63 ? C15 PTY 1101 C 1 HETATM 15 C C16 PTY . . . P 10 57.348 -12.383 -74.092 1 82.54 ? C16 PTY 1101 C 1 HETATM 16 C C17 PTY . . . P 10 56.854 -13.657 -73.461 1 81.84 ? C17 PTY 1101 C 1 HETATM 17 C C18 PTY . . . P 10 57.095 -13.72 -71.973 1 81.67 ? C18 PTY 1101 C 1 HETATM 18 C C19 PTY . . . P 10 56.577 -14.967 -71.305 1 81.75 ? C19 PTY 1101 C 1 HETATM 19 C C20 PTY . . . P 10 57.215 -15.255 -69.969 1 81.99 ? C20 PTY 1101 C 1 HETATM 20 C C21 PTY . . . P 10 56.579 -16.392 -69.207 1 82.74 ? C21 PTY 1101 C 1 HETATM 21 C C22 PTY . . . P 10 57.157 -17.751 -69.519 1 83.61 ? C22 PTY 1101 C 1 HETATM 22 C C23 PTY . . . P 10 56.634 -18.86 -68.639 1 84.55 ? C23 PTY 1101 C 1 HETATM 23 C C24 PTY . . . P 10 57.414 -20.151 -68.735 1 85.2 ? C24 PTY 1101 C 1 HETATM 24 C C25 PTY . . . P 10 56.977 -21.216 -67.752 1 85.64 ? C25 PTY 1101 C 1 HETATM 25 C C26 PTY . . . P 10 58.079 -22.152 -67.307 1 85.16 ? C26 PTY 1101 C 1 HETATM 26 C C27 PTY . . . P 10 57.745 -22.974 -66.081 1 84.46 ? C27 PTY 1101 C 1 HETATM 27 C C28 PTY . . . P 10 58.019 -22.299 -64.756 1 83.69 ? C28 PTY 1101 C 1 HETATM 28 C C29 PTY . . . P 10 58.786 -23.153 -63.772 1 82.77 ? C29 PTY 1101 C 1 HETATM 29 C C30 PTY . . . P 10 54.667 -6.839 -79.266 1 98.09 ? C30 PTY 1101 C 1 HETATM 30 C C31 PTY . . . P 10 54.001 -6.246 -78.049 1 96.01 ? C31 PTY 1101 C 1 HETATM 31 O O30 PTY . . . P 10 54.108 -7.181 -80.276 1 99.04 ? O30 PTY 1101 C 1 HETATM 32 C C32 PTY . . . P 10 52.498 -6.25 -78.11 1 93.77 ? C32 PTY 1101 C 1 HETATM 33 C C33 PTY . . . P 10 51.862 -7.278 -77.187 1 91.94 ? C33 PTY 1101 C 1 HETATM 34 C C34 PTY . . . P 10 52.442 -8.672 -77.294 1 90.37 ? C34 PTY 1101 C 1 HETATM 35 C C35 PTY . . . P 10 51.544 -9.76 -76.761 1 88.95 ? C35 PTY 1101 C 1 HETATM 36 C C36 PTY . . . P 10 51.747 -11.114 -77.401 1 88.04 ? C36 PTY 1101 C 1 HETATM 37 C C37 PTY . . . P 10 52.845 -11.948 -76.775 1 87.24 ? C37 PTY 1101 C 1 HETATM 38 C C38 PTY . . . P 10 52.371 -13.233 -76.128 1 86.14 ? C38 PTY 1101 C 1 HETATM 39 C C39 PTY . . . P 10 53.045 -13.555 -74.816 1 85.4 ? C39 PTY 1101 C 1 HETATM 40 C C40 PTY . . . P 10 52.417 -14.702 -74.058 1 84.51 ? C40 PTY 1101 C 1 HETATM 41 C C41 PTY . . . P 10 52.744 -16.074 -74.605 1 83.65 ? C41 PTY 1101 C 1 HETATM 42 C C42 PTY . . . P 10 53.285 -17.044 -73.579 1 82.98 ? C42 PTY 1101 C 1 HETATM 43 C C43 PTY . . . P 10 52.241 -17.649 -72.676 1 82.33 ? C43 PTY 1101 C 1 HETATM 44 C C44 PTY . . . P 10 52.815 -18.337 -71.46 1 81.68 ? C44 PTY 1101 C 1 HETATM 45 P P1 PTY . . . P 10 58.627 -2.684 -76.606 1 105.84 ? P1 PTY 1101 C 1 HETATM 46 O O11 PTY . . . P 10 57.023 -2.775 -76.536 1 105.84 ? O11 PTY 1101 C 1 HETATM 47 O O12 PTY . . . P 10 59.146 -2.399 -75.224 1 104.62 ? O12 PTY 1101 C 1 HETATM 48 O O13 PTY . . . P 10 59.014 -1.785 -77.748 1 106.61 ? O13 PTY 1101 C 1 HETATM 49 O O14 PTY . . . P 10 59.048 -4.181 -77.008 1 102.26 ? O14 PTY 1101 C 1 HETATM 50 N N1 PTY . . . P 10 55.049 -0.204 -74.885 1 105.29 ? N1 PTY 1101 C 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 47 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #