data_6ZOF # _model_server_result.job_id NZkYJ7CIhi5HiW4nTBv3kA _model_server_result.datetime_utc '2024-11-05 11:05:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":1102}' # _entry.id 6ZOF # _exptl.entry_id 6ZOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOF _cell.length_a 145.1 _cell.length_b 162.327 _cell.length_c 244.852 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 N N N ? 3 O N N ? 3 Q N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 366 n n C1B O1B LMT sing 367 n n C1B O5B LMT sing 368 n n C1B H1B LMT sing 369 n n C2B C3B LMT sing 370 n n C2B O2B LMT sing 371 n n C2B H2B LMT sing 372 n n C3B C4B LMT sing 373 n n C3B O3B LMT sing 374 n n C3B H3B LMT sing 375 n n C4B C5B LMT sing 376 n n C4B O4' LMT sing 377 n n C4B H4B LMT sing 378 n n C5B C6B LMT sing 379 n n C5B O5B LMT sing 380 n n C5B H5B LMT sing 381 n n C6B O6B LMT sing 382 n n C6B "H6'2" LMT sing 383 n n C6B "H6'1" LMT sing 384 n n O1B C4' LMT sing 385 n n O2B H2O1 LMT sing 386 n n O3B H3O1 LMT sing 387 n n O4' H4O1 LMT sing 388 n n O6B H6B LMT sing 389 n n C1' C2' LMT sing 390 n n C1' O1' LMT sing 391 n n C1' O5' LMT sing 392 n n C1' H1' LMT sing 393 n n C2' C3' LMT sing 394 n n C2' O2' LMT sing 395 n n C2' H2' LMT sing 396 n n C3' C4' LMT sing 397 n n C3' O3' LMT sing 398 n n C3' H3' LMT sing 399 n n C4' C5' LMT sing 400 n n C4' H4' LMT sing 401 n n C5' C6' LMT sing 402 n n C5' O5' LMT sing 403 n n C5' H5' LMT sing 404 n n C6' O6' LMT sing 405 n n C6' H6D LMT sing 406 n n C6' H6E LMT sing 407 n n O1' C1 LMT sing 408 n n O2' H2O2 LMT sing 409 n n O3' H3O2 LMT sing 410 n n O6' H6' LMT sing 411 n n C1 C2 LMT sing 412 n n C1 H12 LMT sing 413 n n C1 H11 LMT sing 414 n n C2 C3 LMT sing 415 n n C2 H22 LMT sing 416 n n C2 H21 LMT sing 417 n n C3 C4 LMT sing 418 n n C3 H32 LMT sing 419 n n C3 H31 LMT sing 420 n n C4 C5 LMT sing 421 n n C4 H42 LMT sing 422 n n C4 H41 LMT sing 423 n n C5 C6 LMT sing 424 n n C5 H52 LMT sing 425 n n C5 H51 LMT sing 426 n n C6 C7 LMT sing 427 n n C6 H62 LMT sing 428 n n C6 H61 LMT sing 429 n n C7 C8 LMT sing 430 n n C7 H72 LMT sing 431 n n C7 H71 LMT sing 432 n n C8 C9 LMT sing 433 n n C8 H82 LMT sing 434 n n C8 H81 LMT sing 435 n n C9 C10 LMT sing 436 n n C9 H92 LMT sing 437 n n C9 H91 LMT sing 438 n n C10 C11 LMT sing 439 n n C10 H102 LMT sing 440 n n C10 H101 LMT sing 441 n n C11 C12 LMT sing 442 n n C11 H112 LMT sing 443 n n C11 H111 LMT sing 444 n n C12 H123 LMT sing 445 n n C12 H122 LMT sing 446 n n C12 H121 LMT sing 447 n n # _atom_sites.entry_id 6ZOF _atom_sites.fract_transf_matrix[1][1] 0.006892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 LMT A 1 1101 5 LMT LMT . G 3 LMT A 1 1102 6 LMT LMT . H 4 SO4 A 1 1103 1 SO4 SO4 . I 5 D10 B 1 1101 1101 D10 D10 . J 6 DDQ B 1 1102 1201 DDQ DDQ . K 7 GOL B 1 1103 1301 GOL GOL . L 8 FUA B 1 1104 1401 FUA FUA . M 9 R16 B 1 1105 1201 R16 R16 . N 3 LMT B 1 1106 4 LMT LMT . O 3 LMT B 1 1107 7 LMT LMT . P 10 PTY C 1 1101 1101 PTY PTY . Q 3 LMT C 1 1102 3 LMT LMT . R 4 SO4 C 1 1103 2 SO4 SO4 . S 11 HOH A 1 1201 15 HOH HOH . S 11 HOH A 2 1202 10 HOH HOH . S 11 HOH A 3 1203 3 HOH HOH . S 11 HOH A 4 1204 22 HOH HOH . S 11 HOH A 5 1205 12 HOH HOH . T 11 HOH B 1 1201 18 HOH HOH . T 11 HOH B 2 1202 1 HOH HOH . T 11 HOH B 3 1203 8 HOH HOH . T 11 HOH B 4 1204 16 HOH HOH . T 11 HOH B 5 1205 17 HOH HOH . T 11 HOH B 6 1206 19 HOH HOH . T 11 HOH B 7 1207 20 HOH HOH . T 11 HOH B 8 1208 6 HOH HOH . T 11 HOH B 9 1209 21 HOH HOH . U 11 HOH C 1 1201 14 HOH HOH . U 11 HOH C 2 1202 9 HOH HOH . U 11 HOH C 3 1203 13 HOH HOH . U 11 HOH C 4 1204 5 HOH HOH . U 11 HOH C 5 1205 2 HOH HOH . U 11 HOH C 6 1206 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . Q 3 87.706 2.44 -78.193 1 65.15 ? C1B LMT 1102 C 1 HETATM 2 C C2B LMT . . . Q 3 87.568 3.838 -78.797 1 64.4 ? C2B LMT 1102 C 1 HETATM 3 C C3B LMT . . . Q 3 86.276 3.99 -79.588 1 63.95 ? C3B LMT 1102 C 1 HETATM 4 C C4B LMT . . . Q 3 86.113 2.855 -80.588 1 64.02 ? C4B LMT 1102 C 1 HETATM 5 C C5B LMT . . . Q 3 86.232 1.51 -79.876 1 64.08 ? C5B LMT 1102 C 1 HETATM 6 C C6B LMT . . . Q 3 86.113 0.338 -80.848 1 63.77 ? C6B LMT 1102 C 1 HETATM 7 O O1B LMT . . . Q 3 86.771 2.275 -77.118 1 66.71 ? O1B LMT 1102 C 1 HETATM 8 O O2B LMT . . . Q 3 87.587 4.827 -77.763 1 63.84 ? O2B LMT 1102 C 1 HETATM 9 O O3B LMT . . . Q 3 86.279 5.244 -80.278 1 63.76 ? O3B LMT 1102 C 1 HETATM 10 O O4' LMT . . . Q 3 84.837 2.977 -81.225 1 64.1 ? O4' LMT 1102 C 1 HETATM 11 O O5B LMT . . . Q 3 87.489 1.434 -79.192 1 64.75 ? O5B LMT 1102 C 1 HETATM 12 O O6B LMT . . . Q 3 87.279 0.262 -81.675 1 63.7 ? O6B LMT 1102 C 1 HETATM 13 C C1' LMT . . . Q 3 86.792 1.772 -73.008 1 67.79 ? C1' LMT 1102 C 1 HETATM 14 C C2' LMT . . . Q 3 87.697 2.885 -73.522 1 67.96 ? C2' LMT 1102 C 1 HETATM 15 C C3' LMT . . . Q 3 87.397 3.204 -74.982 1 67.95 ? C3' LMT 1102 C 1 HETATM 16 C C4' LMT . . . Q 3 87.338 1.943 -75.844 1 67.82 ? C4' LMT 1102 C 1 HETATM 17 C C5' LMT . . . Q 3 86.505 0.834 -75.192 1 67.99 ? C5' LMT 1102 C 1 HETATM 18 C C6' LMT . . . Q 3 86.636 -0.486 -75.953 1 67.99 ? C6' LMT 1102 C 1 HETATM 19 O O1' LMT . . . Q 3 87.194 1.439 -71.681 1 67.55 ? O1' LMT 1102 C 1 HETATM 20 O O2' LMT . . . Q 3 87.515 4.06 -72.723 1 67.61 ? O2' LMT 1102 C 1 HETATM 21 O O3' LMT . . . Q 3 88.421 4.074 -75.476 1 68.17 ? O3' LMT 1102 C 1 HETATM 22 O O5' LMT . . . Q 3 86.915 0.618 -73.838 1 67.93 ? O5' LMT 1102 C 1 HETATM 23 O O6' LMT . . . Q 3 85.45 -0.749 -76.711 1 68.19 ? O6' LMT 1102 C 1 HETATM 24 C C1 LMT . . . Q 3 86.183 0.804 -70.897 1 67.32 ? C1 LMT 1102 C 1 HETATM 25 C C2 LMT . . . Q 3 86.488 -0.68 -70.741 1 67.11 ? C2 LMT 1102 C 1 HETATM 26 C C3 LMT . . . Q 3 85.999 -1.201 -69.391 1 66.76 ? C3 LMT 1102 C 1 HETATM 27 C C4 LMT . . . Q 3 85.369 -2.581 -69.524 1 66.3 ? C4 LMT 1102 C 1 HETATM 28 C C5 LMT . . . Q 3 85.217 -3.227 -68.153 1 65.84 ? C5 LMT 1102 C 1 HETATM 29 C C6 LMT . . . Q 3 84.549 -4.593 -68.26 1 65.95 ? C6 LMT 1102 C 1 HETATM 30 C C7 LMT . . . Q 3 85.568 -5.71 -68.472 1 65.86 ? C7 LMT 1102 C 1 HETATM 31 C C8 LMT . . . Q 3 85 -7.057 -68.037 1 65.65 ? C8 LMT 1102 C 1 HETATM 32 C C9 LMT . . . Q 3 86.069 -8.145 -68.07 1 65.28 ? C9 LMT 1102 C 1 HETATM 33 C C10 LMT . . . Q 3 85.682 -9.346 -67.212 1 64.95 ? C10 LMT 1102 C 1 HETATM 34 C C11 LMT . . . Q 3 84.747 -10.289 -67.961 1 64.61 ? C11 LMT 1102 C 1 HETATM 35 C C12 LMT . . . Q 3 85.524 -11.313 -68.759 1 64.37 ? C12 LMT 1102 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 363 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #