data_6ZOF # _model_server_result.job_id uMg4c2tq0r-A0qJ3quT-bA _model_server_result.datetime_utc '2024-11-05 10:58:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1106}' # _entry.id 6ZOF # _exptl.entry_id 6ZOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOF _cell.length_a 145.1 _cell.length_b 162.327 _cell.length_c 244.852 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 G N N ? 3 N N N ? 3 O N N ? 3 Q N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 366 n n C1B O1B LMT sing 367 n n C1B O5B LMT sing 368 n n C1B H1B LMT sing 369 n n C2B C3B LMT sing 370 n n C2B O2B LMT sing 371 n n C2B H2B LMT sing 372 n n C3B C4B LMT sing 373 n n C3B O3B LMT sing 374 n n C3B H3B LMT sing 375 n n C4B C5B LMT sing 376 n n C4B O4' LMT sing 377 n n C4B H4B LMT sing 378 n n C5B C6B LMT sing 379 n n C5B O5B LMT sing 380 n n C5B H5B LMT sing 381 n n C6B O6B LMT sing 382 n n C6B "H6'2" LMT sing 383 n n C6B "H6'1" LMT sing 384 n n O1B C4' LMT sing 385 n n O2B H2O1 LMT sing 386 n n O3B H3O1 LMT sing 387 n n O4' H4O1 LMT sing 388 n n O6B H6B LMT sing 389 n n C1' C2' LMT sing 390 n n C1' O1' LMT sing 391 n n C1' O5' LMT sing 392 n n C1' H1' LMT sing 393 n n C2' C3' LMT sing 394 n n C2' O2' LMT sing 395 n n C2' H2' LMT sing 396 n n C3' C4' LMT sing 397 n n C3' O3' LMT sing 398 n n C3' H3' LMT sing 399 n n C4' C5' LMT sing 400 n n C4' H4' LMT sing 401 n n C5' C6' LMT sing 402 n n C5' O5' LMT sing 403 n n C5' H5' LMT sing 404 n n C6' O6' LMT sing 405 n n C6' H6D LMT sing 406 n n C6' H6E LMT sing 407 n n O1' C1 LMT sing 408 n n O2' H2O2 LMT sing 409 n n O3' H3O2 LMT sing 410 n n O6' H6' LMT sing 411 n n C1 C2 LMT sing 412 n n C1 H12 LMT sing 413 n n C1 H11 LMT sing 414 n n C2 C3 LMT sing 415 n n C2 H22 LMT sing 416 n n C2 H21 LMT sing 417 n n C3 C4 LMT sing 418 n n C3 H32 LMT sing 419 n n C3 H31 LMT sing 420 n n C4 C5 LMT sing 421 n n C4 H42 LMT sing 422 n n C4 H41 LMT sing 423 n n C5 C6 LMT sing 424 n n C5 H52 LMT sing 425 n n C5 H51 LMT sing 426 n n C6 C7 LMT sing 427 n n C6 H62 LMT sing 428 n n C6 H61 LMT sing 429 n n C7 C8 LMT sing 430 n n C7 H72 LMT sing 431 n n C7 H71 LMT sing 432 n n C8 C9 LMT sing 433 n n C8 H82 LMT sing 434 n n C8 H81 LMT sing 435 n n C9 C10 LMT sing 436 n n C9 H92 LMT sing 437 n n C9 H91 LMT sing 438 n n C10 C11 LMT sing 439 n n C10 H102 LMT sing 440 n n C10 H101 LMT sing 441 n n C11 C12 LMT sing 442 n n C11 H112 LMT sing 443 n n C11 H111 LMT sing 444 n n C12 H123 LMT sing 445 n n C12 H122 LMT sing 446 n n C12 H121 LMT sing 447 n n # _atom_sites.entry_id 6ZOF _atom_sites.fract_transf_matrix[1][1] 0.006892 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 LMT A 1 1101 5 LMT LMT . G 3 LMT A 1 1102 6 LMT LMT . H 4 SO4 A 1 1103 1 SO4 SO4 . I 5 D10 B 1 1101 1101 D10 D10 . J 6 DDQ B 1 1102 1201 DDQ DDQ . K 7 GOL B 1 1103 1301 GOL GOL . L 8 FUA B 1 1104 1401 FUA FUA . M 9 R16 B 1 1105 1201 R16 R16 . N 3 LMT B 1 1106 4 LMT LMT . O 3 LMT B 1 1107 7 LMT LMT . P 10 PTY C 1 1101 1101 PTY PTY . Q 3 LMT C 1 1102 3 LMT LMT . R 4 SO4 C 1 1103 2 SO4 SO4 . S 11 HOH A 1 1201 15 HOH HOH . S 11 HOH A 2 1202 10 HOH HOH . S 11 HOH A 3 1203 3 HOH HOH . S 11 HOH A 4 1204 22 HOH HOH . S 11 HOH A 5 1205 12 HOH HOH . T 11 HOH B 1 1201 18 HOH HOH . T 11 HOH B 2 1202 1 HOH HOH . T 11 HOH B 3 1203 8 HOH HOH . T 11 HOH B 4 1204 16 HOH HOH . T 11 HOH B 5 1205 17 HOH HOH . T 11 HOH B 6 1206 19 HOH HOH . T 11 HOH B 7 1207 20 HOH HOH . T 11 HOH B 8 1208 6 HOH HOH . T 11 HOH B 9 1209 21 HOH HOH . U 11 HOH C 1 1201 14 HOH HOH . U 11 HOH C 2 1202 9 HOH HOH . U 11 HOH C 3 1203 13 HOH HOH . U 11 HOH C 4 1204 5 HOH HOH . U 11 HOH C 5 1205 2 HOH HOH . U 11 HOH C 6 1206 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . N 3 0.984 -9.464 -88.002 1 88.12 ? C1B LMT 1106 B 1 HETATM 2 C C2B LMT . . . N 3 0.988 -8.033 -88.535 1 87.65 ? C2B LMT 1106 B 1 HETATM 3 C C3B LMT . . . N 3 0.691 -7.034 -87.425 1 87.72 ? C3B LMT 1106 B 1 HETATM 4 C C4B LMT . . . N 3 -0.595 -7.402 -86.698 1 88.27 ? C4B LMT 1106 B 1 HETATM 5 C C5B LMT . . . N 3 -0.527 -8.85 -86.219 1 88.89 ? C5B LMT 1106 B 1 HETATM 6 C C6B LMT . . . N 3 -1.825 -9.298 -85.554 1 89.34 ? C6B LMT 1106 B 1 HETATM 7 O O1B LMT . . . N 3 2.091 -9.665 -87.115 1 88.41 ? O1B LMT 1106 B 1 HETATM 8 O O2B LMT . . . N 3 2.261 -7.737 -89.121 1 87.28 ? O2B LMT 1106 B 1 HETATM 9 O O3B LMT . . . N 3 0.573 -5.718 -87.976 1 87.72 ? O3B LMT 1106 B 1 HETATM 10 O O4' LMT . . . N 3 -0.776 -6.517 -85.587 1 87.98 ? O4' LMT 1106 B 1 HETATM 11 O O5B LMT . . . N 3 -0.246 -9.727 -87.318 1 88.94 ? O5B LMT 1106 B 1 HETATM 12 O O6B LMT . . . N 3 -2.894 -9.338 -86.508 1 89.76 ? O6B LMT 1106 B 1 HETATM 13 C C1' LMT . . . N 3 4.996 -12.595 -86.575 1 87.26 ? C1' LMT 1106 B 1 HETATM 14 C C2' LMT . . . N 3 4.791 -12.115 -88.006 1 87.27 ? C2' LMT 1106 B 1 HETATM 15 C C3' LMT . . . N 3 3.992 -10.819 -88.027 1 87.81 ? C3' LMT 1106 B 1 HETATM 16 C C4' LMT . . . N 3 2.709 -10.954 -87.213 1 88.06 ? C4' LMT 1106 B 1 HETATM 17 C C5' LMT . . . N 3 2.999 -11.515 -85.82 1 87.72 ? C5' LMT 1106 B 1 HETATM 18 C C6' LMT . . . N 3 1.719 -11.806 -85.044 1 87.69 ? C6' LMT 1106 B 1 HETATM 19 O O1' LMT . . . N 3 5.642 -13.868 -86.618 1 88.07 ? O1' LMT 1106 B 1 HETATM 20 O O2' LMT . . . N 3 6.065 -11.919 -88.631 1 86.27 ? O2' LMT 1106 B 1 HETATM 21 O O3' LMT . . . N 3 3.676 -10.48 -89.382 1 88.76 ? O3' LMT 1106 B 1 HETATM 22 O O5' LMT . . . N 3 3.738 -12.735 -85.918 1 87.19 ? O5' LMT 1106 B 1 HETATM 23 O O6' LMT . . . N 3 1.971 -11.689 -83.64 1 87.18 ? O6' LMT 1106 B 1 HETATM 24 C C1 LMT . . . N 3 6.788 -13.997 -85.778 1 88.94 ? C1 LMT 1106 B 1 HETATM 25 C C2 LMT . . . N 3 6.535 -15.049 -84.708 1 89.72 ? C2 LMT 1106 B 1 HETATM 26 C C3 LMT . . . N 3 7.603 -16.138 -84.726 1 90.29 ? C3 LMT 1106 B 1 HETATM 27 C C4 LMT . . . N 3 7.214 -17.298 -83.816 1 90.97 ? C4 LMT 1106 B 1 HETATM 28 C C5 LMT . . . N 3 7.241 -16.888 -82.346 1 91.72 ? C5 LMT 1106 B 1 HETATM 29 C C6 LMT . . . N 3 7.095 -18.099 -81.433 1 92.26 ? C6 LMT 1106 B 1 HETATM 30 C C7 LMT . . . N 3 8.443 -18.762 -81.173 1 92.44 ? C7 LMT 1106 B 1 HETATM 31 C C8 LMT . . . N 3 8.265 -20.184 -80.65 1 92.19 ? C8 LMT 1106 B 1 HETATM 32 C C9 LMT . . . N 3 8.374 -21.221 -81.763 1 91.37 ? C9 LMT 1106 B 1 HETATM 33 C C10 LMT . . . N 3 8.226 -22.637 -81.21 1 90.4 ? C10 LMT 1106 B 1 HETATM 34 C C11 LMT . . . N 3 6.901 -23.273 -81.617 1 89.41 ? C11 LMT 1106 B 1 HETATM 35 C C12 LMT . . . N 3 6.995 -23.883 -82.998 1 88.65 ? C12 LMT 1106 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 58 _model_server_stats.query_time_ms 355 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #