data_6ZOG # _model_server_result.job_id m-fZT9XiMGdyg-tzIorrCA _model_server_result.datetime_utc '2024-11-17 00:23:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1101}' # _entry.id 6ZOG # _exptl.entry_id 6ZOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZOG _cell.length_a 145.965 _cell.length_b 161.954 _cell.length_c 245.288 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 W N N # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 493 n n C1B O1B LMT sing 494 n n C1B O5B LMT sing 495 n n C1B H1B LMT sing 496 n n C2B C3B LMT sing 497 n n C2B O2B LMT sing 498 n n C2B H2B LMT sing 499 n n C3B C4B LMT sing 500 n n C3B O3B LMT sing 501 n n C3B H3B LMT sing 502 n n C4B C5B LMT sing 503 n n C4B O4' LMT sing 504 n n C4B H4B LMT sing 505 n n C5B C6B LMT sing 506 n n C5B O5B LMT sing 507 n n C5B H5B LMT sing 508 n n C6B O6B LMT sing 509 n n C6B "H6'2" LMT sing 510 n n C6B "H6'1" LMT sing 511 n n O1B C4' LMT sing 512 n n O2B H2O1 LMT sing 513 n n O3B H3O1 LMT sing 514 n n O4' H4O1 LMT sing 515 n n O6B H6B LMT sing 516 n n C1' C2' LMT sing 517 n n C1' O1' LMT sing 518 n n C1' O5' LMT sing 519 n n C1' H1' LMT sing 520 n n C2' C3' LMT sing 521 n n C2' O2' LMT sing 522 n n C2' H2' LMT sing 523 n n C3' C4' LMT sing 524 n n C3' O3' LMT sing 525 n n C3' H3' LMT sing 526 n n C4' C5' LMT sing 527 n n C4' H4' LMT sing 528 n n C5' C6' LMT sing 529 n n C5' O5' LMT sing 530 n n C5' H5' LMT sing 531 n n C6' O6' LMT sing 532 n n C6' H6D LMT sing 533 n n C6' H6E LMT sing 534 n n O1' C1 LMT sing 535 n n O2' H2O2 LMT sing 536 n n O3' H3O2 LMT sing 537 n n O6' H6' LMT sing 538 n n C1 C2 LMT sing 539 n n C1 H12 LMT sing 540 n n C1 H11 LMT sing 541 n n C2 C3 LMT sing 542 n n C2 H22 LMT sing 543 n n C2 H21 LMT sing 544 n n C3 C4 LMT sing 545 n n C3 H32 LMT sing 546 n n C3 H31 LMT sing 547 n n C4 C5 LMT sing 548 n n C4 H42 LMT sing 549 n n C4 H41 LMT sing 550 n n C5 C6 LMT sing 551 n n C5 H52 LMT sing 552 n n C5 H51 LMT sing 553 n n C6 C7 LMT sing 554 n n C6 H62 LMT sing 555 n n C6 H61 LMT sing 556 n n C7 C8 LMT sing 557 n n C7 H72 LMT sing 558 n n C7 H71 LMT sing 559 n n C8 C9 LMT sing 560 n n C8 H82 LMT sing 561 n n C8 H81 LMT sing 562 n n C9 C10 LMT sing 563 n n C9 H92 LMT sing 564 n n C9 H91 LMT sing 565 n n C10 C11 LMT sing 566 n n C10 H102 LMT sing 567 n n C10 H101 LMT sing 568 n n C11 C12 LMT sing 569 n n C11 H112 LMT sing 570 n n C11 H111 LMT sing 571 n n C12 H123 LMT sing 572 n n C12 H122 LMT sing 573 n n C12 H121 LMT sing 574 n n # _atom_sites.entry_id 6ZOG _atom_sites.fract_transf_matrix[1][1] 0.006851 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004077 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 LMT A 1 1101 1101 LMT LMT . G 4 D10 A 1 1102 1201 D10 D10 . H 3 LMT A 1 1103 1401 LMT LMT . I 5 EDO A 1 1104 1501 EDO EDO . J 3 LMT A 1 1105 1801 LMT LMT . K 3 LMT A 1 1106 1401 LMT LMT . L 3 LMT B 1 1101 1101 LMT LMT . M 6 DDR B 1 1102 1201 DDR DDR . N 7 MYS B 1 1103 1301 MYS MYS . O 8 8K6 B 1 1104 1401 8K6 8K6 . P 9 MIY B 1 1105 1501 MIY MIY . Q 10 GOL B 1 1106 1601 GOL GOL . R 11 OCT B 1 1107 1701 OCT OCT . S 5 EDO B 1 1108 2001 EDO EDO . T 12 SO4 B 1 1109 2 SO4 SO4 . U 12 SO4 B 1 1110 3 SO4 SO4 . V 13 D12 C 1 1301 1301 D12 D12 . W 3 LMT C 1 1302 1101 LMT LMT . X 4 D10 C 1 1303 1201 D10 D10 . Y 14 PTY C 1 1304 1301 PTY PTY . Z 15 C14 C 1 1305 1501 C14 C14 . AA 5 EDO C 1 1306 1601 EDO EDO . BA 5 EDO C 1 1307 1801 EDO EDO . CA 10 GOL C 1 1308 1901 GOL GOL . DA 10 GOL C 1 1309 2001 GOL GOL . EA 10 GOL C 1 1310 2101 GOL GOL . FA 16 DDQ C 1 1311 2201 DDQ DDQ . GA 12 SO4 C 1 1312 1 SO4 SO4 . HA 10 GOL D 1 201 201 GOL GOL . IA 5 EDO E 1 201 201 EDO EDO . JA 5 EDO E 1 202 301 EDO EDO . KA 17 HOH A 1 1201 34 HOH HOH . KA 17 HOH A 2 1202 88 HOH HOH . KA 17 HOH A 3 1203 92 HOH HOH . KA 17 HOH A 4 1204 10 HOH HOH . KA 17 HOH A 5 1205 43 HOH HOH . KA 17 HOH A 6 1206 63 HOH HOH . KA 17 HOH A 7 1207 89 HOH HOH . KA 17 HOH A 8 1208 100 HOH HOH . KA 17 HOH A 9 1209 42 HOH HOH . KA 17 HOH A 10 1210 41 HOH HOH . KA 17 HOH A 11 1211 9 HOH HOH . KA 17 HOH A 12 1212 126 HOH HOH . KA 17 HOH A 13 1213 82 HOH HOH . KA 17 HOH A 14 1214 77 HOH HOH . KA 17 HOH A 15 1215 67 HOH HOH . KA 17 HOH A 16 1216 83 HOH HOH . KA 17 HOH A 17 1217 66 HOH HOH . KA 17 HOH A 18 1218 24 HOH HOH . KA 17 HOH A 19 1219 99 HOH HOH . KA 17 HOH A 20 1220 46 HOH HOH . KA 17 HOH A 21 1221 85 HOH HOH . KA 17 HOH A 22 1222 1 HOH HOH . KA 17 HOH A 23 1223 78 HOH HOH . KA 17 HOH A 24 1224 101 HOH HOH . KA 17 HOH A 25 1225 14 HOH HOH . KA 17 HOH A 26 1226 79 HOH HOH . KA 17 HOH A 27 1227 75 HOH HOH . KA 17 HOH A 28 1228 16 HOH HOH . KA 17 HOH A 29 1229 57 HOH HOH . KA 17 HOH A 30 1230 61 HOH HOH . KA 17 HOH A 31 1231 76 HOH HOH . KA 17 HOH A 32 1232 86 HOH HOH . KA 17 HOH A 33 1233 102 HOH HOH . KA 17 HOH A 34 1234 40 HOH HOH . KA 17 HOH A 35 1235 65 HOH HOH . KA 17 HOH A 36 1236 94 HOH HOH . KA 17 HOH A 37 1237 62 HOH HOH . KA 17 HOH A 38 1238 7 HOH HOH . KA 17 HOH A 39 1239 52 HOH HOH . KA 17 HOH A 40 1240 87 HOH HOH . KA 17 HOH A 41 1241 38 HOH HOH . KA 17 HOH A 42 1242 81 HOH HOH . KA 17 HOH A 43 1243 68 HOH HOH . KA 17 HOH A 44 1244 39 HOH HOH . KA 17 HOH A 45 1245 80 HOH HOH . KA 17 HOH A 46 1246 56 HOH HOH . KA 17 HOH A 47 1247 50 HOH HOH . KA 17 HOH A 48 1248 33 HOH HOH . KA 17 HOH A 49 1249 91 HOH HOH . LA 17 HOH B 1 1201 112 HOH HOH . LA 17 HOH B 2 1202 64 HOH HOH . LA 17 HOH B 3 1203 111 HOH HOH . LA 17 HOH B 4 1204 93 HOH HOH . LA 17 HOH B 5 1205 12 HOH HOH . LA 17 HOH B 6 1206 103 HOH HOH . LA 17 HOH B 7 1207 114 HOH HOH . LA 17 HOH B 8 1208 110 HOH HOH . LA 17 HOH B 9 1209 6 HOH HOH . LA 17 HOH B 10 1210 135 HOH HOH . LA 17 HOH B 11 1211 113 HOH HOH . LA 17 HOH B 12 1212 11 HOH HOH . LA 17 HOH B 13 1213 5 HOH HOH . LA 17 HOH B 14 1214 22 HOH HOH . LA 17 HOH B 15 1215 55 HOH HOH . LA 17 HOH B 16 1216 8 HOH HOH . LA 17 HOH B 17 1217 20 HOH HOH . LA 17 HOH B 18 1218 115 HOH HOH . LA 17 HOH B 19 1219 44 HOH HOH . LA 17 HOH B 20 1220 104 HOH HOH . LA 17 HOH B 21 1221 121 HOH HOH . LA 17 HOH B 22 1222 109 HOH HOH . LA 17 HOH B 23 1223 70 HOH HOH . LA 17 HOH B 24 1224 53 HOH HOH . LA 17 HOH B 25 1225 123 HOH HOH . LA 17 HOH B 26 1226 120 HOH HOH . LA 17 HOH B 27 1227 116 HOH HOH . LA 17 HOH B 28 1228 45 HOH HOH . LA 17 HOH B 29 1229 90 HOH HOH . LA 17 HOH B 30 1230 72 HOH HOH . LA 17 HOH B 31 1231 49 HOH HOH . LA 17 HOH B 32 1232 117 HOH HOH . LA 17 HOH B 33 1233 51 HOH HOH . LA 17 HOH B 34 1234 105 HOH HOH . LA 17 HOH B 35 1235 122 HOH HOH . MA 17 HOH C 1 1401 30 HOH HOH . MA 17 HOH C 2 1402 98 HOH HOH . MA 17 HOH C 3 1403 125 HOH HOH . MA 17 HOH C 4 1404 59 HOH HOH . MA 17 HOH C 5 1405 36 HOH HOH . MA 17 HOH C 6 1406 28 HOH HOH . MA 17 HOH C 7 1407 2 HOH HOH . MA 17 HOH C 8 1408 130 HOH HOH . MA 17 HOH C 9 1409 124 HOH HOH . MA 17 HOH C 10 1410 18 HOH HOH . MA 17 HOH C 11 1411 17 HOH HOH . MA 17 HOH C 12 1412 106 HOH HOH . MA 17 HOH C 13 1413 13 HOH HOH . MA 17 HOH C 14 1414 29 HOH HOH . MA 17 HOH C 15 1415 21 HOH HOH . MA 17 HOH C 16 1416 27 HOH HOH . MA 17 HOH C 17 1417 95 HOH HOH . MA 17 HOH C 18 1418 132 HOH HOH . MA 17 HOH C 19 1419 96 HOH HOH . MA 17 HOH C 20 1420 26 HOH HOH . MA 17 HOH C 21 1421 128 HOH HOH . MA 17 HOH C 22 1422 69 HOH HOH . MA 17 HOH C 23 1423 32 HOH HOH . MA 17 HOH C 24 1424 15 HOH HOH . MA 17 HOH C 25 1425 23 HOH HOH . MA 17 HOH C 26 1426 71 HOH HOH . MA 17 HOH C 27 1427 58 HOH HOH . MA 17 HOH C 28 1428 127 HOH HOH . MA 17 HOH C 29 1429 107 HOH HOH . MA 17 HOH C 30 1430 37 HOH HOH . MA 17 HOH C 31 1431 134 HOH HOH . MA 17 HOH C 32 1432 74 HOH HOH . MA 17 HOH C 33 1433 131 HOH HOH . MA 17 HOH C 34 1434 97 HOH HOH . MA 17 HOH C 35 1435 31 HOH HOH . MA 17 HOH C 36 1436 108 HOH HOH . MA 17 HOH C 37 1437 25 HOH HOH . MA 17 HOH C 38 1438 35 HOH HOH . MA 17 HOH C 39 1439 54 HOH HOH . MA 17 HOH C 40 1440 129 HOH HOH . MA 17 HOH C 41 1441 73 HOH HOH . MA 17 HOH C 42 1442 133 HOH HOH . MA 17 HOH C 43 1443 60 HOH HOH . NA 17 HOH D 1 301 118 HOH HOH . NA 17 HOH D 2 302 84 HOH HOH . NA 17 HOH D 3 303 48 HOH HOH . NA 17 HOH D 4 304 119 HOH HOH . NA 17 HOH D 5 305 47 HOH HOH . OA 17 HOH E 1 301 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . F 3 30.75 42.73 -22.029 1 124.44 ? C1B LMT 1101 A 1 HETATM 2 C C2B LMT . . . F 3 30.376 43.888 -22.956 1 124.24 ? C2B LMT 1101 A 1 HETATM 3 C C3B LMT . . . F 3 31.494 44.2 -23.943 1 124.41 ? C3B LMT 1101 A 1 HETATM 4 C C4B LMT . . . F 3 32.808 44.394 -23.199 1 124.93 ? C4B LMT 1101 A 1 HETATM 5 C C5B LMT . . . F 3 33.11 43.171 -22.339 1 125.01 ? C5B LMT 1101 A 1 HETATM 6 C C6B LMT . . . F 3 34.427 43.354 -21.584 1 125.07 ? C6B LMT 1101 A 1 HETATM 7 O O1B LMT . . . F 3 30.757 41.5 -22.766 1 124.32 ? O1B LMT 1101 A 1 HETATM 8 O O2B LMT . . . F 3 29.18 43.568 -23.677 1 123.32 ? O2B LMT 1101 A 1 HETATM 9 O O3B LMT . . . F 3 31.171 45.383 -24.681 1 124.26 ? O3B LMT 1101 A 1 HETATM 10 O O4' LMT . . . F 3 33.873 44.616 -24.13 1 123.82 ? O4' LMT 1101 A 1 HETATM 11 O O5B LMT . . . F 3 32.031 42.952 -21.422 1 124.54 ? O5B LMT 1101 A 1 HETATM 12 O O6B LMT . . . F 3 34.427 42.598 -20.367 1 125.24 ? O6B LMT 1101 A 1 HETATM 13 C C1' LMT . . . F 3 28.987 37.749 -21.974 1 122.79 ? C1' LMT 1101 A 1 HETATM 14 C C2' LMT . . . F 3 28.052 38.952 -22.117 1 122.86 ? C2' LMT 1101 A 1 HETATM 15 C C3' LMT . . . F 3 28.743 40.147 -22.769 1 123.47 ? C3' LMT 1101 A 1 HETATM 16 C C4' LMT . . . F 3 30.093 40.412 -22.112 1 124.16 ? C4' LMT 1101 A 1 HETATM 17 C C5' LMT . . . F 3 30.926 39.136 -22.175 1 123.83 ? C5' LMT 1101 A 1 HETATM 18 C C6' LMT . . . F 3 32.335 39.319 -21.62 1 123.73 ? C6' LMT 1101 A 1 HETATM 19 O O1' LMT . . . F 3 28.393 36.789 -21.095 1 122.12 ? O1' LMT 1101 A 1 HETATM 20 O O2' LMT . . . F 3 26.919 38.577 -22.909 1 121.5 ? O2' LMT 1101 A 1 HETATM 21 O O3' LMT . . . F 3 27.909 41.306 -22.659 1 123.75 ? O3' LMT 1101 A 1 HETATM 22 O O5' LMT . . . F 3 30.251 38.129 -21.421 1 123.13 ? O5' LMT 1101 A 1 HETATM 23 O O6' LMT . . . F 3 32.279 39.696 -20.239 1 123.59 ? O6' LMT 1101 A 1 HETATM 24 C C1 LMT . . . F 3 28.065 35.545 -21.715 1 121.96 ? C1 LMT 1101 A 1 HETATM 25 C C2 LMT . . . F 3 28.069 34.419 -20.688 1 122.11 ? C2 LMT 1101 A 1 HETATM 26 C C3 LMT . . . F 3 27.671 33.104 -21.351 1 122.64 ? C3 LMT 1101 A 1 HETATM 27 C C4 LMT . . . F 3 28.048 31.89 -20.506 1 122.86 ? C4 LMT 1101 A 1 HETATM 28 C C5 LMT . . . F 3 29.549 31.608 -20.54 1 123.34 ? C5 LMT 1101 A 1 HETATM 29 C C6 LMT . . . F 3 29.862 30.117 -20.419 1 123.35 ? C6 LMT 1101 A 1 HETATM 30 C C7 LMT . . . F 3 30.966 29.852 -19.398 1 123.38 ? C7 LMT 1101 A 1 HETATM 31 C C8 LMT . . . F 3 30.451 29.954 -17.964 1 123.54 ? C8 LMT 1101 A 1 HETATM 32 C C9 LMT . . . F 3 30.793 28.702 -17.161 1 123.49 ? C9 LMT 1101 A 1 HETATM 33 C C10 LMT . . . F 3 30.461 28.87 -15.679 1 123.01 ? C10 LMT 1101 A 1 HETATM 34 C C11 LMT . . . F 3 29.263 28.02 -15.264 1 122.62 ? C11 LMT 1101 A 1 HETATM 35 C C12 LMT . . . F 3 27.975 28.553 -15.854 1 122.13 ? C12 LMT 1101 A 1 # _model_server_stats.io_time_ms 79 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 35 #