data_6ZPJ # _model_server_result.job_id oYKx64BYb3xIKPOr0hkixw _model_server_result.datetime_utc '2024-10-19 16:42:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zpj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 6ZPJ # _exptl.entry_id 6ZPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.17 _cell.angle_gamma 90 _cell.entry_id 6ZPJ _cell.length_a 31.31 _cell.length_b 37.71 _cell.length_c 122.39 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 6ZPJ _atom_sites.fract_transf_matrix[1][1] 0.031939 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00121 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026518 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MPD A 1 801 801 MPD MPD . D 3 IMD A 1 802 401 IMD IMD . E 3 IMD A 1 803 2 IMD IMD . F 2 MPD B 1 701 701 MPD MPD . G 4 HOH A 1 901 45 HOH HOH . G 4 HOH A 2 902 145 HOH HOH . G 4 HOH A 3 903 79 HOH HOH . G 4 HOH A 4 904 123 HOH HOH . G 4 HOH A 5 905 188 HOH HOH . G 4 HOH A 6 906 5 HOH HOH . G 4 HOH A 7 907 84 HOH HOH . G 4 HOH A 8 908 58 HOH HOH . G 4 HOH A 9 909 127 HOH HOH . G 4 HOH A 10 910 64 HOH HOH . G 4 HOH A 11 911 299 HOH HOH . G 4 HOH A 12 912 35 HOH HOH . G 4 HOH A 13 913 100 HOH HOH . G 4 HOH A 14 914 164 HOH HOH . G 4 HOH A 15 915 246 HOH HOH . G 4 HOH A 16 916 42 HOH HOH . G 4 HOH A 17 917 149 HOH HOH . G 4 HOH A 18 918 187 HOH HOH . G 4 HOH A 19 919 23 HOH HOH . G 4 HOH A 20 920 1 HOH HOH . G 4 HOH A 21 921 32 HOH HOH . G 4 HOH A 22 922 247 HOH HOH . G 4 HOH A 23 923 12 HOH HOH . G 4 HOH A 24 924 148 HOH HOH . G 4 HOH A 25 925 128 HOH HOH . G 4 HOH A 26 926 171 HOH HOH . G 4 HOH A 27 927 225 HOH HOH . G 4 HOH A 28 928 163 HOH HOH . G 4 HOH A 29 929 151 HOH HOH . G 4 HOH A 30 930 117 HOH HOH . G 4 HOH A 31 931 92 HOH HOH . G 4 HOH A 32 932 133 HOH HOH . G 4 HOH A 33 933 114 HOH HOH . G 4 HOH A 34 934 282 HOH HOH . G 4 HOH A 35 935 195 HOH HOH . G 4 HOH A 36 936 242 HOH HOH . G 4 HOH A 37 937 18 HOH HOH . G 4 HOH A 38 938 24 HOH HOH . G 4 HOH A 39 939 158 HOH HOH . G 4 HOH A 40 940 77 HOH HOH . G 4 HOH A 41 941 10 HOH HOH . G 4 HOH A 42 942 28 HOH HOH . G 4 HOH A 43 943 38 HOH HOH . G 4 HOH A 44 944 31 HOH HOH . G 4 HOH A 45 945 7 HOH HOH . G 4 HOH A 46 946 16 HOH HOH . G 4 HOH A 47 947 6 HOH HOH . G 4 HOH A 48 948 96 HOH HOH . G 4 HOH A 49 949 277 HOH HOH . G 4 HOH A 50 950 118 HOH HOH . G 4 HOH A 51 951 173 HOH HOH . G 4 HOH A 52 952 266 HOH HOH . G 4 HOH A 53 953 113 HOH HOH . G 4 HOH A 54 954 109 HOH HOH . G 4 HOH A 55 955 147 HOH HOH . G 4 HOH A 56 956 306 HOH HOH . G 4 HOH A 57 957 131 HOH HOH . G 4 HOH A 58 958 121 HOH HOH . G 4 HOH A 59 959 108 HOH HOH . G 4 HOH A 60 960 140 HOH HOH . G 4 HOH A 61 961 167 HOH HOH . G 4 HOH A 62 962 59 HOH HOH . G 4 HOH A 63 963 257 HOH HOH . G 4 HOH A 64 964 137 HOH HOH . G 4 HOH A 65 965 87 HOH HOH . G 4 HOH A 66 966 260 HOH HOH . G 4 HOH A 67 967 283 HOH HOH . G 4 HOH A 68 968 36 HOH HOH . G 4 HOH A 69 969 161 HOH HOH . G 4 HOH A 70 970 53 HOH HOH . G 4 HOH A 71 971 82 HOH HOH . G 4 HOH A 72 972 294 HOH HOH . G 4 HOH A 73 973 75 HOH HOH . G 4 HOH A 74 974 274 HOH HOH . G 4 HOH A 75 975 156 HOH HOH . G 4 HOH A 76 976 78 HOH HOH . G 4 HOH A 77 977 272 HOH HOH . G 4 HOH A 78 978 175 HOH HOH . G 4 HOH A 79 979 305 HOH HOH . G 4 HOH A 80 980 26 HOH HOH . G 4 HOH A 81 981 191 HOH HOH . G 4 HOH A 82 982 56 HOH HOH . G 4 HOH A 83 983 217 HOH HOH . G 4 HOH A 84 984 130 HOH HOH . G 4 HOH A 85 985 159 HOH HOH . G 4 HOH A 86 986 251 HOH HOH . G 4 HOH A 87 987 292 HOH HOH . G 4 HOH A 88 988 189 HOH HOH . G 4 HOH A 89 989 91 HOH HOH . G 4 HOH A 90 990 181 HOH HOH . G 4 HOH A 91 991 258 HOH HOH . G 4 HOH A 92 992 170 HOH HOH . G 4 HOH A 93 993 278 HOH HOH . G 4 HOH A 94 994 129 HOH HOH . G 4 HOH A 95 995 111 HOH HOH . G 4 HOH A 96 996 229 HOH HOH . G 4 HOH A 97 997 125 HOH HOH . G 4 HOH A 98 998 271 HOH HOH . G 4 HOH A 99 999 83 HOH HOH . G 4 HOH A 100 1000 280 HOH HOH . G 4 HOH A 101 1001 29 HOH HOH . G 4 HOH A 102 1002 185 HOH HOH . G 4 HOH A 103 1003 270 HOH HOH . G 4 HOH A 104 1004 154 HOH HOH . G 4 HOH A 105 1005 152 HOH HOH . G 4 HOH A 106 1006 286 HOH HOH . G 4 HOH A 107 1007 303 HOH HOH . G 4 HOH A 108 1008 268 HOH HOH . G 4 HOH A 109 1009 244 HOH HOH . G 4 HOH A 110 1010 136 HOH HOH . G 4 HOH A 111 1011 233 HOH HOH . G 4 HOH A 112 1012 290 HOH HOH . G 4 HOH A 113 1013 205 HOH HOH . G 4 HOH A 114 1014 174 HOH HOH . G 4 HOH A 115 1015 279 HOH HOH . G 4 HOH A 116 1016 153 HOH HOH . G 4 HOH A 117 1017 63 HOH HOH . G 4 HOH A 118 1018 284 HOH HOH . G 4 HOH A 119 1019 101 HOH HOH . G 4 HOH A 120 1020 228 HOH HOH . G 4 HOH A 121 1021 248 HOH HOH . G 4 HOH A 122 1022 68 HOH HOH . G 4 HOH A 123 1023 275 HOH HOH . G 4 HOH A 124 1024 276 HOH HOH . G 4 HOH A 125 1025 144 HOH HOH . G 4 HOH A 126 1026 194 HOH HOH . G 4 HOH A 127 1027 142 HOH HOH . G 4 HOH A 128 1028 47 HOH HOH . G 4 HOH A 129 1029 74 HOH HOH . G 4 HOH A 130 1030 98 HOH HOH . G 4 HOH A 131 1031 300 HOH HOH . G 4 HOH A 132 1032 110 HOH HOH . G 4 HOH A 133 1033 289 HOH HOH . G 4 HOH A 134 1034 249 HOH HOH . G 4 HOH A 135 1035 287 HOH HOH . G 4 HOH A 136 1036 302 HOH HOH . H 4 HOH B 1 801 262 HOH HOH . H 4 HOH B 2 802 206 HOH HOH . H 4 HOH B 3 803 17 HOH HOH . H 4 HOH B 4 804 93 HOH HOH . H 4 HOH B 5 805 81 HOH HOH . H 4 HOH B 6 806 44 HOH HOH . H 4 HOH B 7 807 212 HOH HOH . H 4 HOH B 8 808 72 HOH HOH . H 4 HOH B 9 809 200 HOH HOH . H 4 HOH B 10 810 215 HOH HOH . H 4 HOH B 11 811 219 HOH HOH . H 4 HOH B 12 812 50 HOH HOH . H 4 HOH B 13 813 162 HOH HOH . H 4 HOH B 14 814 22 HOH HOH . H 4 HOH B 15 815 15 HOH HOH . H 4 HOH B 16 816 9 HOH HOH . H 4 HOH B 17 817 180 HOH HOH . H 4 HOH B 18 818 11 HOH HOH . H 4 HOH B 19 819 76 HOH HOH . H 4 HOH B 20 820 39 HOH HOH . H 4 HOH B 21 821 103 HOH HOH . H 4 HOH B 22 822 139 HOH HOH . H 4 HOH B 23 823 73 HOH HOH . H 4 HOH B 24 824 4 HOH HOH . H 4 HOH B 25 825 2 HOH HOH . H 4 HOH B 26 826 207 HOH HOH . H 4 HOH B 27 827 37 HOH HOH . H 4 HOH B 28 828 182 HOH HOH . H 4 HOH B 29 829 88 HOH HOH . H 4 HOH B 30 830 14 HOH HOH . H 4 HOH B 31 831 66 HOH HOH . H 4 HOH B 32 832 46 HOH HOH . H 4 HOH B 33 833 102 HOH HOH . H 4 HOH B 34 834 52 HOH HOH . H 4 HOH B 35 835 115 HOH HOH . H 4 HOH B 36 836 119 HOH HOH . H 4 HOH B 37 837 3 HOH HOH . H 4 HOH B 38 838 51 HOH HOH . H 4 HOH B 39 839 8 HOH HOH . H 4 HOH B 40 840 126 HOH HOH . H 4 HOH B 41 841 13 HOH HOH . H 4 HOH B 42 842 55 HOH HOH . H 4 HOH B 43 843 104 HOH HOH . H 4 HOH B 44 844 57 HOH HOH . H 4 HOH B 45 845 97 HOH HOH . H 4 HOH B 46 846 25 HOH HOH . H 4 HOH B 47 847 41 HOH HOH . H 4 HOH B 48 848 43 HOH HOH . H 4 HOH B 49 849 21 HOH HOH . H 4 HOH B 50 850 27 HOH HOH . H 4 HOH B 51 851 168 HOH HOH . H 4 HOH B 52 852 20 HOH HOH . H 4 HOH B 53 853 90 HOH HOH . H 4 HOH B 54 854 40 HOH HOH . H 4 HOH B 55 855 65 HOH HOH . H 4 HOH B 56 856 203 HOH HOH . H 4 HOH B 57 857 69 HOH HOH . H 4 HOH B 58 858 112 HOH HOH . H 4 HOH B 59 859 135 HOH HOH . H 4 HOH B 60 860 62 HOH HOH . H 4 HOH B 61 861 19 HOH HOH . H 4 HOH B 62 862 288 HOH HOH . H 4 HOH B 63 863 94 HOH HOH . H 4 HOH B 64 864 107 HOH HOH . H 4 HOH B 65 865 197 HOH HOH . H 4 HOH B 66 866 176 HOH HOH . H 4 HOH B 67 867 252 HOH HOH . H 4 HOH B 68 868 134 HOH HOH . H 4 HOH B 69 869 89 HOH HOH . H 4 HOH B 70 870 297 HOH HOH . H 4 HOH B 71 871 33 HOH HOH . H 4 HOH B 72 872 70 HOH HOH . H 4 HOH B 73 873 99 HOH HOH . H 4 HOH B 74 874 222 HOH HOH . H 4 HOH B 75 875 186 HOH HOH . H 4 HOH B 76 876 34 HOH HOH . H 4 HOH B 77 877 172 HOH HOH . H 4 HOH B 78 878 143 HOH HOH . H 4 HOH B 79 879 30 HOH HOH . H 4 HOH B 80 880 250 HOH HOH . H 4 HOH B 81 881 61 HOH HOH . H 4 HOH B 82 882 263 HOH HOH . H 4 HOH B 83 883 116 HOH HOH . H 4 HOH B 84 884 192 HOH HOH . H 4 HOH B 85 885 256 HOH HOH . H 4 HOH B 86 886 202 HOH HOH . H 4 HOH B 87 887 298 HOH HOH . H 4 HOH B 88 888 241 HOH HOH . H 4 HOH B 89 889 169 HOH HOH . H 4 HOH B 90 890 231 HOH HOH . H 4 HOH B 91 891 198 HOH HOH . H 4 HOH B 92 892 146 HOH HOH . H 4 HOH B 93 893 49 HOH HOH . H 4 HOH B 94 894 48 HOH HOH . H 4 HOH B 95 895 67 HOH HOH . H 4 HOH B 96 896 236 HOH HOH . H 4 HOH B 97 897 221 HOH HOH . H 4 HOH B 98 898 60 HOH HOH . H 4 HOH B 99 899 141 HOH HOH . H 4 HOH B 100 900 237 HOH HOH . H 4 HOH B 101 901 259 HOH HOH . H 4 HOH B 102 902 165 HOH HOH . H 4 HOH B 103 903 160 HOH HOH . H 4 HOH B 104 904 210 HOH HOH . H 4 HOH B 105 905 193 HOH HOH . H 4 HOH B 106 906 54 HOH HOH . H 4 HOH B 107 907 190 HOH HOH . H 4 HOH B 108 908 178 HOH HOH . H 4 HOH B 109 909 85 HOH HOH . H 4 HOH B 110 910 255 HOH HOH . H 4 HOH B 111 911 122 HOH HOH . H 4 HOH B 112 912 71 HOH HOH . H 4 HOH B 113 913 106 HOH HOH . H 4 HOH B 114 914 184 HOH HOH . H 4 HOH B 115 915 239 HOH HOH . H 4 HOH B 116 916 226 HOH HOH . H 4 HOH B 117 917 105 HOH HOH . H 4 HOH B 118 918 86 HOH HOH . H 4 HOH B 119 919 235 HOH HOH . H 4 HOH B 120 920 273 HOH HOH . H 4 HOH B 121 921 166 HOH HOH . H 4 HOH B 122 922 177 HOH HOH . H 4 HOH B 123 923 150 HOH HOH . H 4 HOH B 124 924 196 HOH HOH . H 4 HOH B 125 925 138 HOH HOH . H 4 HOH B 126 926 183 HOH HOH . H 4 HOH B 127 927 253 HOH HOH . H 4 HOH B 128 928 301 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . E 3 64.367 -14.935 94.557 1 69.7 ? N1 IMD 803 A 1 HETATM 2 C C2 IMD . . . E 3 64.038 -13.649 94.3 1 69.59 ? C2 IMD 803 A 1 HETATM 3 N N3 IMD . . . E 3 64.579 -12.867 95.257 1 69.27 ? N3 IMD 803 A 1 HETATM 4 C C4 IMD . . . E 3 65.251 -13.659 96.12 1 69.59 ? C4 IMD 803 A 1 HETATM 5 C C5 IMD . . . E 3 65.121 -14.966 95.679 1 69.25 ? C5 IMD 803 A 1 HETATM 6 H HN1 IMD . . . E 3 64.104 -15.712 94.021 1 83.71 ? HN1 IMD 803 A 1 HETATM 7 H H2 IMD . . . E 3 63.497 -13.338 93.545 1 83.58 ? H2 IMD 803 A 1 HETATM 8 H HN3 IMD . . . E 3 64.498 -11.892 95.315 1 83.2 ? HN3 IMD 803 A 1 HETATM 9 H H4 IMD . . . E 3 65.743 -13.363 96.914 1 83.58 ? H4 IMD 803 A 1 HETATM 10 H H5 IMD . . . E 3 65.503 -15.763 96.101 1 83.17 ? H5 IMD 803 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #