data_6ZPL
#
_model_server_result.job_id            srLIwrYkWv6U6bJGBxnjrA 
_model_server_result.datetime_utc      '2024-10-19 16:46:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zpl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":701}' 
#
_entry.id    6ZPL 
#
_exptl.entry_id    6ZPL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              567.498 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.86 
_cell.angle_gamma         90 
_cell.entry_id            6ZPL 
_cell.length_a            116.41 
_cell.length_b            69.71 
_cell.length_c            149.43 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZPL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 22 E CYS 22 1_555 D SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? 
disulf ? disulf2 E SG CYS 22 F CYS 22 1_555 E SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc1 A O GLY 24 B GLY 115 1_555 G NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? 
metalc ? metalc2 A O VAL 27 B VAL 118 1_555 G NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.024 ? 
metalc ? metalc3 B O GLY 24 A GLY 115 1_555 J NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? 
metalc ? metalc4 B O VAL 27 A VAL 118 1_555 J NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
#
_chem_comp.formula           'C24 H23 F6 N O6 S' 
_chem_comp.formula_weight    567.498 
_chem_comp.id                QET 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O02 S01 QET doub 275 n n 
O01 S01 QET doub 276 n n 
S01 C01 QET sing 277 n n 
S01 C02 QET sing 278 n n 
C02 C03 QET doub 279 n y 
C02 C19 QET sing 280 n y 
C03 C04 QET sing 281 n y 
C19 C09 QET doub 282 n y 
C04 C05 QET doub 283 n y 
C09 C05 QET sing 284 n y 
C09 C10 QET sing 285 n n 
C05 O03 QET sing 286 n n 
O04 C10 QET doub 287 n n 
C10 N01 QET sing 288 n n 
O03 C06 QET sing 289 n n 
C06 C07 QET sing 290 n n 
N01 C11 QET sing 291 n n 
N01 C18 QET sing 292 n n 
F04 C08 QET sing 293 n n 
C11 C12 QET sing 294 n n 
F05 C08 QET sing 295 n n 
C08 C07 QET sing 296 n n 
C08 F03 QET sing 297 n n 
C18 C17 QET sing 298 n n 
C07 F02 QET sing 299 n n 
C07 F01 QET sing 300 n n 
C12 C17 QET doub 301 n y 
C12 C13 QET sing 302 n y 
C17 C16 QET sing 303 n y 
C13 C14 QET doub 304 n y 
C16 C15 QET doub 305 n y 
C14 C15 QET sing 306 n y 
C14 F06 QET sing 307 n n 
C15 O05 QET sing 308 n n 
O05 C22 QET sing 309 n n 
C22 C23 QET sing 310 n n 
C22 C21 QET sing 311 n n 
C23 C24 QET sing 312 n n 
C21 C20 QET sing 313 n n 
C24 O06 QET sing 314 n n 
C20 O06 QET sing 315 n n 
C13 H03 QET sing 316 n n 
C20 H19 QET sing 317 n n 
C20 H11 QET sing 318 n n 
C21 H20 QET sing 319 n n 
C21 H12 QET sing 320 n n 
C22 H06 QET sing 321 n n 
C24 H14 QET sing 322 n n 
C24 H22 QET sing 323 n n 
C01 H23 QET sing 324 n n 
C01 H07 QET sing 325 n n 
C01 H15 QET sing 326 n n 
C03 H01 QET sing 327 n n 
C04 H02 QET sing 328 n n 
C06 H16 QET sing 329 n n 
C06 H08 QET sing 330 n n 
C11 H09 QET sing 331 n n 
C11 H17 QET sing 332 n n 
C16 H04 QET sing 333 n n 
C18 H10 QET sing 334 n n 
C18 H18 QET sing 335 n n 
C19 H05 QET sing 336 n n 
C23 H21 QET sing 337 n n 
C23 H13 QET sing 338 n n 
#
_atom_sites.entry_id                     6ZPL 
_atom_sites.fract_transf_matrix[1][1]    0.00859 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000429 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014345 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0067 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 4 QET B 1 701 701 QET LIG . 
G 5 NA B 1 702 1 NA NA . 
H 6 CL B 1 703 1 CL CL . 
I 4 QET A 1 701 701 QET LIG . 
J 5 NA A 1 702 3 NA NA . 
K 6 CL A 1 703 2 CL CL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QET . . . F 4 126.35 0.606 36.304 1 90.16 ? C10 QET 701 B 1 
HETATM 2 C C13 QET . . . F 4 122.438 -0.181 33.097 1 95.2 ? C13 QET 701 B 1 
HETATM 3 C C15 QET . . . F 4 123.283 -1.56 31.305 1 97.06 ? C15 QET 701 B 1 
HETATM 4 C C17 QET . . . F 4 124.811 -0.638 32.935 1 94.04 ? C17 QET 701 B 1 
HETATM 5 C C20 QET . . . F 4 121.495 -2.737 27.093 1 104.98 ? C20 QET 701 B 1 
HETATM 6 C C21 QET . . . F 4 121.594 -2.007 28.43 1 102.46 ? C21 QET 701 B 1 
HETATM 7 C C22 QET . . . F 4 122.976 -1.906 28.931 1 100.61 ? C22 QET 701 B 1 
HETATM 8 C C24 QET . . . F 4 123.549 -3.985 27.584 1 103.32 ? C24 QET 701 B 1 
HETATM 9 C C01 QET . . . F 4 123.265 -1.035 40.971 1 88.86 ? C01 QET 701 B 1 
HETATM 10 N N01 QET . . . F 4 125.616 0.355 34.972 1 91.54 ? N01 QET 701 B 1 
HETATM 11 O O01 QET . . . F 4 125.488 0.18 42.039 1 87.37 ? O01 QET 701 B 1 
HETATM 12 S S01 QET . . . F 4 124.256 0.487 41.306 1 88.13 ? S01 QET 701 B 1 
HETATM 13 C C02 QET . . . F 4 124.608 1.365 39.693 1 88.73 ? C02 QET 701 B 1 
HETATM 14 O O02 QET . . . F 4 123.582 1.35 42.269 1 88.22 ? O02 QET 701 B 1 
HETATM 15 C C03 QET . . . F 4 124.139 2.663 39.486 1 89.28 ? C03 QET 701 B 1 
HETATM 16 O O03 QET . . . F 4 125.411 3.234 35.994 1 91.07 ? O03 QET 701 B 1 
HETATM 17 C C04 QET . . . F 4 124.383 3.311 38.272 1 89.98 ? C04 QET 701 B 1 
HETATM 18 O O04 QET . . . F 4 127.469 0.248 36.461 1 89.72 ? O04 QET 701 B 1 
HETATM 19 C C05 QET . . . F 4 125.113 2.648 37.244 1 90.15 ? C05 QET 701 B 1 
HETATM 20 O O05 QET . . . F 4 122.99 -2.487 30.234 1 99 ? O05 QET 701 B 1 
HETATM 21 C C06 QET . . . F 4 125.01 4.56 35.68 1 91.88 ? C06 QET 701 B 1 
HETATM 22 O O06 QET . . . F 4 122.13 -4.039 27.145 1 105.16 ? O06 QET 701 B 1 
HETATM 23 C C07 QET . . . F 4 125.393 4.834 34.223 1 93.05 ? C07 QET 701 B 1 
HETATM 24 C C08 QET . . . F 4 126.912 5.012 34.064 1 92.75 ? C08 QET 701 B 1 
HETATM 25 C C09 QET . . . F 4 125.582 1.35 37.453 1 89.64 ? C09 QET 701 B 1 
HETATM 26 C C11 QET . . . F 4 124.257 0.779 34.749 1 92.35 ? C11 QET 701 B 1 
HETATM 27 C C12 QET . . . F 4 123.742 -0.016 33.54 1 93.88 ? C12 QET 701 B 1 
HETATM 28 C C14 QET . . . F 4 122.206 -0.952 31.971 1 96.81 ? C14 QET 701 B 1 
HETATM 29 C C16 QET . . . F 4 124.579 -1.403 31.766 1 95.69 ? C16 QET 701 B 1 
HETATM 30 C C18 QET . . . F 4 126.091 -0.28 33.742 1 92.58 ? C18 QET 701 B 1 
HETATM 31 C C19 QET . . . F 4 125.309 0.696 38.667 1 88.95 ? C19 QET 701 B 1 
HETATM 32 C C23 QET . . . F 4 123.992 -2.649 28.165 1 101.38 ? C23 QET 701 B 1 
HETATM 33 F F01 QET . . . F 4 124.737 5.952 33.808 1 94.18 ? F01 QET 701 B 1 
HETATM 34 F F02 QET . . . F 4 124.962 3.798 33.465 1 93.62 ? F02 QET 701 B 1 
HETATM 35 F F03 QET . . . F 4 127.599 4.279 34.969 1 91.52 ? F03 QET 701 B 1 
HETATM 36 F F04 QET . . . F 4 127.257 6.32 34.242 1 93.15 ? F04 QET 701 B 1 
HETATM 37 F F05 QET . . . F 4 127.311 4.62 32.81 1 93.7 ? F05 QET 701 B 1 
HETATM 38 F F06 QET . . . F 4 120.94 -1.11 31.52 1 98.38 ? F06 QET 701 B 1 
HETATM 39 H H03 QET . . . F 4 121.741 0.263 33.52 1 104.43 ? H03 QET 701 B 1 
HETATM 40 H H19 QET . . . F 4 120.586 -2.851 26.888 1 127.1 ? H19 QET 701 B 1 
HETATM 41 H H11 QET . . . F 4 121.896 -2.215 26.426 1 126.46 ? H11 QET 701 B 1 
HETATM 42 H H20 QET . . . F 4 121.24 -1.143 28.331 1 120.48 ? H20 QET 701 B 1 
HETATM 43 H H12 QET . . . F 4 121.077 -2.476 29.057 1 120.08 ? H12 QET 701 B 1 
HETATM 44 H H06 QET . . . F 4 123.222 -1 28.976 1 115.8 ? H06 QET 701 B 1 
HETATM 45 H H14 QET . . . F 4 123.676 -4.646 28.238 1 121.65 ? H14 QET 701 B 1 
HETATM 46 H H22 QET . . . F 4 124.098 -4.188 26.85 1 123.3 ? H22 QET 701 B 1 
HETATM 47 H H23 QET . . . F 4 122.558 -0.821 40.392 1 91.15 ? H23 QET 701 B 1 
HETATM 48 H H07 QET . . . F 4 122.917 -1.372 41.776 1 90.42 ? H07 QET 701 B 1 
HETATM 49 H H15 QET . . . F 4 123.811 -1.685 40.57 1 90.49 ? H15 QET 701 B 1 
HETATM 50 H H01 QET . . . F 4 123.667 3.1 40.156 1 91.42 ? H01 QET 701 B 1 
HETATM 51 H H02 QET . . . F 4 124.075 4.178 38.159 1 93.42 ? H02 QET 701 B 1 
HETATM 52 H H16 QET . . . F 4 124.079 4.64 35.774 1 97.49 ? H16 QET 701 B 1 
HETATM 53 H H08 QET . . . F 4 125.443 5.168 36.248 1 96.77 ? H08 QET 701 B 1 
HETATM 54 H H09 QET . . . F 4 123.735 0.561 35.497 1 97.8 ? H09 QET 701 B 1 
HETATM 55 H H17 QET . . . F 4 124.251 1.696 34.549 1 98.38 ? H17 QET 701 B 1 
HETATM 56 H H04 QET . . . F 4 125.273 -1.883 31.375 1 105.81 ? H04 QET 701 B 1 
HETATM 57 H H10 QET . . . F 4 126.626 0.319 33.254 1 98.94 ? H10 QET 701 B 1 
HETATM 58 H H18 QET . . . F 4 126.574 -1.06 33.943 1 98.45 ? H18 QET 701 B 1 
HETATM 59 H H05 QET . . . F 4 125.615 -0.169 38.803 1 90.5 ? H05 QET 701 B 1 
HETATM 60 H H21 QET . . . F 4 124.714 -2.819 28.743 1 116.88 ? H21 QET 701 B 1 
HETATM 61 H H13 QET . . . F 4 124.294 -2.102 27.465 1 118.74 ? H13 QET 701 B 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    44 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           61 
#