data_6ZPL # _model_server_result.job_id Ro8Lz674abg8PnL37VEAXw _model_server_result.datetime_utc '2025-01-04 16:26:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zpl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":701}' # _entry.id 6ZPL # _exptl.entry_id 6ZPL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 567.498 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.86 _cell.angle_gamma 90 _cell.entry_id 6ZPL _cell.length_a 116.41 _cell.length_b 69.71 _cell.length_c 149.43 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZPL _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 22 E CYS 22 1_555 D SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? disulf ? disulf2 E SG CYS 22 F CYS 22 1_555 E SG CYS 96 F CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc1 A O GLY 24 B GLY 115 1_555 G NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc2 A O VAL 27 B VAL 118 1_555 G NA NA . B NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.024 ? metalc ? metalc3 B O GLY 24 A GLY 115 1_555 J NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.082 ? metalc ? metalc4 B O VAL 27 A VAL 118 1_555 J NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? # _chem_comp.formula 'C24 H23 F6 N O6 S' _chem_comp.formula_weight 567.498 _chem_comp.id QET _chem_comp.mon_nstd_flag . _chem_comp.name '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O02 S01 QET doub 275 n n O01 S01 QET doub 276 n n S01 C01 QET sing 277 n n S01 C02 QET sing 278 n n C02 C03 QET doub 279 n y C02 C19 QET sing 280 n y C03 C04 QET sing 281 n y C19 C09 QET doub 282 n y C04 C05 QET doub 283 n y C09 C05 QET sing 284 n y C09 C10 QET sing 285 n n C05 O03 QET sing 286 n n O04 C10 QET doub 287 n n C10 N01 QET sing 288 n n O03 C06 QET sing 289 n n C06 C07 QET sing 290 n n N01 C11 QET sing 291 n n N01 C18 QET sing 292 n n F04 C08 QET sing 293 n n C11 C12 QET sing 294 n n F05 C08 QET sing 295 n n C08 C07 QET sing 296 n n C08 F03 QET sing 297 n n C18 C17 QET sing 298 n n C07 F02 QET sing 299 n n C07 F01 QET sing 300 n n C12 C17 QET doub 301 n y C12 C13 QET sing 302 n y C17 C16 QET sing 303 n y C13 C14 QET doub 304 n y C16 C15 QET doub 305 n y C14 C15 QET sing 306 n y C14 F06 QET sing 307 n n C15 O05 QET sing 308 n n O05 C22 QET sing 309 n n C22 C23 QET sing 310 n n C22 C21 QET sing 311 n n C23 C24 QET sing 312 n n C21 C20 QET sing 313 n n C24 O06 QET sing 314 n n C20 O06 QET sing 315 n n C13 H03 QET sing 316 n n C20 H19 QET sing 317 n n C20 H11 QET sing 318 n n C21 H20 QET sing 319 n n C21 H12 QET sing 320 n n C22 H06 QET sing 321 n n C24 H14 QET sing 322 n n C24 H22 QET sing 323 n n C01 H23 QET sing 324 n n C01 H07 QET sing 325 n n C01 H15 QET sing 326 n n C03 H01 QET sing 327 n n C04 H02 QET sing 328 n n C06 H16 QET sing 329 n n C06 H08 QET sing 330 n n C11 H09 QET sing 331 n n C11 H17 QET sing 332 n n C16 H04 QET sing 333 n n C18 H10 QET sing 334 n n C18 H18 QET sing 335 n n C19 H05 QET sing 336 n n C23 H21 QET sing 337 n n C23 H13 QET sing 338 n n # _atom_sites.entry_id 6ZPL _atom_sites.fract_transf_matrix[1][1] 0.00859 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000429 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014345 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0067 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 QET B 1 701 701 QET LIG . G 5 NA B 1 702 1 NA NA . H 6 CL B 1 703 1 CL CL . I 4 QET A 1 701 701 QET LIG . J 5 NA A 1 702 3 NA NA . K 6 CL A 1 703 2 CL CL . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QET . . . I 4 68.781 0.864 36.312 1 98.66 ? C10 QET 701 A 1 HETATM 2 C C13 QET . . . I 4 65.548 0.387 32.249 1 102.82 ? C13 QET 701 A 1 HETATM 3 C C15 QET . . . I 4 66.96 -0.289 30.388 1 103.61 ? C15 QET 701 A 1 HETATM 4 C C17 QET . . . I 4 67.877 -0.091 32.638 1 101.28 ? C17 QET 701 A 1 HETATM 5 C C20 QET . . . I 4 67.785 -1.632 26.131 1 108.19 ? C20 QET 701 A 1 HETATM 6 C C21 QET . . . I 4 67.442 -2.311 27.475 1 106.88 ? C21 QET 701 A 1 HETATM 7 C C22 QET . . . I 4 66.488 -1.591 28.346 1 106.14 ? C22 QET 701 A 1 HETATM 8 C C24 QET . . . I 4 65.38 -1.178 26.1 1 109.29 ? C24 QET 701 A 1 HETATM 9 C C01 QET . . . I 4 64.909 -1.145 39.384 1 99.87 ? C01 QET 701 A 1 HETATM 10 N N01 QET . . . I 4 68.151 0.422 34.978 1 99.61 ? N01 QET 701 A 1 HETATM 11 O O01 QET . . . I 4 66.402 -0.467 41.58 1 98.5 ? O01 QET 701 A 1 HETATM 12 S S01 QET . . . I 4 65.551 0.12 40.536 1 99.21 ? S01 QET 701 A 1 HETATM 13 C C02 QET . . . I 4 66.452 1.266 39.384 1 98.91 ? C02 QET 701 A 1 HETATM 14 O O02 QET . . . I 4 64.476 0.752 41.29 1 100.05 ? O02 QET 701 A 1 HETATM 15 C C03 QET . . . I 4 66.253 2.644 39.443 1 99.31 ? C03 QET 701 A 1 HETATM 16 O O03 QET . . . I 4 68.385 3.732 36.591 1 99.31 ? O03 QET 701 A 1 HETATM 17 C C04 QET . . . I 4 66.875 3.454 38.497 1 99.36 ? C04 QET 701 A 1 HETATM 18 O O04 QET . . . I 4 69.948 0.724 36.484 1 98.15 ? O04 QET 701 A 1 HETATM 19 C C05 QET . . . I 4 67.669 2.885 37.463 1 99.07 ? C05 QET 701 A 1 HETATM 20 O O05 QET . . . I 4 67.179 -0.482 28.955 1 104.93 ? O05 QET 701 A 1 HETATM 21 C C06 QET . . . I 4 67.797 4.113 35.349 1 100.26 ? C06 QET 701 A 1 HETATM 22 O O06 QET . . . I 4 66.717 -0.839 25.554 1 109.22 ? O06 QET 701 A 1 HETATM 23 C C07 QET . . . I 4 68.92 4.143 34.303 1 100.37 ? C07 QET 701 A 1 HETATM 24 C C08 QET . . . I 4 68.732 5.279 33.316 1 101.45 ? C08 QET 701 A 1 HETATM 25 C C09 QET . . . I 4 67.884 1.503 37.427 1 98.69 ? C09 QET 701 A 1 HETATM 26 C C11 QET . . . I 4 66.745 0.514 34.644 1 100.51 ? C11 QET 701 A 1 HETATM 27 C C12 QET . . . I 4 66.641 0.287 33.113 1 101.55 ? C12 QET 701 A 1 HETATM 28 C C14 QET . . . I 4 65.709 0.141 30.885 1 103.83 ? C14 QET 701 A 1 HETATM 29 C C16 QET . . . I 4 68.038 -0.371 31.256 1 102.35 ? C16 QET 701 A 1 HETATM 30 C C18 QET . . . I 4 68.861 -0.147 33.839 1 100.02 ? C18 QET 701 A 1 HETATM 31 C C19 QET . . . I 4 67.226 0.684 38.357 1 98.64 ? C19 QET 701 A 1 HETATM 32 C C23 QET . . . I 4 65.308 -1.081 27.621 1 107.51 ? C23 QET 701 A 1 HETATM 33 F F01 QET . . . I 4 68.899 2.981 33.6 1 100.5 ? F01 QET 701 A 1 HETATM 34 F F02 QET . . . I 4 70.136 4.304 34.881 1 99.73 ? F02 QET 701 A 1 HETATM 35 F F03 QET . . . I 4 69.674 5.195 32.351 1 101.77 ? F03 QET 701 A 1 HETATM 36 F F04 QET . . . I 4 67.478 5.203 32.793 1 102.28 ? F04 QET 701 A 1 HETATM 37 F F05 QET . . . I 4 68.908 6.476 33.926 1 101.52 ? F05 QET 701 A 1 HETATM 38 F F06 QET . . . I 4 64.638 0.275 30.063 1 105.25 ? F06 QET 701 A 1 HETATM 39 H H03 QET . . . I 4 64.724 0.658 32.579 1 106.56 ? H03 QET 701 A 1 HETATM 40 H H19 QET . . . I 4 68.521 -1.065 26.27 1 117.49 ? H19 QET 701 A 1 HETATM 41 H H11 QET . . . I 4 68.031 -2.291 25.507 1 118.99 ? H11 QET 701 A 1 HETATM 42 H H20 QET . . . I 4 67.085 -3.16 27.292 1 115.85 ? H20 QET 701 A 1 HETATM 43 H H12 QET . . . I 4 68.241 -2.426 27.956 1 114.33 ? H12 QET 701 A 1 HETATM 44 H H06 QET . . . I 4 66.2 -2.177 29.025 1 113.14 ? H06 QET 701 A 1 HETATM 45 H H14 QET . . . I 4 64.763 -0.568 25.738 1 121.22 ? H14 QET 701 A 1 HETATM 46 H H22 QET . . . I 4 65.145 -2.046 25.824 1 121.24 ? H22 QET 701 A 1 HETATM 47 H H23 QET . . . I 4 64.475 -0.738 38.66 1 100.21 ? H23 QET 701 A 1 HETATM 48 H H07 QET . . . I 4 65.633 -1.65 39.056 1 99.29 ? H07 QET 701 A 1 HETATM 49 H H15 QET . . . I 4 64.316 -1.723 39.826 1 100.14 ? H15 QET 701 A 1 HETATM 50 H H01 QET . . . I 4 65.701 3.018 40.093 1 98.87 ? H01 QET 701 A 1 HETATM 51 H H02 QET . . . I 4 66.777 4.379 38.55 1 98.99 ? H02 QET 701 A 1 HETATM 52 H H16 QET . . . I 4 67.128 3.514 35.097 1 100.86 ? H16 QET 701 A 1 HETATM 53 H H08 QET . . . I 4 67.42 4.971 35.444 1 101.05 ? H08 QET 701 A 1 HETATM 54 H H09 QET . . . I 4 66.28 -0.17 35.087 1 101.17 ? H09 QET 701 A 1 HETATM 55 H H17 QET . . . I 4 66.419 1.364 34.858 1 101.27 ? H17 QET 701 A 1 HETATM 56 H H04 QET . . . I 4 68.873 -0.62 30.932 1 105.21 ? H04 QET 701 A 1 HETATM 57 H H10 QET . . . I 4 69.629 0.362 33.654 1 99.93 ? H10 QET 701 A 1 HETATM 58 H H18 QET . . . I 4 69.098 -1.038 34.019 1 99.93 ? H18 QET 701 A 1 HETATM 59 H H05 QET . . . I 4 67.336 -0.239 38.32 1 96.9 ? H05 QET 701 A 1 HETATM 60 H H21 QET . . . I 4 64.557 -1.57 27.907 1 116.86 ? H21 QET 701 A 1 HETATM 61 H H13 QET . . . I 4 65.183 -0.18 27.859 1 116.24 ? H13 QET 701 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 61 #