data_6ZR6 # _model_server_result.job_id ty9W52KtiGQh-ylAQGULAg _model_server_result.datetime_utc '2024-11-15 00:21:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zr6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6ZR6 # _exptl.entry_id 6ZR6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.291 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[6-(3,4-dihydroxyphenyl)pyridin-2-yl](4-fluoro-3-hydroxyphenyl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZR6 _cell.length_a 91.102 _cell.length_b 91.102 _cell.length_c 132.098 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZR6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall 'I 4 2' _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 91.102 0 3 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 6_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 91.102 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 255 A CYS 255 1_555 A SG CYS 255 A CYS 255 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc1 A O GLU 50 A GLU 50 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc2 A O LEU 53 A LEU 53 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc3 A O ALA 56 A ALA 56 1_555 D NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc4 D NA NA . A NA 303 1_555 F O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc5 D NA NA . A NA 303 1_555 F O HOH . A HOH 532 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.349 ? metalc ? metalc6 D NA NA . A NA 303 1_555 F O HOH . A HOH 532 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'C18 H12 F N O4' _chem_comp.formula_weight 325.291 _chem_comp.id F45 _chem_comp.mon_nstd_flag . _chem_comp.name '[6-(3,4-dihydroxyphenyl)pyridin-2-yl](4-fluoro-3-hydroxyphenyl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C9 F45 doub 107 n n O3 C17 F45 sing 108 n n C17 C16 F45 doub 109 n y C17 C F45 sing 110 n y C16 C3 F45 sing 111 n y C9 C8 F45 sing 112 n n C9 C10 F45 sing 113 n n C7 C8 F45 doub 114 n y C7 C6 F45 sing 115 n y C8 N F45 sing 116 n y C6 C5 F45 doub 117 n y N C4 F45 doub 118 n y C5 C4 F45 sing 119 n y O C F45 sing 120 n n C4 C3 F45 sing 121 n n C C1 F45 doub 122 n y C3 C2 F45 doub 123 n y C15 C10 F45 doub 124 n y C15 C14 F45 sing 125 n y C1 C2 F45 sing 126 n y C10 C11 F45 sing 127 n y O2 C14 F45 sing 128 n n C14 C13 F45 doub 129 n y C11 C12 F45 doub 130 n y C13 C12 F45 sing 131 n y C13 F F45 sing 132 n n C12 H1 F45 sing 133 n n C11 H2 F45 sing 134 n n O2 H3 F45 sing 135 n n C15 H4 F45 sing 136 n n C7 H5 F45 sing 137 n n C6 H6 F45 sing 138 n n C5 H7 F45 sing 139 n n C2 H8 F45 sing 140 n n C1 H9 F45 sing 141 n n C16 H10 F45 sing 142 n n O3 H11 F45 sing 143 n n O H12 F45 sing 144 n n # _atom_sites.entry_id 6ZR6 _atom_sites.fract_transf_matrix[1][1] 0.010977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00757 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BGC A 1 301 3 BGC BGC . C 3 NAD A 1 302 1 NAD NAD . D 4 NA A 1 303 1 NA NA . E 5 F45 A 1 304 1 F45 F45 . F 6 HOH A 1 401 71 HOH HOH . F 6 HOH A 2 402 180 HOH HOH . F 6 HOH A 3 403 175 HOH HOH . F 6 HOH A 4 404 76 HOH HOH . F 6 HOH A 5 405 164 HOH HOH . F 6 HOH A 6 406 135 HOH HOH . F 6 HOH A 7 407 72 HOH HOH . F 6 HOH A 8 408 88 HOH HOH . F 6 HOH A 9 409 92 HOH HOH . F 6 HOH A 10 410 165 HOH HOH . F 6 HOH A 11 411 105 HOH HOH . F 6 HOH A 12 412 42 HOH HOH . F 6 HOH A 13 413 133 HOH HOH . F 6 HOH A 14 414 146 HOH HOH . F 6 HOH A 15 415 3 HOH HOH . F 6 HOH A 16 416 44 HOH HOH . F 6 HOH A 17 417 178 HOH HOH . F 6 HOH A 18 418 144 HOH HOH . F 6 HOH A 19 419 97 HOH HOH . F 6 HOH A 20 420 45 HOH HOH . F 6 HOH A 21 421 54 HOH HOH . F 6 HOH A 22 422 115 HOH HOH . F 6 HOH A 23 423 7 HOH HOH . F 6 HOH A 24 424 5 HOH HOH . F 6 HOH A 25 425 152 HOH HOH . F 6 HOH A 26 426 121 HOH HOH . F 6 HOH A 27 427 21 HOH HOH . F 6 HOH A 28 428 93 HOH HOH . F 6 HOH A 29 429 29 HOH HOH . F 6 HOH A 30 430 8 HOH HOH . F 6 HOH A 31 431 6 HOH HOH . F 6 HOH A 32 432 40 HOH HOH . F 6 HOH A 33 433 56 HOH HOH . F 6 HOH A 34 434 78 HOH HOH . F 6 HOH A 35 435 111 HOH HOH . F 6 HOH A 36 436 58 HOH HOH . F 6 HOH A 37 437 142 HOH HOH . F 6 HOH A 38 438 64 HOH HOH . F 6 HOH A 39 439 75 HOH HOH . F 6 HOH A 40 440 147 HOH HOH . F 6 HOH A 41 441 63 HOH HOH . F 6 HOH A 42 442 55 HOH HOH . F 6 HOH A 43 443 57 HOH HOH . F 6 HOH A 44 444 145 HOH HOH . F 6 HOH A 45 445 18 HOH HOH . F 6 HOH A 46 446 32 HOH HOH . F 6 HOH A 47 447 85 HOH HOH . F 6 HOH A 48 448 94 HOH HOH . F 6 HOH A 49 449 103 HOH HOH . F 6 HOH A 50 450 87 HOH HOH . F 6 HOH A 51 451 95 HOH HOH . F 6 HOH A 52 452 173 HOH HOH . F 6 HOH A 53 453 140 HOH HOH . F 6 HOH A 54 454 139 HOH HOH . F 6 HOH A 55 455 80 HOH HOH . F 6 HOH A 56 456 19 HOH HOH . F 6 HOH A 57 457 65 HOH HOH . F 6 HOH A 58 458 167 HOH HOH . F 6 HOH A 59 459 104 HOH HOH . F 6 HOH A 60 460 38 HOH HOH . F 6 HOH A 61 461 10 HOH HOH . F 6 HOH A 62 462 107 HOH HOH . F 6 HOH A 63 463 37 HOH HOH . F 6 HOH A 64 464 53 HOH HOH . F 6 HOH A 65 465 20 HOH HOH . F 6 HOH A 66 466 182 HOH HOH . F 6 HOH A 67 467 118 HOH HOH . F 6 HOH A 68 468 73 HOH HOH . F 6 HOH A 69 469 169 HOH HOH . F 6 HOH A 70 470 100 HOH HOH . F 6 HOH A 71 471 17 HOH HOH . F 6 HOH A 72 472 15 HOH HOH . F 6 HOH A 73 473 125 HOH HOH . F 6 HOH A 74 474 91 HOH HOH . F 6 HOH A 75 475 66 HOH HOH . F 6 HOH A 76 476 84 HOH HOH . F 6 HOH A 77 477 4 HOH HOH . F 6 HOH A 78 478 181 HOH HOH . F 6 HOH A 79 479 161 HOH HOH . F 6 HOH A 80 480 25 HOH HOH . F 6 HOH A 81 481 14 HOH HOH . F 6 HOH A 82 482 101 HOH HOH . F 6 HOH A 83 483 141 HOH HOH . F 6 HOH A 84 484 33 HOH HOH . F 6 HOH A 85 485 166 HOH HOH . F 6 HOH A 86 486 98 HOH HOH . F 6 HOH A 87 487 51 HOH HOH . F 6 HOH A 88 488 9 HOH HOH . F 6 HOH A 89 489 108 HOH HOH . F 6 HOH A 90 490 172 HOH HOH . F 6 HOH A 91 491 62 HOH HOH . F 6 HOH A 92 492 43 HOH HOH . F 6 HOH A 93 493 11 HOH HOH . F 6 HOH A 94 494 22 HOH HOH . F 6 HOH A 95 495 59 HOH HOH . F 6 HOH A 96 496 184 HOH HOH . F 6 HOH A 97 497 128 HOH HOH . F 6 HOH A 98 498 34 HOH HOH . F 6 HOH A 99 499 74 HOH HOH . F 6 HOH A 100 500 47 HOH HOH . F 6 HOH A 101 501 50 HOH HOH . F 6 HOH A 102 502 48 HOH HOH . F 6 HOH A 103 503 28 HOH HOH . F 6 HOH A 104 504 159 HOH HOH . F 6 HOH A 105 505 177 HOH HOH . F 6 HOH A 106 506 117 HOH HOH . F 6 HOH A 107 507 148 HOH HOH . F 6 HOH A 108 508 26 HOH HOH . F 6 HOH A 109 509 134 HOH HOH . F 6 HOH A 110 510 86 HOH HOH . F 6 HOH A 111 511 23 HOH HOH . F 6 HOH A 112 512 122 HOH HOH . F 6 HOH A 113 513 160 HOH HOH . F 6 HOH A 114 514 83 HOH HOH . F 6 HOH A 115 515 110 HOH HOH . F 6 HOH A 116 516 120 HOH HOH . F 6 HOH A 117 517 46 HOH HOH . F 6 HOH A 118 518 13 HOH HOH . F 6 HOH A 119 519 170 HOH HOH . F 6 HOH A 120 520 124 HOH HOH . F 6 HOH A 121 521 81 HOH HOH . F 6 HOH A 122 522 39 HOH HOH . F 6 HOH A 123 523 67 HOH HOH . F 6 HOH A 124 524 158 HOH HOH . F 6 HOH A 125 525 183 HOH HOH . F 6 HOH A 126 526 89 HOH HOH . F 6 HOH A 127 527 70 HOH HOH . F 6 HOH A 128 528 35 HOH HOH . F 6 HOH A 129 529 49 HOH HOH . F 6 HOH A 130 530 82 HOH HOH . F 6 HOH A 131 531 174 HOH HOH . F 6 HOH A 132 532 143 HOH HOH . F 6 HOH A 133 533 52 HOH HOH . F 6 HOH A 134 534 127 HOH HOH . F 6 HOH A 135 535 109 HOH HOH . F 6 HOH A 136 536 185 HOH HOH . F 6 HOH A 137 537 24 HOH HOH . F 6 HOH A 138 538 99 HOH HOH . F 6 HOH A 139 539 150 HOH HOH . F 6 HOH A 140 540 179 HOH HOH . F 6 HOH A 141 541 163 HOH HOH . F 6 HOH A 142 542 41 HOH HOH . F 6 HOH A 143 543 151 HOH HOH . F 6 HOH A 144 544 68 HOH HOH . F 6 HOH A 145 545 176 HOH HOH . F 6 HOH A 146 546 96 HOH HOH . F 6 HOH A 147 547 119 HOH HOH . F 6 HOH A 148 548 123 HOH HOH . F 6 HOH A 149 549 131 HOH HOH . F 6 HOH A 150 550 90 HOH HOH . F 6 HOH A 151 551 154 HOH HOH . F 6 HOH A 152 552 156 HOH HOH . F 6 HOH A 153 553 136 HOH HOH . F 6 HOH A 154 554 162 HOH HOH . F 6 HOH A 155 555 157 HOH HOH . F 6 HOH A 156 556 132 HOH HOH . F 6 HOH A 157 557 155 HOH HOH . F 6 HOH A 158 558 60 HOH HOH . F 6 HOH A 159 559 79 HOH HOH . F 6 HOH A 160 560 137 HOH HOH . F 6 HOH A 161 561 116 HOH HOH . F 6 HOH A 162 562 149 HOH HOH . F 6 HOH A 163 563 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F F45 . . . E 5 -7.212 34.011 -9.652 1 19.05 ? F F45 304 A 1 HETATM 2 C C13 F45 . . . E 5 -7.434 33.154 -10.671 1 16.38 ? C13 F45 304 A 1 HETATM 3 C C12 F45 . . . E 5 -7.464 31.806 -10.425 1 18.34 ? C12 F45 304 A 1 HETATM 4 C C11 F45 . . . E 5 -7.746 30.952 -11.471 1 19.24 ? C11 F45 304 A 1 HETATM 5 C C14 F45 . . . E 5 -7.66 33.69 -11.928 1 18.21 ? C14 F45 304 A 1 HETATM 6 O O2 F45 . . . E 5 -7.614 35.029 -12.162 1 18.36 ? O2 F45 304 A 1 HETATM 7 C C15 F45 . . . E 5 -7.947 32.822 -12.972 1 16.99 ? C15 F45 304 A 1 HETATM 8 C C10 F45 . . . E 5 -7.991 31.449 -12.746 1 18.91 ? C10 F45 304 A 1 HETATM 9 C C9 F45 . . . E 5 -8.316 30.524 -13.866 1 19.06 ? C9 F45 304 A 1 HETATM 10 O O1 F45 . . . E 5 -8.919 30.936 -14.853 1 22.89 ? O1 F45 304 A 1 HETATM 11 C C8 F45 . . . E 5 -7.898 29.084 -13.775 1 20.9 ? C8 F45 304 A 1 HETATM 12 C C7 F45 . . . E 5 -8.83 28.063 -13.894 1 22.91 ? C7 F45 304 A 1 HETATM 13 C C6 F45 . . . E 5 -8.386 26.757 -13.819 1 25.26 ? C6 F45 304 A 1 HETATM 14 C C5 F45 . . . E 5 -7.04 26.506 -13.629 1 22.2 ? C5 F45 304 A 1 HETATM 15 N N F45 . . . E 5 -6.588 28.86 -13.586 1 23.27 ? N F45 304 A 1 HETATM 16 C C4 F45 . . . E 5 -6.165 27.583 -13.523 1 25.27 ? C4 F45 304 A 1 HETATM 17 C C3 F45 . . . E 5 -4.697 27.392 -13.406 1 21.82 ? C3 F45 304 A 1 HETATM 18 C C2 F45 . . . E 5 -4.156 26.266 -12.789 1 28.52 ? C2 F45 304 A 1 HETATM 19 C C1 F45 . . . E 5 -2.788 26.067 -12.74 1 28.69 ? C1 F45 304 A 1 HETATM 20 C C16 F45 . . . E 5 -3.824 28.329 -13.958 1 20.18 ? C16 F45 304 A 1 HETATM 21 C C17 F45 . . . E 5 -2.454 28.135 -13.92 1 24.37 ? C17 F45 304 A 1 HETATM 22 O O3 F45 . . . E 5 -1.609 29.035 -14.481 1 25.73 ? O3 F45 304 A 1 HETATM 23 C C F45 . . . E 5 -1.929 26.995 -13.312 1 33.68 ? C F45 304 A 1 HETATM 24 O O F45 . . . E 5 -0.579 26.822 -13.318 1 27.73 ? O F45 304 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 24 #