data_6ZRA # _model_server_result.job_id 2dBkt0ppJN6mZbE1GTmw_g _model_server_result.datetime_utc '2024-12-22 18:13:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zra # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6ZRA # _exptl.entry_id 6ZRA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZRA _cell.length_a 91.15 _cell.length_b 91.15 _cell.length_c 132.498 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZRA _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall 'I 4 2' _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 91.15 0 3 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 6_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 91.15 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 255 A CYS 255 1_555 A SG CYS 255 A CYS 255 5_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 A O GLU 50 A GLU 50 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc2 A O LEU 53 A LEU 53 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc3 A O ALA 56 A ALA 56 1_555 E NA NA . A NA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc4 E NA NA . A NA 304 1_555 F O HOH . A HOH 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc5 E NA NA . A NA 304 1_555 F O HOH . A HOH 513 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.428 ? metalc ? metalc6 E NA NA . A NA 304 1_555 F O HOH . A HOH 513 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.35 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6ZRA _atom_sites.fract_transf_matrix[1][1] 0.010971 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010971 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007547 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QFT A 1 301 2 QFT B27 . C 3 BGC A 1 302 1 BGC BGC . D 4 NAD A 1 303 1 NAD NAD . E 5 NA A 1 304 1 NA NA . F 6 HOH A 1 401 92 HOH HOH . F 6 HOH A 2 402 57 HOH HOH . F 6 HOH A 3 403 114 HOH HOH . F 6 HOH A 4 404 129 HOH HOH . F 6 HOH A 5 405 33 HOH HOH . F 6 HOH A 6 406 134 HOH HOH . F 6 HOH A 7 407 110 HOH HOH . F 6 HOH A 8 408 45 HOH HOH . F 6 HOH A 9 409 5 HOH HOH . F 6 HOH A 10 410 56 HOH HOH . F 6 HOH A 11 411 91 HOH HOH . F 6 HOH A 12 412 6 HOH HOH . F 6 HOH A 13 413 11 HOH HOH . F 6 HOH A 14 414 120 HOH HOH . F 6 HOH A 15 415 4 HOH HOH . F 6 HOH A 16 416 76 HOH HOH . F 6 HOH A 17 417 16 HOH HOH . F 6 HOH A 18 418 127 HOH HOH . F 6 HOH A 19 419 27 HOH HOH . F 6 HOH A 20 420 67 HOH HOH . F 6 HOH A 21 421 73 HOH HOH . F 6 HOH A 22 422 50 HOH HOH . F 6 HOH A 23 423 47 HOH HOH . F 6 HOH A 24 424 62 HOH HOH . F 6 HOH A 25 425 80 HOH HOH . F 6 HOH A 26 426 18 HOH HOH . F 6 HOH A 27 427 35 HOH HOH . F 6 HOH A 28 428 55 HOH HOH . F 6 HOH A 29 429 75 HOH HOH . F 6 HOH A 30 430 119 HOH HOH . F 6 HOH A 31 431 81 HOH HOH . F 6 HOH A 32 432 49 HOH HOH . F 6 HOH A 33 433 3 HOH HOH . F 6 HOH A 34 434 34 HOH HOH . F 6 HOH A 35 435 106 HOH HOH . F 6 HOH A 36 436 19 HOH HOH . F 6 HOH A 37 437 90 HOH HOH . F 6 HOH A 38 438 13 HOH HOH . F 6 HOH A 39 439 43 HOH HOH . F 6 HOH A 40 440 96 HOH HOH . F 6 HOH A 41 441 64 HOH HOH . F 6 HOH A 42 442 9 HOH HOH . F 6 HOH A 43 443 72 HOH HOH . F 6 HOH A 44 444 112 HOH HOH . F 6 HOH A 45 445 39 HOH HOH . F 6 HOH A 46 446 17 HOH HOH . F 6 HOH A 47 447 121 HOH HOH . F 6 HOH A 48 448 20 HOH HOH . F 6 HOH A 49 449 103 HOH HOH . F 6 HOH A 50 450 61 HOH HOH . F 6 HOH A 51 451 28 HOH HOH . F 6 HOH A 52 452 65 HOH HOH . F 6 HOH A 53 453 36 HOH HOH . F 6 HOH A 54 454 138 HOH HOH . F 6 HOH A 55 455 101 HOH HOH . F 6 HOH A 56 456 124 HOH HOH . F 6 HOH A 57 457 32 HOH HOH . F 6 HOH A 58 458 104 HOH HOH . F 6 HOH A 59 459 24 HOH HOH . F 6 HOH A 60 460 63 HOH HOH . F 6 HOH A 61 461 109 HOH HOH . F 6 HOH A 62 462 87 HOH HOH . F 6 HOH A 63 463 7 HOH HOH . F 6 HOH A 64 464 42 HOH HOH . F 6 HOH A 65 465 133 HOH HOH . F 6 HOH A 66 466 85 HOH HOH . F 6 HOH A 67 467 51 HOH HOH . F 6 HOH A 68 468 122 HOH HOH . F 6 HOH A 69 469 125 HOH HOH . F 6 HOH A 70 470 132 HOH HOH . F 6 HOH A 71 471 111 HOH HOH . F 6 HOH A 72 472 97 HOH HOH . F 6 HOH A 73 473 25 HOH HOH . F 6 HOH A 74 474 26 HOH HOH . F 6 HOH A 75 475 66 HOH HOH . F 6 HOH A 76 476 48 HOH HOH . F 6 HOH A 77 477 38 HOH HOH . F 6 HOH A 78 478 14 HOH HOH . F 6 HOH A 79 479 52 HOH HOH . F 6 HOH A 80 480 118 HOH HOH . F 6 HOH A 81 481 123 HOH HOH . F 6 HOH A 82 482 40 HOH HOH . F 6 HOH A 83 483 37 HOH HOH . F 6 HOH A 84 484 8 HOH HOH . F 6 HOH A 85 485 46 HOH HOH . F 6 HOH A 86 486 29 HOH HOH . F 6 HOH A 87 487 128 HOH HOH . F 6 HOH A 88 488 68 HOH HOH . F 6 HOH A 89 489 30 HOH HOH . F 6 HOH A 90 490 22 HOH HOH . F 6 HOH A 91 491 140 HOH HOH . F 6 HOH A 92 492 21 HOH HOH . F 6 HOH A 93 493 116 HOH HOH . F 6 HOH A 94 494 69 HOH HOH . F 6 HOH A 95 495 144 HOH HOH . F 6 HOH A 96 496 84 HOH HOH . F 6 HOH A 97 497 135 HOH HOH . F 6 HOH A 98 498 95 HOH HOH . F 6 HOH A 99 499 137 HOH HOH . F 6 HOH A 100 500 15 HOH HOH . F 6 HOH A 101 501 53 HOH HOH . F 6 HOH A 102 502 79 HOH HOH . F 6 HOH A 103 503 77 HOH HOH . F 6 HOH A 104 504 115 HOH HOH . F 6 HOH A 105 505 142 HOH HOH . F 6 HOH A 106 506 54 HOH HOH . F 6 HOH A 107 507 107 HOH HOH . F 6 HOH A 108 508 105 HOH HOH . F 6 HOH A 109 509 98 HOH HOH . F 6 HOH A 110 510 139 HOH HOH . F 6 HOH A 111 511 82 HOH HOH . F 6 HOH A 112 512 93 HOH HOH . F 6 HOH A 113 513 117 HOH HOH . F 6 HOH A 114 514 74 HOH HOH . F 6 HOH A 115 515 86 HOH HOH . F 6 HOH A 116 516 44 HOH HOH . F 6 HOH A 117 517 130 HOH HOH . F 6 HOH A 118 518 83 HOH HOH . F 6 HOH A 119 519 60 HOH HOH . F 6 HOH A 120 520 100 HOH HOH . F 6 HOH A 121 521 141 HOH HOH . F 6 HOH A 122 522 108 HOH HOH . F 6 HOH A 123 523 131 HOH HOH . F 6 HOH A 124 524 136 HOH HOH . F 6 HOH A 125 525 71 HOH HOH . F 6 HOH A 126 526 102 HOH HOH . F 6 HOH A 127 527 113 HOH HOH . F 6 HOH A 128 528 143 HOH HOH . F 6 HOH A 129 529 78 HOH HOH . F 6 HOH A 130 530 126 HOH HOH . F 6 HOH A 131 531 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . C 3 -22.47 28.35 -13.126 0.82 32.08 ? C2 BGC 302 A 1 HETATM 2 C C3 BGC . . . C 3 -22.611 26.983 -12.533 0.82 32.53 ? C3 BGC 302 A 1 HETATM 3 C C4 BGC . . . C 3 -21.597 26.006 -12.958 0.82 34.43 ? C4 BGC 302 A 1 HETATM 4 C C5 BGC . . . C 3 -20.168 26.603 -13.035 0.82 30.82 ? C5 BGC 302 A 1 HETATM 5 C C6 BGC . . . C 3 -19.156 25.598 -13.771 0.82 28.31 ? C6 BGC 302 A 1 HETATM 6 C C1 BGC . . . C 3 -21.013 28.866 -13.143 0.82 28.54 ? C1 BGC 302 A 1 HETATM 7 O O1 BGC . . . C 3 -20.976 30.06 -13.894 0.82 27.91 ? O1 BGC 302 A 1 HETATM 8 O O2 BGC . . . C 3 -23.267 29.298 -12.411 0.82 32.04 ? O2 BGC 302 A 1 HETATM 9 O O3 BGC . . . C 3 -23.911 26.488 -12.883 0.82 35.43 ? O3 BGC 302 A 1 HETATM 10 O O4 BGC . . . C 3 -21.579 24.927 -11.995 0.82 38.42 ? O4 BGC 302 A 1 HETATM 11 O O5 BGC . . . C 3 -20.162 27.878 -13.78 0.82 29.43 ? O5 BGC 302 A 1 HETATM 12 O O6 BGC . . . C 3 -19.483 25.608 -15.159 0.82 32.38 ? O6 BGC 302 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 12 #