data_6ZU8
#
_model_server_result.job_id            c5DZ0y8LmaImGRTNc5ZR3A 
_model_server_result.datetime_utc      '2024-11-26 05:28:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zu8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    6ZU8 
#
_exptl.entry_id    6ZU8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              487.954 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ZU8 
_cell.length_a            43.107 
_cell.length_b            49.269 
_cell.length_c            83.74 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZU8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 84 A CYS 122 1_555 C C30 0WN . A 0WN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.685 ? 
metalc ? metalc1 A OE2 GLU 129 A GLU 167 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? 
metalc ? metalc2 A SG CYS 148 A CYS 186 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? 
metalc ? metalc3 A NE2 HIS 187 A HIS 226 1_555 B ZN ZN . A ZN 301 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc4 A ND1 HIS 189 A HIS 228 1_555 B ZN ZN . A ZN 301 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? 
#
_chem_comp.formula           'C24 H27 Cl F N5 O3' 
_chem_comp.formula_weight    487.954 
_chem_comp.id                0WN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Afatinib, bound form' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
F18 C13 0WN sing 1 n n 
C13 C15 0WN doub 2 n y 
C13 C12 0WN sing 3 n y 
CL1 C12 0WN sing 4 n n 
C15 C17 0WN sing 5 n y 
C12 C14 0WN doub 6 n y 
C17 C16 0WN doub 7 n y 
C14 C16 0WN sing 8 n y 
C16 N11 0WN sing 9 n n 
N11 C4 0WN sing 10 n n 
N2 C4 0WN doub 11 n y 
N2 C1 0WN sing 12 n y 
C4 C6 0WN sing 13 n y 
C1 N3 0WN doub 14 n y 
C6 C8 0WN doub 15 n y 
C6 C5 0WN sing 16 n y 
C33 N32 0WN sing 17 n n 
C8 C7 0WN sing 18 n y 
N3 C5 0WN sing 19 n y 
C5 C10 0WN doub 20 n y 
O29 C27 0WN doub 21 n n 
N32 C34 0WN sing 22 n n 
N32 C31 0WN sing 23 n n 
C7 N26 0WN sing 24 n n 
C7 C9 0WN doub 25 n y 
C10 C9 0WN sing 26 n y 
C27 N26 0WN sing 27 n n 
C27 C28 0WN sing 28 n n 
C9 O20 0WN sing 29 n n 
C31 C30 0WN sing 30 n n 
C30 C28 0WN sing 31 n n 
O20 C21 0WN sing 32 n n 
C22 C21 0WN sing 33 n n 
C22 O23 0WN sing 34 n n 
C21 C25 0WN sing 35 n n 
O23 C24 0WN sing 36 n n 
C25 C24 0WN sing 37 n n 
C1 H1 0WN sing 38 n n 
C8 H2 0WN sing 39 n n 
C10 H3 0WN sing 40 n n 
N11 H4 0WN sing 41 n n 
C14 H5 0WN sing 42 n n 
C15 H6 0WN sing 43 n n 
C17 H7 0WN sing 44 n n 
C21 H8 0WN sing 45 n n 
C22 H9 0WN sing 46 n n 
C22 H10 0WN sing 47 n n 
C24 H11 0WN sing 48 n n 
C24 H12 0WN sing 49 n n 
C25 H13 0WN sing 50 n n 
C25 H14 0WN sing 51 n n 
N26 H15 0WN sing 52 n n 
C28 H16 0WN sing 53 n n 
C28 H17 0WN sing 54 n n 
C30 H18 0WN sing 55 n n 
C30 H19 0WN sing 56 n n 
C31 H20 0WN sing 57 n n 
C31 H21 0WN sing 58 n n 
C33 H23 0WN sing 59 n n 
C33 H24 0WN sing 60 n n 
C33 H25 0WN sing 61 n n 
C34 H26 0WN sing 62 n n 
C34 H27 0WN sing 63 n n 
C34 H28 0WN sing 64 n n 
#
_atom_sites.entry_id                     6ZU8 
_atom_sites.fract_transf_matrix[1][1]    0.023198 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020297 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011942 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 1 ZN ZN . 
C 3 0WN A 1 302 1 0WN AFT . 
D 4 HOH A 1 401 1 HOH HOH . 
D 4 HOH A 2 402 63 HOH HOH . 
D 4 HOH A 3 403 56 HOH HOH . 
D 4 HOH A 4 404 28 HOH HOH . 
D 4 HOH A 5 405 37 HOH HOH . 
D 4 HOH A 6 406 45 HOH HOH . 
D 4 HOH A 7 407 22 HOH HOH . 
D 4 HOH A 8 408 7 HOH HOH . 
D 4 HOH A 9 409 29 HOH HOH . 
D 4 HOH A 10 410 14 HOH HOH . 
D 4 HOH A 11 411 61 HOH HOH . 
D 4 HOH A 12 412 13 HOH HOH . 
D 4 HOH A 13 413 52 HOH HOH . 
D 4 HOH A 14 414 8 HOH HOH . 
D 4 HOH A 15 415 15 HOH HOH . 
D 4 HOH A 16 416 67 HOH HOH . 
D 4 HOH A 17 417 20 HOH HOH . 
D 4 HOH A 18 418 19 HOH HOH . 
D 4 HOH A 19 419 44 HOH HOH . 
D 4 HOH A 20 420 62 HOH HOH . 
D 4 HOH A 21 421 17 HOH HOH . 
D 4 HOH A 22 422 6 HOH HOH . 
D 4 HOH A 23 423 41 HOH HOH . 
D 4 HOH A 24 424 36 HOH HOH . 
D 4 HOH A 25 425 2 HOH HOH . 
D 4 HOH A 26 426 71 HOH HOH . 
D 4 HOH A 27 427 64 HOH HOH . 
D 4 HOH A 28 428 70 HOH HOH . 
D 4 HOH A 29 429 40 HOH HOH . 
D 4 HOH A 30 430 31 HOH HOH . 
D 4 HOH A 31 431 11 HOH HOH . 
D 4 HOH A 32 432 68 HOH HOH . 
D 4 HOH A 33 433 73 HOH HOH . 
D 4 HOH A 34 434 30 HOH HOH . 
D 4 HOH A 35 435 25 HOH HOH . 
D 4 HOH A 36 436 9 HOH HOH . 
D 4 HOH A 37 437 5 HOH HOH . 
D 4 HOH A 38 438 43 HOH HOH . 
D 4 HOH A 39 439 50 HOH HOH . 
D 4 HOH A 40 440 4 HOH HOH . 
D 4 HOH A 41 441 23 HOH HOH . 
D 4 HOH A 42 442 21 HOH HOH . 
D 4 HOH A 43 443 24 HOH HOH . 
D 4 HOH A 44 444 53 HOH HOH . 
D 4 HOH A 45 445 27 HOH HOH . 
D 4 HOH A 46 446 3 HOH HOH . 
D 4 HOH A 47 447 18 HOH HOH . 
D 4 HOH A 48 448 16 HOH HOH . 
D 4 HOH A 49 449 49 HOH HOH . 
D 4 HOH A 50 450 54 HOH HOH . 
D 4 HOH A 51 451 60 HOH HOH . 
D 4 HOH A 52 452 47 HOH HOH . 
D 4 HOH A 53 453 58 HOH HOH . 
D 4 HOH A 54 454 39 HOH HOH . 
D 4 HOH A 55 455 33 HOH HOH . 
D 4 HOH A 56 456 12 HOH HOH . 
D 4 HOH A 57 457 48 HOH HOH . 
D 4 HOH A 58 458 55 HOH HOH . 
D 4 HOH A 59 459 59 HOH HOH . 
D 4 HOH A 60 460 57 HOH HOH . 
D 4 HOH A 61 461 46 HOH HOH . 
D 4 HOH A 62 462 10 HOH HOH . 
D 4 HOH A 63 463 32 HOH HOH . 
D 4 HOH A 64 464 69 HOH HOH . 
D 4 HOH A 65 465 72 HOH HOH . 
D 4 HOH A 66 466 38 HOH HOH . 
D 4 HOH A 67 467 74 HOH HOH . 
D 4 HOH A 68 468 51 HOH HOH . 
D 4 HOH A 69 469 35 HOH HOH . 
D 4 HOH A 70 470 34 HOH HOH . 
D 4 HOH A 71 471 66 HOH HOH . 
D 4 HOH A 72 472 42 HOH HOH . 
D 4 HOH A 73 473 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 0WN . . . C 3 -4.504 21.085 -27.123 1 40.02 ? C1 0WN 302 A 1 
HETATM 2 N N2 0WN . . . C 3 -5.013 20.819 -25.907 1 49.12 ? N2 0WN 302 A 1 
HETATM 3 N N3 0WN . . . C 3 -3.254 21.083 -27.509 1 40.84 ? N3 0WN 302 A 1 
HETATM 4 C C4 0WN . . . C 3 -4.134 20.527 -24.954 1 46.31 ? C4 0WN 302 A 1 
HETATM 5 C C5 0WN . . . C 3 -2.334 20.794 -26.537 1 41.47 ? C5 0WN 302 A 1 
HETATM 6 C C6 0WN . . . C 3 -2.721 20.502 -25.215 1 42.27 ? C6 0WN 302 A 1 
HETATM 7 C C7 0WN . . . C 3 -0.429 20.171 -24.611 1 39.66 ? C7 0WN 302 A 1 
HETATM 8 C C8 0WN . . . C 3 -1.733 20.192 -24.269 1 36.14 ? C8 0WN 302 A 1 
HETATM 9 C C9 0WN . . . C 3 -0.04 20.466 -25.92 1 39.07 ? C9 0WN 302 A 1 
HETATM 10 C C10 0WN . . . C 3 -0.967 20.77 -26.872 1 38.32 ? C10 0WN 302 A 1 
HETATM 11 N N11 0WN . . . C 3 -4.571 20.255 -23.698 1 45.51 ? N11 0WN 302 A 1 
HETATM 12 C C12 0WN . . . C 3 -8.198 19.629 -23.506 1 47.1 ? C12 0WN 302 A 1 
HETATM 13 C C13 0WN . . . C 3 -8.44 20.153 -22.276 1 47.56 ? C13 0WN 302 A 1 
HETATM 14 C C14 0WN . . . C 3 -6.919 19.665 -24.03 1 44.79 ? C14 0WN 302 A 1 
HETATM 15 C C15 0WN . . . C 3 -7.457 20.709 -21.512 1 52.19 ? C15 0WN 302 A 1 
HETATM 16 C C16 0WN . . . C 3 -5.896 20.205 -23.254 1 44.26 ? C16 0WN 302 A 1 
HETATM 17 C C17 0WN . . . C 3 -6.164 20.71 -21.996 1 43.12 ? C17 0WN 302 A 1 
HETATM 18 F F18 0WN . . . C 3 -9.702 20.128 -21.8 1 62.97 ? F18 0WN 302 A 1 
HETATM 19 CL CL1 0WN . . . C 3 -9.514 18.972 -24.412 1 65.55 ? CL1 0WN 302 A 1 
HETATM 20 O O20 0WN . . . C 3 1.3 20.447 -26.173 1 42.09 ? O20 0WN 302 A 1 
HETATM 21 C C21 0WN . . . C 3 1.748 20.582 -27.519 1 38.83 ? C21 0WN 302 A 1 
HETATM 22 C C22 0WN . . . C 3 3.26 20.422 -27.48 1 35.48 ? C22 0WN 302 A 1 
HETATM 23 O O23 0WN . . . C 3 3.716 21.651 -26.913 1 43.19 ? O23 0WN 302 A 1 
HETATM 24 C C24 0WN . . . C 3 2.758 22.666 -27.122 1 36.84 ? C24 0WN 302 A 1 
HETATM 25 C C25 0WN . . . C 3 1.595 22.062 -27.817 1 46.27 ? C25 0WN 302 A 1 
HETATM 26 N N26 0WN . . . C 3 0.606 19.889 -23.691 1 38.54 ? N26 0WN 302 A 1 
HETATM 27 C C27 0WN . . . C 3 0.544 19.302 -22.48 1 46.4 ? C27 0WN 302 A 1 
HETATM 28 C C28 0WN . . . C 3 1.88 19.138 -21.788 1 41.5 ? C28 0WN 302 A 1 
HETATM 29 O O29 0WN . . . C 3 -0.491 18.92 -21.982 1 44.65 ? O29 0WN 302 A 1 
HETATM 30 C C30 0WN . . . C 3 1.848 19.367 -20.282 1 49.29 ? C30 0WN 302 A 1 
HETATM 31 C C31 0WN . . . C 3 2.596 20.622 -19.833 1 49.02 ? C31 0WN 302 A 1 
HETATM 32 N N32 0WN . . . C 3 2.256 21.086 -18.484 1 51.3 ? N32 0WN 302 A 1 
HETATM 33 C C33 0WN . . . C 3 3.061 22.249 -18.122 1 50.9 ? C33 0WN 302 A 1 
HETATM 34 C C34 0WN . . . C 3 0.847 21.446 -18.42 1 47.05 ? C34 0WN 302 A 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           34 
#