data_6ZUP # _model_server_result.job_id TOroQT6EcWUqr7t4PNAjlA _model_server_result.datetime_utc '2024-11-25 08:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zup # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":404}' # _entry.id 6ZUP # _exptl.entry_id 6ZUP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 166.174 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ALPHA-HYDROXY-BETA-PHENYL-PROPIONIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103 _cell.angle_gamma 90 _cell.entry_id 6ZUP _cell.length_a 71.39 _cell.length_b 60.39 _cell.length_c 81.94 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZUP _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 180 B CYS 180 1_555 A SG CYS 181 B CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? disulf ? disulf2 B SG CYS 180 A CYS 180 1_555 B SG CYS 181 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? covale ? covale1 B NZ LYS 246 A LYS 246 1_555 H C4A PLP . A PLP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? metalc ? metalc1 C MG MG . B MG 401 1_555 L O HOH . B HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc2 C MG MG . B MG 401 1_555 L O HOH . B HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc3 C MG MG . B MG 401 1_555 L O HOH . B HOH 516 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc4 C MG MG . B MG 401 1_555 L O HOH . B HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc5 C MG MG . B MG 401 1_555 M O HOH . A HOH 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc6 C MG MG . B MG 401 1_555 M O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? # _chem_comp.formula 'C9 H10 O3' _chem_comp.formula_weight 166.174 _chem_comp.id HFA _chem_comp.mon_nstd_flag . _chem_comp.name 'ALPHA-HYDROXY-BETA-PHENYL-PROPIONIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OA CA HFA sing 129 n n OA HOA HFA sing 130 n n CA C HFA sing 131 n n CA CB HFA sing 132 n n CA HA HFA sing 133 n n C O HFA doub 134 n n C OXT HFA sing 135 n n CB CG HFA sing 136 n n CB HB1 HFA sing 137 n n CB HB2 HFA sing 138 n n CG CD1 HFA doub 139 n y CG CD2 HFA sing 140 n y CD1 CE1 HFA sing 141 n y CD1 HD1 HFA sing 142 n n CD2 CE2 HFA doub 143 n y CD2 HD2 HFA sing 144 n n CE1 CZ HFA doub 145 n y CE1 HE1 HFA sing 146 n n CE2 CZ HFA sing 147 n y CE2 HE2 HFA sing 148 n n CZ HZ HFA sing 149 n n OXT HXT HFA sing 150 n n # _atom_sites.entry_id 6ZUP _atom_sites.fract_transf_matrix[1][1] 0.014008 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003235 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016559 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG B 1 401 1 MG MG . D 3 PLP B 1 402 2 PLP PLP . E 4 NO3 B 1 403 3 NO3 NO3 . F 4 NO3 B 1 404 7 NO3 NO3 . G 5 HFA B 1 405 2 HFA HFA . H 3 PLP A 1 401 1 PLP PLP . I 4 NO3 A 1 402 4 NO3 NO3 . J 4 NO3 A 1 403 6 NO3 NO3 . K 5 HFA A 1 404 1 HFA HFA . L 6 HOH B 1 501 32 HOH HOH . L 6 HOH B 2 502 20 HOH HOH . L 6 HOH B 3 503 28 HOH HOH . L 6 HOH B 4 504 23 HOH HOH . L 6 HOH B 5 505 15 HOH HOH . L 6 HOH B 6 506 56 HOH HOH . L 6 HOH B 7 507 2 HOH HOH . L 6 HOH B 8 508 51 HOH HOH . L 6 HOH B 9 509 6 HOH HOH . L 6 HOH B 10 510 18 HOH HOH . L 6 HOH B 11 511 43 HOH HOH . L 6 HOH B 12 512 30 HOH HOH . L 6 HOH B 13 513 78 HOH HOH . L 6 HOH B 14 514 57 HOH HOH . L 6 HOH B 15 515 21 HOH HOH . L 6 HOH B 16 516 3 HOH HOH . L 6 HOH B 17 517 13 HOH HOH . L 6 HOH B 18 518 26 HOH HOH . L 6 HOH B 19 519 1 HOH HOH . L 6 HOH B 20 520 25 HOH HOH . L 6 HOH B 21 521 79 HOH HOH . L 6 HOH B 22 522 38 HOH HOH . L 6 HOH B 23 523 49 HOH HOH . L 6 HOH B 24 524 77 HOH HOH . L 6 HOH B 25 525 75 HOH HOH . L 6 HOH B 26 526 33 HOH HOH . L 6 HOH B 27 527 63 HOH HOH . L 6 HOH B 28 528 35 HOH HOH . L 6 HOH B 29 529 34 HOH HOH . L 6 HOH B 30 530 76 HOH HOH . L 6 HOH B 31 531 41 HOH HOH . L 6 HOH B 32 532 37 HOH HOH . L 6 HOH B 33 533 39 HOH HOH . L 6 HOH B 34 534 74 HOH HOH . L 6 HOH B 35 535 52 HOH HOH . L 6 HOH B 36 536 42 HOH HOH . L 6 HOH B 37 537 9 HOH HOH . L 6 HOH B 38 538 64 HOH HOH . M 6 HOH A 1 501 27 HOH HOH . M 6 HOH A 2 502 31 HOH HOH . M 6 HOH A 3 503 48 HOH HOH . M 6 HOH A 4 504 8 HOH HOH . M 6 HOH A 5 505 5 HOH HOH . M 6 HOH A 6 506 12 HOH HOH . M 6 HOH A 7 507 19 HOH HOH . M 6 HOH A 8 508 22 HOH HOH . M 6 HOH A 9 509 54 HOH HOH . M 6 HOH A 10 510 14 HOH HOH . M 6 HOH A 11 511 65 HOH HOH . M 6 HOH A 12 512 10 HOH HOH . M 6 HOH A 13 513 16 HOH HOH . M 6 HOH A 14 514 11 HOH HOH . M 6 HOH A 15 515 59 HOH HOH . M 6 HOH A 16 516 29 HOH HOH . M 6 HOH A 17 517 68 HOH HOH . M 6 HOH A 18 518 67 HOH HOH . M 6 HOH A 19 519 72 HOH HOH . M 6 HOH A 20 520 45 HOH HOH . M 6 HOH A 21 521 4 HOH HOH . M 6 HOH A 22 522 7 HOH HOH . M 6 HOH A 23 523 46 HOH HOH . M 6 HOH A 24 524 53 HOH HOH . M 6 HOH A 25 525 40 HOH HOH . M 6 HOH A 26 526 50 HOH HOH . M 6 HOH A 27 527 66 HOH HOH . M 6 HOH A 28 528 69 HOH HOH . M 6 HOH A 29 529 36 HOH HOH . M 6 HOH A 30 530 44 HOH HOH . M 6 HOH A 31 531 60 HOH HOH . M 6 HOH A 32 532 70 HOH HOH . M 6 HOH A 33 533 62 HOH HOH . M 6 HOH A 34 534 24 HOH HOH . M 6 HOH A 35 535 73 HOH HOH . M 6 HOH A 36 536 17 HOH HOH . M 6 HOH A 37 537 55 HOH HOH . M 6 HOH A 38 538 47 HOH HOH . M 6 HOH A 39 539 61 HOH HOH . M 6 HOH A 40 540 58 HOH HOH . M 6 HOH A 41 541 71 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OA HFA . . . K 5 16.595 -11.472 14.232 1 88.32 ? OA HFA 404 A 1 HETATM 2 C CA HFA . . . K 5 17.464 -12.218 15.037 1 81.14 ? CA HFA 404 A 1 HETATM 3 C C HFA . . . K 5 16.666 -12.914 16.09 1 73.23 ? C HFA 404 A 1 HETATM 4 O O HFA . . . K 5 16.997 -14.049 16.476 1 75.16 ? O HFA 404 A 1 HETATM 5 C CB HFA . . . K 5 18.469 -11.28 15.665 1 89.55 ? CB HFA 404 A 1 HETATM 6 C CG HFA . . . K 5 19.621 -11.92 16.408 1 87.92 ? CG HFA 404 A 1 HETATM 7 C CD1 HFA . . . K 5 20.475 -11.125 17.152 1 86.71 ? CD1 HFA 404 A 1 HETATM 8 C CD2 HFA . . . K 5 19.821 -13.281 16.357 1 84.69 ? CD2 HFA 404 A 1 HETATM 9 C CE1 HFA . . . K 5 21.533 -11.685 17.84 1 86.19 ? CE1 HFA 404 A 1 HETATM 10 C CE2 HFA . . . K 5 20.878 -13.841 17.048 1 86.13 ? CE2 HFA 404 A 1 HETATM 11 C CZ HFA . . . K 5 21.734 -13.05 17.789 1 87.12 ? CZ HFA 404 A 1 HETATM 12 O OXT HFA . . . K 5 15.664 -12.353 16.564 1 75.13 -1 OXT HFA 404 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #