data_6ZVG
#
_model_server_result.job_id            ju7F5u-2cYrc8jdQ_cAP5w 
_model_server_result.datetime_utc      '2024-11-25 06:49:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zvg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    6ZVG 
#
_exptl.entry_id    6ZVG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.42 
_cell.angle_gamma         90 
_cell.entry_id            6ZVG 
_cell.length_a            177.267 
_cell.length_b            82.286 
_cell.length_c            98.208 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZVG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,P,Q 1 1 
C,D,L,M,N,O,R,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 246 A LYS 246 1_555 H C4A PLP . A PLP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? 
covale ? covale2 B NZ LYS 246 B LYS 246 1_555 K C4A PLP . B PLP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.271 ? 
covale ? covale3 C NZ LYS 246 C LYS 246 1_555 M C4A PLP . C PLP 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.284 ? 
covale ? covale4 D NZ LYS 246 D LYS 246 1_555 O C4A PLP . D PLP 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.265 ? 
metalc ? metalc1 E MG MG . A MG 401 1_555 G O3 NO3 . A NO3 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? 
metalc ? metalc2 E MG MG . A MG 401 1_555 P O HOH . A HOH 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc3 E MG MG . A MG 401 1_555 R O HOH . C HOH 517 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc4 F MG MG . A MG 402 1_555 P O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
metalc ? metalc5 F MG MG . A MG 402 1_555 P O HOH . A HOH 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? 
metalc ? metalc6 F MG MG . A MG 402 1_555 Q O HOH . B HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc7 F MG MG . A MG 402 1_555 Q O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc8 L MG MG . C MG 401 1_555 R O HOH . C HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? 
metalc ? metalc9 L MG MG . C MG 401 1_555 R O HOH . C HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc10 L MG MG . C MG 401 1_555 S O HOH . D HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? 
metalc ? metalc11 L MG MG . C MG 401 1_555 S O HOH . D HOH 513 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6ZVG 
_atom_sites.fract_transf_matrix[1][1]    0.005641 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001662 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012153 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010615 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MG A 1 401 1 MG MG . 
F 2 MG A 1 402 2 MG MG . 
G 3 NO3 A 1 403 1 NO3 NO3 . 
H 4 PLP A 1 404 1 PLP PLP . 
I 5 3IL A 1 405 1 3IL 3IL . 
J 3 NO3 B 1 401 2 NO3 NO3 . 
K 4 PLP B 1 402 2 PLP PLP . 
L 2 MG C 1 401 3 MG MG . 
M 4 PLP C 1 402 3 PLP PLP . 
N 5 3IL C 1 403 2 3IL 3IL . 
O 4 PLP D 1 401 4 PLP PLP . 
P 6 HOH A 1 501 32 HOH HOH . 
P 6 HOH A 2 502 150 HOH HOH . 
P 6 HOH A 3 503 1 HOH HOH . 
P 6 HOH A 4 504 46 HOH HOH . 
P 6 HOH A 5 505 117 HOH HOH . 
P 6 HOH A 6 506 75 HOH HOH . 
P 6 HOH A 7 507 8 HOH HOH . 
P 6 HOH A 8 508 19 HOH HOH . 
P 6 HOH A 9 509 100 HOH HOH . 
P 6 HOH A 10 510 39 HOH HOH . 
P 6 HOH A 11 511 61 HOH HOH . 
P 6 HOH A 12 512 48 HOH HOH . 
P 6 HOH A 13 513 47 HOH HOH . 
P 6 HOH A 14 514 41 HOH HOH . 
P 6 HOH A 15 515 87 HOH HOH . 
P 6 HOH A 16 516 40 HOH HOH . 
P 6 HOH A 17 517 38 HOH HOH . 
P 6 HOH A 18 518 113 HOH HOH . 
P 6 HOH A 19 519 6 HOH HOH . 
P 6 HOH A 20 520 4 HOH HOH . 
P 6 HOH A 21 521 16 HOH HOH . 
P 6 HOH A 22 522 153 HOH HOH . 
P 6 HOH A 23 523 91 HOH HOH . 
P 6 HOH A 24 524 71 HOH HOH . 
P 6 HOH A 25 525 144 HOH HOH . 
P 6 HOH A 26 526 108 HOH HOH . 
P 6 HOH A 27 527 106 HOH HOH . 
P 6 HOH A 28 528 121 HOH HOH . 
P 6 HOH A 29 529 2 HOH HOH . 
P 6 HOH A 30 530 122 HOH HOH . 
P 6 HOH A 31 531 95 HOH HOH . 
P 6 HOH A 32 532 83 HOH HOH . 
P 6 HOH A 33 533 30 HOH HOH . 
P 6 HOH A 34 534 90 HOH HOH . 
P 6 HOH A 35 535 138 HOH HOH . 
P 6 HOH A 36 536 120 HOH HOH . 
P 6 HOH A 37 537 88 HOH HOH . 
P 6 HOH A 38 538 114 HOH HOH . 
P 6 HOH A 39 539 97 HOH HOH . 
P 6 HOH A 40 540 94 HOH HOH . 
P 6 HOH A 41 541 86 HOH HOH . 
P 6 HOH A 42 542 102 HOH HOH . 
P 6 HOH A 43 543 112 HOH HOH . 
P 6 HOH A 44 544 85 HOH HOH . 
P 6 HOH A 45 545 151 HOH HOH . 
P 6 HOH A 46 546 89 HOH HOH . 
Q 6 HOH B 1 501 69 HOH HOH . 
Q 6 HOH B 2 502 7 HOH HOH . 
Q 6 HOH B 3 503 56 HOH HOH . 
Q 6 HOH B 4 504 55 HOH HOH . 
Q 6 HOH B 5 505 3 HOH HOH . 
Q 6 HOH B 6 506 76 HOH HOH . 
Q 6 HOH B 7 507 111 HOH HOH . 
Q 6 HOH B 8 508 92 HOH HOH . 
Q 6 HOH B 9 509 34 HOH HOH . 
Q 6 HOH B 10 510 33 HOH HOH . 
Q 6 HOH B 11 511 9 HOH HOH . 
Q 6 HOH B 12 512 146 HOH HOH . 
Q 6 HOH B 13 513 78 HOH HOH . 
Q 6 HOH B 14 514 36 HOH HOH . 
Q 6 HOH B 15 515 81 HOH HOH . 
Q 6 HOH B 16 516 35 HOH HOH . 
Q 6 HOH B 17 517 37 HOH HOH . 
Q 6 HOH B 18 518 50 HOH HOH . 
Q 6 HOH B 19 519 12 HOH HOH . 
Q 6 HOH B 20 520 107 HOH HOH . 
Q 6 HOH B 21 521 14 HOH HOH . 
Q 6 HOH B 22 522 98 HOH HOH . 
Q 6 HOH B 23 523 125 HOH HOH . 
Q 6 HOH B 24 524 105 HOH HOH . 
Q 6 HOH B 25 525 118 HOH HOH . 
Q 6 HOH B 26 526 58 HOH HOH . 
Q 6 HOH B 27 527 44 HOH HOH . 
Q 6 HOH B 28 528 135 HOH HOH . 
Q 6 HOH B 29 529 67 HOH HOH . 
Q 6 HOH B 30 530 43 HOH HOH . 
Q 6 HOH B 31 531 160 HOH HOH . 
Q 6 HOH B 32 532 124 HOH HOH . 
Q 6 HOH B 33 533 13 HOH HOH . 
Q 6 HOH B 34 534 57 HOH HOH . 
Q 6 HOH B 35 535 154 HOH HOH . 
Q 6 HOH B 36 536 116 HOH HOH . 
Q 6 HOH B 37 537 136 HOH HOH . 
R 6 HOH C 1 501 10 HOH HOH . 
R 6 HOH C 2 502 127 HOH HOH . 
R 6 HOH C 3 503 77 HOH HOH . 
R 6 HOH C 4 504 11 HOH HOH . 
R 6 HOH C 5 505 128 HOH HOH . 
R 6 HOH C 6 506 49 HOH HOH . 
R 6 HOH C 7 507 96 HOH HOH . 
R 6 HOH C 8 508 141 HOH HOH . 
R 6 HOH C 9 509 31 HOH HOH . 
R 6 HOH C 10 510 103 HOH HOH . 
R 6 HOH C 11 511 74 HOH HOH . 
R 6 HOH C 12 512 119 HOH HOH . 
R 6 HOH C 13 513 73 HOH HOH . 
R 6 HOH C 14 514 52 HOH HOH . 
R 6 HOH C 15 515 115 HOH HOH . 
R 6 HOH C 16 516 145 HOH HOH . 
R 6 HOH C 17 517 104 HOH HOH . 
R 6 HOH C 18 518 137 HOH HOH . 
R 6 HOH C 19 519 5 HOH HOH . 
R 6 HOH C 20 520 163 HOH HOH . 
R 6 HOH C 21 521 123 HOH HOH . 
R 6 HOH C 22 522 126 HOH HOH . 
R 6 HOH C 23 523 64 HOH HOH . 
R 6 HOH C 24 524 62 HOH HOH . 
R 6 HOH C 25 525 152 HOH HOH . 
R 6 HOH C 26 526 22 HOH HOH . 
R 6 HOH C 27 527 131 HOH HOH . 
R 6 HOH C 28 528 45 HOH HOH . 
R 6 HOH C 29 529 60 HOH HOH . 
R 6 HOH C 30 530 84 HOH HOH . 
R 6 HOH C 31 531 70 HOH HOH . 
R 6 HOH C 32 532 129 HOH HOH . 
R 6 HOH C 33 533 142 HOH HOH . 
R 6 HOH C 34 534 65 HOH HOH . 
R 6 HOH C 35 535 148 HOH HOH . 
R 6 HOH C 36 536 149 HOH HOH . 
R 6 HOH C 37 537 143 HOH HOH . 
R 6 HOH C 38 538 63 HOH HOH . 
R 6 HOH C 39 539 139 HOH HOH . 
S 6 HOH D 1 501 54 HOH HOH . 
S 6 HOH D 2 502 42 HOH HOH . 
S 6 HOH D 3 503 68 HOH HOH . 
S 6 HOH D 4 504 27 HOH HOH . 
S 6 HOH D 5 505 80 HOH HOH . 
S 6 HOH D 6 506 18 HOH HOH . 
S 6 HOH D 7 507 25 HOH HOH . 
S 6 HOH D 8 508 162 HOH HOH . 
S 6 HOH D 9 509 51 HOH HOH . 
S 6 HOH D 10 510 17 HOH HOH . 
S 6 HOH D 11 511 147 HOH HOH . 
S 6 HOH D 12 512 20 HOH HOH . 
S 6 HOH D 13 513 99 HOH HOH . 
S 6 HOH D 14 514 59 HOH HOH . 
S 6 HOH D 15 515 159 HOH HOH . 
S 6 HOH D 16 516 66 HOH HOH . 
S 6 HOH D 17 517 101 HOH HOH . 
S 6 HOH D 18 518 157 HOH HOH . 
S 6 HOH D 19 519 28 HOH HOH . 
S 6 HOH D 20 520 23 HOH HOH . 
S 6 HOH D 21 521 79 HOH HOH . 
S 6 HOH D 22 522 130 HOH HOH . 
S 6 HOH D 23 523 133 HOH HOH . 
S 6 HOH D 24 524 158 HOH HOH . 
S 6 HOH D 25 525 140 HOH HOH . 
S 6 HOH D 26 526 109 HOH HOH . 
S 6 HOH D 27 527 82 HOH HOH . 
S 6 HOH D 28 528 110 HOH HOH . 
S 6 HOH D 29 529 21 HOH HOH . 
S 6 HOH D 30 530 15 HOH HOH . 
S 6 HOH D 31 531 26 HOH HOH . 
S 6 HOH D 32 532 155 HOH HOH . 
S 6 HOH D 33 533 132 HOH HOH . 
S 6 HOH D 34 534 156 HOH HOH . 
S 6 HOH D 35 535 161 HOH HOH . 
S 6 HOH D 36 536 24 HOH HOH . 
S 6 HOH D 37 537 53 HOH HOH . 
S 6 HOH D 38 538 29 HOH HOH . 
S 6 HOH D 39 539 93 HOH HOH . 
S 6 HOH D 40 540 134 HOH HOH . 
S 6 HOH D 41 541 72 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               67.858 
_atom_site.Cartn_y               49.774 
_atom_site.Cartn_z               73.809 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        65.93 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    29 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#