data_6ZWE # _model_server_result.job_id TAZ1N66fBxh422yU6DiEkg _model_server_result.datetime_utc '2024-10-15 10:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zwe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"QA","auth_seq_id":614}' # _entry.id 6ZWE # _exptl.entry_id 6ZWE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 23 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ZWE _cell.length_a 211.35 _cell.length_b 211.35 _cell.length_c 115.9 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZWE _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 S N N ? 8 T N N ? 8 U N N ? 8 V N N ? 8 W N N ? 8 X N N ? 8 Y N N ? 8 Z N N ? 8 AA N N ? 8 BA N N ? 8 CA N N ? 8 MA N N ? 8 NA N N ? 8 OA N N ? 8 PA N N ? 8 QA N N ? 8 RA N N ? 8 SA N N ? 8 TA N N ? 8 UA N N ? 8 VA N N ? 8 WA N N ? 8 XA N N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 2 3 1 FUC NAG C1 O1 . O6 HO6 . sing 3 ? 3 2 1 NAG NAG C1 O1 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C NAG 1 C 1 NAG A 600 NAG 2 n C NAG 2 C 2 NAG A 601 NAG 2 n C FUC 3 C 3 FUC A 602 FUC 3 n D NAG 1 D 1 NAG A 603 NAG 3 n D NAG 2 D 2 NAG A 605 NAG 2 n E NAG 1 E 1 NAG B 600 NAG 2 n E NAG 2 E 2 NAG B 601 NAG 2 n E FUC 3 E 3 FUC B 602 FUC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 68 A CYS 69 1_555 A SG CYS 95 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 256 A CYS 257 1_555 A SG CYS 271 A CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 408 A CYS 409 1_555 A SG CYS 528 A CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 B SG CYS 68 B CYS 69 1_555 B SG CYS 95 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 B SG CYS 256 B CYS 257 1_555 B SG CYS 271 B CYS 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 B SG CYS 408 B CYS 409 1_555 B SG CYS 528 B CYS 529 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A ND2 ASN 264 A ASN 265 1_555 D C1 NAG . D NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.438 ? covale ? covale2 A ND2 ASN 349 A ASN 350 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.43 ? covale ? covale3 A ND2 ASN 463 A ASN 464 1_555 F C1 NAG . A NAG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale4 B ND2 ASN 349 B ASN 350 1_555 E C1 NAG . E NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.463 ? covale ? covale5 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale6 C O6 NAG . C NAG 1 1_555 C C1 FUC . C FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? covale ? covale7 D O3 NAG . D NAG 1 1_555 D C1 NAG . D NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale8 E O4 NAG . E NAG 1 1_555 E C1 NAG . E NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? covale ? covale9 E O6 NAG . E NAG 1 1_555 E C1 FUC . E FUC 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.467 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ZWE _atom_sites.fract_transf_matrix[1][1] 0.004731 _atom_sites.fract_transf_matrix[1][2] 0.002732 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005463 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008628 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 4 NAG A 1 601 604 NAG NAG . G 5 QRH A 1 602 701 QRH FB3 . H 6 SO4 A 1 603 1 SO4 SO4 . I 6 SO4 A 1 604 3 SO4 SO4 . J 6 SO4 A 1 605 4 SO4 SO4 . K 6 SO4 A 1 606 5 SO4 SO4 . L 6 SO4 A 1 607 7 SO4 SO4 . M 6 SO4 A 1 608 8 SO4 SO4 . N 6 SO4 A 1 609 14 SO4 SO4 . O 6 SO4 A 1 610 15 SO4 SO4 . P 6 SO4 A 1 611 16 SO4 SO4 . Q 6 SO4 A 1 612 21 SO4 SO4 . R 7 BR A 1 613 2 BR BR . S 8 CL A 1 614 5 CL CL . T 8 CL A 1 615 6 CL CL . U 8 CL A 1 616 8 CL CL . V 8 CL A 1 617 11 CL CL . W 8 CL A 1 618 15 CL CL . X 8 CL A 1 619 17 CL CL . Y 8 CL A 1 620 22 CL CL . Z 8 CL A 1 621 24 CL CL . AA 8 CL A 1 622 25 CL CL . BA 8 CL A 1 623 27 CL CL . CA 8 CL A 1 624 28 CL CL . DA 6 SO4 B 1 601 2 SO4 SO4 . EA 6 SO4 B 1 602 6 SO4 SO4 . FA 6 SO4 B 1 603 9 SO4 SO4 . GA 6 SO4 B 1 604 10 SO4 SO4 . HA 6 SO4 B 1 605 11 SO4 SO4 . IA 6 SO4 B 1 606 17 SO4 SO4 . JA 6 SO4 B 1 607 18 SO4 SO4 . KA 6 SO4 B 1 608 19 SO4 SO4 . LA 7 BR B 1 609 7 BR BR . MA 8 CL B 1 610 1 CL CL . NA 8 CL B 1 611 2 CL CL . OA 8 CL B 1 612 3 CL CL . PA 8 CL B 1 613 7 CL CL . QA 8 CL B 1 614 9 CL CL . RA 8 CL B 1 615 10 CL CL . SA 8 CL B 1 616 12 CL CL . TA 8 CL B 1 617 14 CL CL . UA 8 CL B 1 618 16 CL CL . VA 8 CL B 1 619 20 CL CL . WA 8 CL B 1 620 30 CL CL . XA 8 CL B 1 621 32 CL CL . YA 9 HOH A 1 701 106 HOH HOH . YA 9 HOH A 2 702 51 HOH HOH . YA 9 HOH A 3 703 2 HOH HOH . YA 9 HOH A 4 704 10 HOH HOH . YA 9 HOH A 5 705 53 HOH HOH . YA 9 HOH A 6 706 5 HOH HOH . YA 9 HOH A 7 707 33 HOH HOH . YA 9 HOH A 8 708 137 HOH HOH . YA 9 HOH A 9 709 100 HOH HOH . YA 9 HOH A 10 710 48 HOH HOH . YA 9 HOH A 11 711 144 HOH HOH . YA 9 HOH A 12 712 112 HOH HOH . YA 9 HOH A 13 713 7 HOH HOH . YA 9 HOH A 14 714 136 HOH HOH . YA 9 HOH A 15 715 76 HOH HOH . YA 9 HOH A 16 716 134 HOH HOH . YA 9 HOH A 17 717 124 HOH HOH . YA 9 HOH A 18 718 117 HOH HOH . YA 9 HOH A 19 719 74 HOH HOH . YA 9 HOH A 20 720 13 HOH HOH . YA 9 HOH A 21 721 8 HOH HOH . YA 9 HOH A 22 722 11 HOH HOH . YA 9 HOH A 23 723 44 HOH HOH . YA 9 HOH A 24 724 111 HOH HOH . YA 9 HOH A 25 725 113 HOH HOH . YA 9 HOH A 26 726 145 HOH HOH . YA 9 HOH A 27 727 143 HOH HOH . YA 9 HOH A 28 728 105 HOH HOH . YA 9 HOH A 29 729 135 HOH HOH . YA 9 HOH A 30 730 140 HOH HOH . YA 9 HOH A 31 731 12 HOH HOH . YA 9 HOH A 32 732 34 HOH HOH . YA 9 HOH A 33 733 138 HOH HOH . YA 9 HOH A 34 734 43 HOH HOH . YA 9 HOH A 35 735 77 HOH HOH . YA 9 HOH A 36 736 1 HOH HOH . YA 9 HOH A 37 737 115 HOH HOH . YA 9 HOH A 38 738 47 HOH HOH . YA 9 HOH A 39 739 23 HOH HOH . YA 9 HOH A 40 740 70 HOH HOH . YA 9 HOH A 41 741 104 HOH HOH . YA 9 HOH A 42 742 90 HOH HOH . YA 9 HOH A 43 743 3 HOH HOH . YA 9 HOH A 44 744 83 HOH HOH . YA 9 HOH A 45 745 28 HOH HOH . YA 9 HOH A 46 746 146 HOH HOH . YA 9 HOH A 47 747 114 HOH HOH . YA 9 HOH A 48 748 19 HOH HOH . YA 9 HOH A 49 749 37 HOH HOH . YA 9 HOH A 50 750 107 HOH HOH . YA 9 HOH A 51 751 6 HOH HOH . YA 9 HOH A 52 752 116 HOH HOH . YA 9 HOH A 53 753 52 HOH HOH . YA 9 HOH A 54 754 80 HOH HOH . YA 9 HOH A 55 755 94 HOH HOH . YA 9 HOH A 56 756 50 HOH HOH . YA 9 HOH A 57 757 38 HOH HOH . YA 9 HOH A 58 758 69 HOH HOH . YA 9 HOH A 59 759 87 HOH HOH . YA 9 HOH A 60 760 45 HOH HOH . YA 9 HOH A 61 761 71 HOH HOH . YA 9 HOH A 62 762 78 HOH HOH . YA 9 HOH A 63 763 68 HOH HOH . YA 9 HOH A 64 764 49 HOH HOH . YA 9 HOH A 65 765 79 HOH HOH . YA 9 HOH A 66 766 85 HOH HOH . YA 9 HOH A 67 767 133 HOH HOH . YA 9 HOH A 68 768 72 HOH HOH . YA 9 HOH A 69 769 35 HOH HOH . YA 9 HOH A 70 770 26 HOH HOH . YA 9 HOH A 71 771 32 HOH HOH . YA 9 HOH A 72 772 25 HOH HOH . YA 9 HOH A 73 773 4 HOH HOH . YA 9 HOH A 74 774 99 HOH HOH . YA 9 HOH A 75 775 41 HOH HOH . YA 9 HOH A 76 776 119 HOH HOH . YA 9 HOH A 77 777 84 HOH HOH . YA 9 HOH A 78 778 24 HOH HOH . YA 9 HOH A 79 779 36 HOH HOH . YA 9 HOH A 80 780 9 HOH HOH . YA 9 HOH A 81 781 75 HOH HOH . YA 9 HOH A 82 782 91 HOH HOH . YA 9 HOH A 83 783 73 HOH HOH . YA 9 HOH A 84 784 39 HOH HOH . YA 9 HOH A 85 785 82 HOH HOH . YA 9 HOH A 86 786 27 HOH HOH . ZA 9 HOH B 1 701 128 HOH HOH . ZA 9 HOH B 2 702 57 HOH HOH . ZA 9 HOH B 3 703 17 HOH HOH . ZA 9 HOH B 4 704 63 HOH HOH . ZA 9 HOH B 5 705 121 HOH HOH . ZA 9 HOH B 6 706 131 HOH HOH . ZA 9 HOH B 7 707 97 HOH HOH . ZA 9 HOH B 8 708 132 HOH HOH . ZA 9 HOH B 9 709 142 HOH HOH . ZA 9 HOH B 10 710 62 HOH HOH . ZA 9 HOH B 11 711 18 HOH HOH . ZA 9 HOH B 12 712 20 HOH HOH . ZA 9 HOH B 13 713 21 HOH HOH . ZA 9 HOH B 14 714 89 HOH HOH . ZA 9 HOH B 15 715 126 HOH HOH . ZA 9 HOH B 16 716 109 HOH HOH . ZA 9 HOH B 17 717 139 HOH HOH . ZA 9 HOH B 18 718 101 HOH HOH . ZA 9 HOH B 19 719 96 HOH HOH . ZA 9 HOH B 20 720 102 HOH HOH . ZA 9 HOH B 21 721 110 HOH HOH . ZA 9 HOH B 22 722 129 HOH HOH . ZA 9 HOH B 23 723 22 HOH HOH . ZA 9 HOH B 24 724 67 HOH HOH . ZA 9 HOH B 25 725 31 HOH HOH . ZA 9 HOH B 26 726 130 HOH HOH . ZA 9 HOH B 27 727 30 HOH HOH . ZA 9 HOH B 28 728 127 HOH HOH . ZA 9 HOH B 29 729 122 HOH HOH . ZA 9 HOH B 30 730 123 HOH HOH . ZA 9 HOH B 31 731 60 HOH HOH . ZA 9 HOH B 32 732 118 HOH HOH . ZA 9 HOH B 33 733 81 HOH HOH . ZA 9 HOH B 34 734 15 HOH HOH . ZA 9 HOH B 35 735 29 HOH HOH . ZA 9 HOH B 36 736 42 HOH HOH . ZA 9 HOH B 37 737 14 HOH HOH . ZA 9 HOH B 38 738 88 HOH HOH . ZA 9 HOH B 39 739 46 HOH HOH . ZA 9 HOH B 40 740 125 HOH HOH . ZA 9 HOH B 41 741 65 HOH HOH . ZA 9 HOH B 42 742 86 HOH HOH . ZA 9 HOH B 43 743 61 HOH HOH . ZA 9 HOH B 44 744 103 HOH HOH . ZA 9 HOH B 45 745 95 HOH HOH . ZA 9 HOH B 46 746 92 HOH HOH . ZA 9 HOH B 47 747 55 HOH HOH . ZA 9 HOH B 48 748 93 HOH HOH . ZA 9 HOH B 49 749 64 HOH HOH . ZA 9 HOH B 50 750 16 HOH HOH . ZA 9 HOH B 51 751 58 HOH HOH . ZA 9 HOH B 52 752 54 HOH HOH . ZA 9 HOH B 53 753 59 HOH HOH . ZA 9 HOH B 54 754 120 HOH HOH . ZA 9 HOH B 55 755 98 HOH HOH . ZA 9 HOH B 56 756 56 HOH HOH . ZA 9 HOH B 57 757 40 HOH HOH . ZA 9 HOH B 58 758 66 HOH HOH . ZA 9 HOH B 59 759 108 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id QA _atom_site.label_entity_id 8 _atom_site.Cartn_x -105.835 _atom_site.Cartn_y 3.314 _atom_site.Cartn_z 8.774 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 112.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 614 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #