data_6ZWM # _model_server_result.job_id HSm55wN0dbQ2_APnBJr4RQ _model_server_result.datetime_utc '2024-11-05 13:49:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zwm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":2602}' # _entry.id 6ZWM # _exptl.entry_id 6ZWM _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 660.035 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'INOSITOL HEXAKISPHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZWM _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZWM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 G N ALA 2 G ALA 2 1_555 Q C ACE . G ACE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 H N ALA 2 H ALA 2 1_555 R C ACE . H ACE 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 E NE2 HIS 1515 E HIS 1515 1_555 M ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc2 E SG CYS 1520 E CYS 1520 1_555 M ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc3 E SG CYS 1523 E CYS 1523 1_555 M ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc4 E SG CYS 1651 E CYS 1651 1_555 M ZN ZN . E ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc5 F NE2 HIS 1515 F HIS 1515 1_555 O ZN ZN . F ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc6 F SG CYS 1520 F CYS 1520 1_555 O ZN ZN . F ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc7 F SG CYS 1523 F CYS 1523 1_555 O ZN ZN . F ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc8 F SG CYS 1651 F CYS 1651 1_555 O ZN ZN . F ZN 4801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? # _chem_comp.formula 'C6 H18 O24 P6' _chem_comp.formula_weight 660.035 _chem_comp.id IHP _chem_comp.mon_nstd_flag . _chem_comp.name 'INOSITOL HEXAKISPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MYO-INOSITOL HEXAKISPHOSPHATE;INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE' # _atom_sites.entry_id 6ZWM _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 5 AGS A 1 2601 3000 AGS AGS . J 6 IHP A 1 2602 2601 IHP IHP . K 5 AGS B 1 2601 3000 AGS AGS . L 6 IHP B 1 2602 2601 IHP IHP . M 7 ZN E 1 4801 4801 ZN ZN . N 5 AGS E 1 4802 3001 AGS AGS . O 7 ZN F 1 4801 4801 ZN ZN . P 5 AGS F 1 4802 3001 AGS AGS . Q 8 ACE G 1 601 1 ACE ACE . R 8 ACE H 1 601 1 ACE ACE . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IHP . . . J 6 217.336 249.816 197.034 1 152.06 0 C1 IHP 2602 A 1 HETATM 2 C C2 IHP . . . J 6 217.599 250.327 198.459 1 152.06 0 C2 IHP 2602 A 1 HETATM 3 C C3 IHP . . . J 6 217.794 249.131 199.389 1 152.06 0 C3 IHP 2602 A 1 HETATM 4 C C4 IHP . . . J 6 219.008 248.319 198.92 1 152.06 0 C4 IHP 2602 A 1 HETATM 5 C C5 IHP . . . J 6 218.78 247.833 197.487 1 152.06 0 C5 IHP 2602 A 1 HETATM 6 C C6 IHP . . . J 6 218.545 249.019 196.551 1 152.06 0 C6 IHP 2602 A 1 HETATM 7 O O11 IHP . . . J 6 217.076 250.901 196.133 1 152.06 0 O11 IHP 2602 A 1 HETATM 8 P P1 IHP . . . J 6 215.559 251.333 195.84 1 152.06 0 P1 IHP 2602 A 1 HETATM 9 O O21 IHP . . . J 6 215.012 251.992 197.047 1 152.06 0 O21 IHP 2602 A 1 HETATM 10 O O31 IHP . . . J 6 215.736 252.448 194.698 1 152.06 -1 O31 IHP 2602 A 1 HETATM 11 O O41 IHP . . . J 6 214.846 250.177 195.258 1 152.06 0 O41 IHP 2602 A 1 HETATM 12 O O12 IHP . . . J 6 218.795 251.122 198.494 1 152.06 0 O12 IHP 2602 A 1 HETATM 13 P P2 IHP . . . J 6 218.777 252.704 198.207 1 152.06 0 P2 IHP 2602 A 1 HETATM 14 O O22 IHP . . . J 6 219.301 252.929 196.842 1 152.06 0 O22 IHP 2602 A 1 HETATM 15 O O32 IHP . . . J 6 217.447 253.238 198.569 1 152.06 -1 O32 IHP 2602 A 1 HETATM 16 O O42 IHP . . . J 6 219.856 253.251 199.264 1 152.06 0 O42 IHP 2602 A 1 HETATM 17 O O13 IHP . . . J 6 217.997 249.591 200.732 1 152.06 0 O13 IHP 2602 A 1 HETATM 18 P P3 IHP . . . J 6 216.748 250.067 201.625 1 152.06 0 P3 IHP 2602 A 1 HETATM 19 O O23 IHP . . . J 6 215.514 249.321 200.915 1 152.06 0 O23 IHP 2602 A 1 HETATM 20 O O33 IHP . . . J 6 216.575 251.527 201.451 1 152.06 -1 O33 IHP 2602 A 1 HETATM 21 O O43 IHP . . . J 6 216.901 249.513 202.986 1 152.06 0 O43 IHP 2602 A 1 HETATM 22 O O14 IHP . . . J 6 219.208 247.184 199.775 1 152.06 0 O14 IHP 2602 A 1 HETATM 23 P P4 IHP . . . J 6 220.274 247.247 200.98 1 152.06 0 P4 IHP 2602 A 1 HETATM 24 O O24 IHP . . . J 6 219.43 247.486 202.341 1 152.06 0 O24 IHP 2602 A 1 HETATM 25 O O34 IHP . . . J 6 220.905 245.764 201.121 1 152.06 -1 O34 IHP 2602 A 1 HETATM 26 O O44 IHP . . . J 6 221.327 248.275 200.79 1 152.06 0 O44 IHP 2602 A 1 HETATM 27 O O15 IHP . . . J 6 219.923 247.102 197.044 1 152.06 0 O15 IHP 2602 A 1 HETATM 28 P P5 IHP . . . J 6 219.729 245.624 196.465 1 152.06 0 P5 IHP 2602 A 1 HETATM 29 O O25 IHP . . . J 6 219.219 245.728 195.081 1 152.06 0 O25 IHP 2602 A 1 HETATM 30 O O35 IHP . . . J 6 218.56 245.042 197.401 1 152.06 -1 O35 IHP 2602 A 1 HETATM 31 O O45 IHP . . . J 6 220.963 244.859 196.73 1 152.06 0 O45 IHP 2602 A 1 HETATM 32 O O16 IHP . . . J 6 218.306 248.537 195.223 1 152.06 0 O16 IHP 2602 A 1 HETATM 33 P P6 IHP . . . J 6 219.141 249.132 193.987 1 152.06 0 P6 IHP 2602 A 1 HETATM 34 O O26 IHP . . . J 6 218.176 250.296 193.446 1 152.06 0 O26 IHP 2602 A 1 HETATM 35 O O36 IHP . . . J 6 219.237 248.084 192.945 1 152.06 -1 O36 IHP 2602 A 1 HETATM 36 O O46 IHP . . . J 6 220.382 249.742 194.51 1 152.06 0 O46 IHP 2602 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #