data_6ZXA
#
_model_server_result.job_id            D8PtmEVS_rJf5LxdFswFFQ 
_model_server_result.datetime_utc      '2024-11-15 17:38:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zxa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"JA","auth_seq_id":102}' 
#
_entry.id    6ZXA 
#
_exptl.entry_id    6ZXA 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              578.866 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            9-cis-okenone 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ZXA 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZXA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetradecameric 
_pdbx_struct_assembly.oligomeric_count      14 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 P N N 
? 4 S N N 
? 4 Z N N 
? 4 EA N N 
? 4 JA N N 
? 4 OA N N 
? 4 TA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD2 ASP 21 A ASP 21 1_555 O MG BCL . A BCL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.872 ? 
metalc ? metalc2 C OD2 ASP 21 C ASP 21 1_555 U MG BCL . C BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? 
metalc ? metalc3 E OD2 ASP 21 E ASP 21 1_555 Y MG BCL . E BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc4 G OD2 ASP 21 G ASP 21 1_555 DA MG BCL . G BCL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc5 I OD2 ASP 21 I ASP 21 1_555 IA MG BCL . I BCL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? 
metalc ? metalc6 K OD2 ASP 21 K ASP 21 1_555 NA MG BCL . K BCL 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.766 ? 
metalc ? metalc7 M OD2 ASP 21 M ASP 21 1_555 SA MG BCL . M BCL 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? 
#
_chem_comp.formula           'C41 H54 O2' 
_chem_comp.formula_weight    578.866 
_chem_comp.id                QS2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              9-cis-okenone 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C31 O25 QS2 sing 410 n n 
O25 C1 QS2 sing 411 n n 
C24 C1 QS2 sing 412 n n 
C1 C23 QS2 sing 413 n n 
C1 C2 QS2 sing 414 n n 
O32 C4 QS2 doub 415 n n 
C3 C2 QS2 sing 416 n n 
C3 C4 QS2 sing 417 n n 
C4 C5 QS2 sing 418 n n 
C5 C6 QS2 doub 419 e n 
C5 C26 QS2 sing 420 n n 
C6 C7 QS2 sing 421 n n 
C41 C38 QS2 sing 422 n n 
C7 C8 QS2 doub 423 e n 
C8 C9 QS2 sing 424 n n 
C37 C38 QS2 doub 425 n y 
C37 C36 QS2 sing 426 n y 
C10 C9 QS2 doub 427 e n 
C10 C11 QS2 sing 428 n n 
C38 C39 QS2 sing 429 n y 
C9 C27 QS2 sing 430 n n 
C29 C18 QS2 sing 431 n n 
C36 C35 QS2 doub 432 n y 
C12 C11 QS2 doub 433 e n 
C12 C13 QS2 sing 434 n n 
C14 C13 QS2 doub 435 e n 
C14 C15 QS2 sing 436 n n 
C16 C15 QS2 doub 437 e n 
C16 C17 QS2 sing 438 n n 
C13 C28 QS2 sing 439 n n 
C18 C17 QS2 doub 440 e n 
C18 C19 QS2 sing 441 n n 
C39 C42 QS2 sing 442 n n 
C39 C40 QS2 doub 443 n y 
C35 C40 QS2 sing 444 n y 
C35 C33 QS2 sing 445 n n 
C19 C20 QS2 doub 446 e n 
C20 C21 QS2 sing 447 n n 
C40 C43 QS2 sing 448 n n 
C30 C33 QS2 doub 449 e n 
C30 C22 QS2 sing 450 n n 
C21 C22 QS2 doub 451 z n 
C22 C34 QS2 sing 452 n n 
C10 H1 QS2 sing 453 n n 
C11 H2 QS2 sing 454 n n 
C12 H3 QS2 sing 455 n n 
C14 H4 QS2 sing 456 n n 
C15 H5 QS2 sing 457 n n 
C16 H6 QS2 sing 458 n n 
C17 H7 QS2 sing 459 n n 
C19 H8 QS2 sing 460 n n 
C2 H9 QS2 sing 461 n n 
C2 H10 QS2 sing 462 n n 
C20 H11 QS2 sing 463 n n 
C21 H12 QS2 sing 464 n n 
C23 H13 QS2 sing 465 n n 
C23 H14 QS2 sing 466 n n 
C23 H15 QS2 sing 467 n n 
C24 H16 QS2 sing 468 n n 
C24 H17 QS2 sing 469 n n 
C24 H18 QS2 sing 470 n n 
C26 H19 QS2 sing 471 n n 
C26 H20 QS2 sing 472 n n 
C26 H21 QS2 sing 473 n n 
C27 H22 QS2 sing 474 n n 
C27 H23 QS2 sing 475 n n 
C27 H24 QS2 sing 476 n n 
C28 H25 QS2 sing 477 n n 
C28 H26 QS2 sing 478 n n 
C28 H27 QS2 sing 479 n n 
C29 H28 QS2 sing 480 n n 
C29 H29 QS2 sing 481 n n 
C29 H30 QS2 sing 482 n n 
C3 H31 QS2 sing 483 n n 
C3 H32 QS2 sing 484 n n 
C30 H33 QS2 sing 485 n n 
C31 H34 QS2 sing 486 n n 
C31 H35 QS2 sing 487 n n 
C31 H36 QS2 sing 488 n n 
C33 H37 QS2 sing 489 n n 
C34 H38 QS2 sing 490 n n 
C34 H39 QS2 sing 491 n n 
C34 H40 QS2 sing 492 n n 
C36 H41 QS2 sing 493 n n 
C37 H42 QS2 sing 494 n n 
C41 H43 QS2 sing 495 n n 
C41 H44 QS2 sing 496 n n 
C41 H45 QS2 sing 497 n n 
C42 H46 QS2 sing 498 n n 
C42 H47 QS2 sing 499 n n 
C42 H48 QS2 sing 500 n n 
C43 H49 QS2 sing 501 n n 
C43 H50 QS2 sing 502 n n 
C43 H51 QS2 sing 503 n n 
C6 H52 QS2 sing 504 n n 
C7 H53 QS2 sing 505 n n 
C8 H54 QS2 sing 506 n n 
#
_atom_sites.entry_id                     6ZXA 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 3 BCL A 1 101 1699 BCL BCL . 
P 4 QS2 A 1 102 1700 QS2 OK7 . 
Q 3 BCL B 1 101 1538 BCL BCL . 
R 3 BCL B 1 102 1600 BCL BCL . 
S 4 QS2 B 1 103 1700 QS2 OK7 . 
T 5 QSE C 1 101 1036 QSE OKE . 
U 3 BCL C 1 102 1699 BCL BCL . 
V 3 BCL D 1 101 1538 BCL BCL . 
W 3 BCL D 1 102 1600 BCL BCL . 
X 5 QSE E 1 101 1036 QSE OKE . 
Y 3 BCL E 1 102 1699 BCL BCL . 
Z 4 QS2 E 1 103 1700 QS2 OK7 . 
AA 5 QSE F 1 101 1036 QSE OKE . 
BA 3 BCL F 1 102 1538 BCL BCL . 
CA 3 BCL F 1 103 1600 BCL BCL . 
DA 3 BCL G 1 101 1699 BCL BCL . 
EA 4 QS2 G 1 102 1700 QS2 OK7 . 
FA 5 QSE H 1 101 1036 QSE OKE . 
GA 3 BCL H 1 102 1538 BCL BCL . 
HA 3 BCL H 1 103 1600 BCL BCL . 
IA 3 BCL I 1 101 1699 BCL BCL . 
JA 4 QS2 I 1 102 1700 QS2 OK7 . 
KA 5 QSE J 1 101 1036 QSE OKE . 
LA 3 BCL J 1 102 1538 BCL BCL . 
MA 3 BCL J 1 103 1600 BCL BCL . 
NA 3 BCL K 1 101 1699 BCL BCL . 
OA 4 QS2 K 1 102 1701 QS2 OK7 . 
PA 3 BCL L 1 101 1538 BCL BCL . 
QA 3 BCL L 1 102 1600 BCL BCL . 
RA 5 QSE M 1 101 1036 QSE OKE . 
SA 3 BCL M 1 102 1699 BCL BCL . 
TA 4 QS2 M 1 103 1700 QS2 OK7 . 
UA 5 QSE N 1 101 1036 QSE OKE . 
VA 3 BCL N 1 102 1538 BCL BCL . 
WA 3 BCL N 1 103 1600 BCL BCL . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 QS2 . . . JA 4 158.588 183.165 156.127 1 52.85 ? C1 QS2 102 I 1 
HETATM 2 C C10 QS2 . . . JA 4 159.818 191.95 159.848 1 29.92 ? C10 QS2 102 I 1 
HETATM 3 C C11 QS2 . . . JA 4 160.174 193.128 160.541 1 29.41 ? C11 QS2 102 I 1 
HETATM 4 C C12 QS2 . . . JA 4 161.314 193.78 160.316 1 31.31 ? C12 QS2 102 I 1 
HETATM 5 C C13 QS2 . . . JA 4 161.77 194.983 160.981 1 33.49 ? C13 QS2 102 I 1 
HETATM 6 C C14 QS2 . . . JA 4 162.993 195.478 160.682 1 34.43 ? C14 QS2 102 I 1 
HETATM 7 C C15 QS2 . . . JA 4 163.641 196.6 161.27 1 34.38 ? C15 QS2 102 I 1 
HETATM 8 C C16 QS2 . . . JA 4 164.877 197.011 160.925 1 35.96 ? C16 QS2 102 I 1 
HETATM 9 C C17 QS2 . . . JA 4 165.531 198.122 161.533 1 40.11 ? C17 QS2 102 I 1 
HETATM 10 C C18 QS2 . . . JA 4 166.776 198.591 161.276 1 46.59 ? C18 QS2 102 I 1 
HETATM 11 C C19 QS2 . . . JA 4 167.305 199.663 162.097 1 54.43 ? C19 QS2 102 I 1 
HETATM 12 C C2 QS2 . . . JA 4 157.392 183.365 157.06 1 63.12 ? C2 QS2 102 I 1 
HETATM 13 C C20 QS2 . . . JA 4 168.55 200.148 162.098 1 59.64 ? C20 QS2 102 I 1 
HETATM 14 C C21 QS2 . . . JA 4 168.96 201.193 162.977 1 67.4 ? C21 QS2 102 I 1 
HETATM 15 C C22 QS2 . . . JA 4 170.189 201.748 163.096 1 77.74 ? C22 QS2 102 I 1 
HETATM 16 C C23 QS2 . . . JA 4 159.905 183.301 156.869 1 50.34 ? C23 QS2 102 I 1 
HETATM 17 C C24 QS2 . . . JA 4 158.516 181.836 155.402 1 49.69 ? C24 QS2 102 I 1 
HETATM 18 C C26 QS2 . . . JA 4 155.494 186.812 158.764 1 26.35 ? C26 QS2 102 I 1 
HETATM 19 C C27 QS2 . . . JA 4 157.595 191.553 160.951 1 26.58 ? C27 QS2 102 I 1 
HETATM 20 C C28 QS2 . . . JA 4 160.869 195.595 162.016 1 26.62 ? C28 QS2 102 I 1 
HETATM 21 C C29 QS2 . . . JA 4 167.675 197.994 160.232 1 41.49 ? C29 QS2 102 I 1 
HETATM 22 C C3 QS2 . . . JA 4 156.636 184.696 156.977 1 40.08 ? C3 QS2 102 I 1 
HETATM 23 C C30 QS2 . . . JA 4 171.277 201.269 162.264 1 88.29 ? C30 QS2 102 I 1 
HETATM 24 C C31 QS2 . . . JA 4 159.624 184.477 154.407 1 37.39 ? C31 QS2 102 I 1 
HETATM 25 C C33 QS2 . . . JA 4 172.529 201.638 162.517 1 105.19 ? C33 QS2 102 I 1 
HETATM 26 C C34 QS2 . . . JA 4 170.49 202.843 164.079 1 86.09 ? C34 QS2 102 I 1 
HETATM 27 C C35 QS2 . . . JA 4 173.698 201.542 161.636 1 126.91 ? C35 QS2 102 I 1 
HETATM 28 C C36 QS2 . . . JA 4 173.532 201.431 160.254 1 125.56 ? C36 QS2 102 I 1 
HETATM 29 C C37 QS2 . . . JA 4 174.62 201.473 159.407 1 127.95 ? C37 QS2 102 I 1 
HETATM 30 C C38 QS2 . . . JA 4 175.911 201.621 159.898 1 144.63 ? C38 QS2 102 I 1 
HETATM 31 C C39 QS2 . . . JA 4 176.109 201.708 161.284 1 138.92 ? C39 QS2 102 I 1 
HETATM 32 C C4 QS2 . . . JA 4 157.44 185.916 157.329 1 40.66 ? C4 QS2 102 I 1 
HETATM 33 C C40 QS2 . . . JA 4 175.012 201.658 162.16 1 134.05 ? C40 QS2 102 I 1 
HETATM 34 C C41 QS2 . . . JA 4 177.072 201.696 158.94 1 157.7 ? C41 QS2 102 I 1 
HETATM 35 C C42 QS2 . . . JA 4 177.505 201.883 161.826 1 144.41 ? C42 QS2 102 I 1 
HETATM 36 C C43 QS2 . . . JA 4 175.235 201.708 163.651 1 132.68 ? C43 QS2 102 I 1 
HETATM 37 C C5 QS2 . . . JA 4 156.876 186.977 158.207 1 33.85 ? C5 QS2 102 I 1 
HETATM 38 C C6 QS2 . . . JA 4 157.693 187.981 158.417 1 26.15 ? C6 QS2 102 I 1 
HETATM 39 C C7 QS2 . . . JA 4 157.573 189.116 159.221 1 24.51 ? C7 QS2 102 I 1 
HETATM 40 C C8 QS2 . . . JA 4 158.58 189.986 159.234 1 26.4 ? C8 QS2 102 I 1 
HETATM 41 C C9 QS2 . . . JA 4 158.699 191.206 159.996 1 25.79 ? C9 QS2 102 I 1 
HETATM 42 O O25 QS2 . . . JA 4 158.456 184.164 155.163 1 45.74 ? O25 QS2 102 I 1 
HETATM 43 O O32 QS2 . . . JA 4 158.569 186.075 156.904 1 64.43 ? O32 QS2 102 I 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#