data_6ZZC # _model_server_result.job_id JeHGYNzRYLDgsUo8QOEDkw _model_server_result.datetime_utc '2025-01-09 15:32:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zzc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":301}' # _entry.id 6ZZC # _exptl.entry_id 6ZZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.903 _cell.angle_gamma 90 _cell.entry_id 6ZZC _cell.length_a 153.421 _cell.length_b 123.171 _cell.length_c 73.126 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 ? tetrameric 4 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,H,I,K,L 1 1 C,F,G,J,M 2 1 C,F,G,J,M 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 179 A CYS 178 1_555 B SG CYS 179 B000 CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf2 A SG CYS 203 A CYS 202 1_555 B SG CYS 203 B000 CYS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf3 C SG CYS 179 C CYS 178 1_555 C SG CYS 179 C CYS 178 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 6ZZC _atom_sites.fract_transf_matrix[1][1] 0.006518 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002106 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008119 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014371 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 12P C 1 301 1 12P 12P . H 4 HOH A 1 301 1 HOH HOH . H 4 HOH A 2 302 54 HOH HOH . H 4 HOH A 3 303 58 HOH HOH . H 4 HOH A 4 304 3 HOH HOH . H 4 HOH A 5 305 53 HOH HOH . H 4 HOH A 6 306 4 HOH HOH . H 4 HOH A 7 307 35 HOH HOH . H 4 HOH A 8 308 37 HOH HOH . H 4 HOH A 9 309 2 HOH HOH . I 4 HOH B000 1 301 10 HOH HOH . I 4 HOH B000 2 302 9 HOH HOH . I 4 HOH B000 3 303 11 HOH HOH . I 4 HOH B000 4 304 7 HOH HOH . I 4 HOH B000 5 305 5 HOH HOH . I 4 HOH B000 6 306 40 HOH HOH . I 4 HOH B000 7 307 41 HOH HOH . I 4 HOH B000 8 308 56 HOH HOH . I 4 HOH B000 9 309 14 HOH HOH . I 4 HOH B000 10 310 12 HOH HOH . I 4 HOH B000 11 311 39 HOH HOH . I 4 HOH B000 12 312 8 HOH HOH . I 4 HOH B000 13 313 38 HOH HOH . I 4 HOH B000 14 314 13 HOH HOH . J 4 HOH C 1 401 44 HOH HOH . J 4 HOH C 2 402 26 HOH HOH . J 4 HOH C 3 403 51 HOH HOH . J 4 HOH C 4 404 22 HOH HOH . J 4 HOH C 5 405 24 HOH HOH . J 4 HOH C 6 406 36 HOH HOH . J 4 HOH C 7 407 27 HOH HOH . J 4 HOH C 8 408 50 HOH HOH . J 4 HOH C 9 409 23 HOH HOH . J 4 HOH C 10 410 49 HOH HOH . J 4 HOH C 11 411 16 HOH HOH . J 4 HOH C 12 412 48 HOH HOH . J 4 HOH C 13 413 43 HOH HOH . J 4 HOH C 14 414 57 HOH HOH . J 4 HOH C 15 415 20 HOH HOH . J 4 HOH C 16 416 28 HOH HOH . J 4 HOH C 17 417 17 HOH HOH . J 4 HOH C 18 418 25 HOH HOH . J 4 HOH C 19 419 19 HOH HOH . J 4 HOH C 20 420 18 HOH HOH . J 4 HOH C 21 421 34 HOH HOH . J 4 HOH C 22 422 21 HOH HOH . J 4 HOH C 23 423 45 HOH HOH . J 4 HOH C 24 424 15 HOH HOH . K 4 HOH D 1 101 30 HOH HOH . K 4 HOH D 2 102 29 HOH HOH . K 4 HOH D 3 103 46 HOH HOH . L 4 HOH D0A0 1 101 59 HOH HOH . L 4 HOH D0A0 2 102 31 HOH HOH . M 4 HOH F 1 101 47 HOH HOH . M 4 HOH F 2 102 32 HOH HOH . M 4 HOH F 3 103 52 HOH HOH . M 4 HOH F 4 104 55 HOH HOH . M 4 HOH F 5 105 33 HOH HOH . M 4 HOH F 6 106 60 HOH HOH . M 4 HOH F 7 107 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O37 12P . . . G 3 7.858 -18.017 -11.566 1 127.68 ? O37 12P 301 C 1 HETATM 2 C C36 12P . . . G 3 6.831 -17.482 -10.775 1 129.55 ? C36 12P 301 C 1 HETATM 3 C C35 12P . . . G 3 6.327 -18.544 -9.799 1 144.21 ? C35 12P 301 C 1 HETATM 4 O O34 12P . . . G 3 5.57 -19.5 -10.487 1 157.54 ? O34 12P 301 C 1 HETATM 5 C C33 12P . . . G 3 6.054 -20.808 -10.375 1 153.83 ? C33 12P 301 C 1 HETATM 6 C C32 12P . . . G 3 5.377 -21.512 -9.201 1 140.76 ? C32 12P 301 C 1 HETATM 7 O O31 12P . . . G 3 5.442 -22.897 -9.388 1 141.54 ? O31 12P 301 C 1 HETATM 8 C C30 12P . . . G 3 6.746 -23.406 -9.367 1 141.74 ? C30 12P 301 C 1 HETATM 9 C C29 12P . . . G 3 6.777 -24.731 -8.607 1 140.12 ? C29 12P 301 C 1 HETATM 10 O O28 12P . . . G 3 5.839 -25.62 -9.145 1 140.79 ? O28 12P 301 C 1 HETATM 11 C C27 12P . . . G 3 6.28 -26.279 -10.298 1 136.1 ? C27 12P 301 C 1 HETATM 12 C C26 12P . . . G 3 6.085 -27.784 -10.128 1 139.65 ? C26 12P 301 C 1 HETATM 13 O O25 12P . . . G 3 4.733 -28.072 -9.911 1 144.14 ? O25 12P 301 C 1 HETATM 14 C C24 12P . . . G 3 4.437 -29.438 -9.963 1 142.15 ? C24 12P 301 C 1 HETATM 15 C C23 12P . . . G 3 5.016 -30.139 -8.735 1 137.33 ? C23 12P 301 C 1 HETATM 16 O O22 12P . . . G 3 4.437 -31.405 -8.615 1 130.48 ? O22 12P 301 C 1 HETATM 17 C C21 12P . . . G 3 3.111 -31.384 -8.171 1 131.04 ? C21 12P 301 C 1 HETATM 18 C C20 12P . . . G 3 2.931 -32.463 -7.105 1 127.14 ? C20 12P 301 C 1 HETATM 19 O O19 12P . . . G 3 1.679 -33.072 -7.237 1 130.19 ? O19 12P 301 C 1 HETATM 20 C C18 12P . . . G 3 1.566 -33.974 -8.307 1 140.35 ? C18 12P 301 C 1 HETATM 21 C C17 12P . . . G 3 2.774 -34.911 -8.379 1 138.13 ? C17 12P 301 C 1 HETATM 22 O O16 12P . . . G 3 2.348 -36.225 -8.598 1 128.98 ? O16 12P 301 C 1 HETATM 23 C C15 12P . . . G 3 2.562 -37.066 -7.503 1 127.77 ? C15 12P 301 C 1 HETATM 24 C C14 12P . . . G 3 1.24 -37.336 -6.793 1 131.88 ? C14 12P 301 C 1 HETATM 25 O O13 12P . . . G 3 0.371 -38.06 -7.62 1 142.97 ? O13 12P 301 C 1 HETATM 26 C C12 12P . . . G 3 0.922 -39.239 -8.136 1 150.36 ? C12 12P 301 C 1 HETATM 27 C C11 12P . . . G 3 0.039 -40.43 -7.77 1 150.52 ? C11 12P 301 C 1 HETATM 28 O O10 12P . . . G 3 0.831 -41.579 -7.649 1 147.64 ? O10 12P 301 C 1 HETATM 29 C C9 12P . . . G 3 1.349 -41.795 -6.364 1 147.56 ? C9 12P 301 C 1 HETATM 30 C C8 12P . . . G 3 0.214 -42.094 -5.386 1 150.14 ? C8 12P 301 C 1 HETATM 31 O O7 12P . . . G 3 0.134 -43.473 -5.156 1 153.36 ? O7 12P 301 C 1 HETATM 32 C C6 12P . . . G 3 -1.021 -44.083 -5.662 1 154.3 ? C6 12P 301 C 1 HETATM 33 C C5 12P . . . G 3 -1.499 -45.217 -4.748 1 157.34 ? C5 12P 301 C 1 HETATM 34 O O4 12P . . . G 3 -0.442 -45.998 -4.255 1 160.42 ? O4 12P 301 C 1 HETATM 35 C C3 12P . . . G 3 0.397 -46.579 -5.217 1 162.89 ? C3 12P 301 C 1 HETATM 36 C C2 12P . . . G 3 -0.392 -47.52 -6.122 1 168.78 ? C2 12P 301 C 1 HETATM 37 O O1 12P . . . G 3 -0.634 -46.876 -7.343 1 176.29 ? O1 12P 301 C 1 # _model_server_stats.io_time_ms 125 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 37 #