data_7A0F
#
_model_server_result.job_id            aIsdCHhkEGMga-MW56zH1Q 
_model_server_result.datetime_utc      '2024-11-23 05:36:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7a0f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    7A0F 
#
_exptl.entry_id    7A0F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7A0F 
_cell.length_a            58.069 
_cell.length_b            101.498 
_cell.length_c            142.075 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7A0F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 28 HHH CYS 28 1_555 A SG CYS 44 HHH CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 119 HHH CYS 119 1_555 C SG CYS 22 LLL CYS 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf3 A SG CYS 173 HHH CYS 173 1_555 A SG CYS 187 HHH CYS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 A SG CYS 201 HHH CYS 201 1_555 A SG CYS 231 HHH CYS 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
disulf ? disulf5 B SG CYS 6 III CYS 6 1_555 B SG CYS 14 III CYS 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf6 B SG CYS 16 III CYS 16 1_555 B SG CYS 28 III CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
covale ? covale1 A ND2 ASN 53 HHH ASN 53 1_555 D C1 NAG . HHH NAG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
covale ? covale2 B SE SEC 22 III SEC 22 1_555 B SE SEC 39 III SEC 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? 
metalc ? metalc1 A O ARG 233 HHH ARG 233 1_555 E NA NA . HHH NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.594 ? 
metalc ? metalc2 A O LYS 236 HHH LYS 236 1_555 E NA NA . HHH NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? 
metalc ? metalc3 E NA NA . HHH NA 302 1_555 F O HOH . HHH HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc4 E NA NA . HHH NA 302 1_555 F O HOH . HHH HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc5 E NA NA . HHH NA 302 1_555 F O HOH . HHH HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7A0F 
_atom_sites.fract_transf_matrix[1][1]    0.017221 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009852 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NAG HHH 1 301 262 NAG NAG . 
E 5 NA HHH 1 302 1 NA NA . 
F 6 HOH HHH 1 401 120 HOH HOH . 
F 6 HOH HHH 2 402 90 HOH HOH . 
F 6 HOH HHH 3 403 37 HOH HOH . 
F 6 HOH HHH 4 404 96 HOH HOH . 
F 6 HOH HHH 5 405 113 HOH HOH . 
F 6 HOH HHH 6 406 118 HOH HOH . 
F 6 HOH HHH 7 407 121 HOH HOH . 
F 6 HOH HHH 8 408 162 HOH HOH . 
F 6 HOH HHH 9 409 127 HOH HOH . 
F 6 HOH HHH 10 410 169 HOH HOH . 
F 6 HOH HHH 11 411 154 HOH HOH . 
F 6 HOH HHH 12 412 116 HOH HOH . 
F 6 HOH HHH 13 413 163 HOH HOH . 
F 6 HOH HHH 14 414 161 HOH HOH . 
F 6 HOH HHH 15 415 156 HOH HOH . 
F 6 HOH HHH 16 416 159 HOH HOH . 
F 6 HOH HHH 17 417 129 HOH HOH . 
F 6 HOH HHH 18 418 29 HOH HOH . 
F 6 HOH HHH 19 419 123 HOH HOH . 
F 6 HOH HHH 20 420 99 HOH HOH . 
F 6 HOH HHH 21 421 160 HOH HOH . 
F 6 HOH HHH 22 422 60 HOH HOH . 
F 6 HOH HHH 23 423 171 HOH HOH . 
F 6 HOH HHH 24 424 75 HOH HOH . 
F 6 HOH HHH 25 425 119 HOH HOH . 
F 6 HOH HHH 26 426 157 HOH HOH . 
F 6 HOH HHH 27 427 168 HOH HOH . 
F 6 HOH HHH 28 428 124 HOH HOH . 
F 6 HOH HHH 29 429 178 HOH HOH . 
F 6 HOH HHH 30 430 140 HOH HOH . 
F 6 HOH HHH 31 431 158 HOH HOH . 
F 6 HOH HHH 32 432 130 HOH HOH . 
F 6 HOH HHH 33 433 91 HOH HOH . 
F 6 HOH HHH 34 434 27 HOH HOH . 
F 6 HOH HHH 35 435 170 HOH HOH . 
F 6 HOH HHH 36 436 142 HOH HOH . 
F 6 HOH HHH 37 437 182 HOH HOH . 
F 6 HOH HHH 38 438 143 HOH HOH . 
F 6 HOH HHH 39 439 151 HOH HOH . 
F 6 HOH HHH 40 440 177 HOH HOH . 
F 6 HOH HHH 41 441 6 HOH HOH . 
F 6 HOH HHH 42 442 172 HOH HOH . 
F 6 HOH HHH 43 443 144 HOH HOH . 
F 6 HOH HHH 44 444 146 HOH HOH . 
F 6 HOH HHH 45 445 128 HOH HOH . 
F 6 HOH HHH 46 446 136 HOH HOH . 
F 6 HOH HHH 47 447 134 HOH HOH . 
F 6 HOH HHH 48 448 176 HOH HOH . 
F 6 HOH HHH 49 449 135 HOH HOH . 
F 6 HOH HHH 50 450 45 HOH HOH . 
F 6 HOH HHH 51 451 133 HOH HOH . 
F 6 HOH HHH 52 452 132 HOH HOH . 
F 6 HOH HHH 53 453 141 HOH HOH . 
F 6 HOH HHH 54 454 164 HOH HOH . 
F 6 HOH HHH 55 455 137 HOH HOH . 
F 6 HOH HHH 56 456 138 HOH HOH . 
G 6 HOH III 1 101 180 HOH HOH . 
G 6 HOH III 2 102 44 HOH HOH . 
G 6 HOH III 3 103 111 HOH HOH . 
G 6 HOH III 4 104 20 HOH HOH . 
G 6 HOH III 5 105 114 HOH HOH . 
G 6 HOH III 6 106 152 HOH HOH . 
G 6 HOH III 7 107 173 HOH HOH . 
G 6 HOH III 8 108 155 HOH HOH . 
G 6 HOH III 9 109 179 HOH HOH . 
G 6 HOH III 10 110 181 HOH HOH . 
G 6 HOH III 11 111 150 HOH HOH . 
G 6 HOH III 12 112 165 HOH HOH . 
G 6 HOH III 13 113 166 HOH HOH . 
H 6 HOH LLL 1 101 167 HOH HOH . 
H 6 HOH LLL 2 102 147 HOH HOH . 
H 6 HOH LLL 3 103 28 HOH HOH . 
H 6 HOH LLL 4 104 174 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 4 25.234 25.117 142.854 1 81.29 ? C1 NAG 301 HHH 1 
HETATM 2 C C2 NAG . . . D 4 25.989 24.563 144.08 1 82.72 ? C2 NAG 301 HHH 1 
HETATM 3 C C3 NAG . . . D 4 25.168 24.837 145.337 1 85.41 ? C3 NAG 301 HHH 1 
HETATM 4 C C4 NAG . . . D 4 25.412 26.324 145.59 1 86.59 ? C4 NAG 301 HHH 1 
HETATM 5 C C5 NAG . . . D 4 24.922 27.16 144.38 1 82.43 ? C5 NAG 301 HHH 1 
HETATM 6 C C6 NAG . . . D 4 25.726 28.452 144.272 1 79.09 ? C6 NAG 301 HHH 1 
HETATM 7 C C7 NAG . . . D 4 25.764 22.154 143.534 1 67.73 ? C7 NAG 301 HHH 1 
HETATM 8 C C8 NAG . . . D 4 26.517 20.849 143.323 1 57.95 ? C8 NAG 301 HHH 1 
HETATM 9 N N2 NAG . . . D 4 26.491 23.19 143.949 1 74.66 ? N2 NAG 301 HHH 1 
HETATM 10 O O3 NAG . . . D 4 25.577 24.032 146.451 1 83.34 ? O3 NAG 301 HHH 1 
HETATM 11 O O4 NAG . . . D 4 24.854 26.739 146.863 1 82.76 ? O4 NAG 301 HHH 1 
HETATM 12 O O5 NAG . . . D 4 24.988 26.535 143.067 1 81.75 ? O5 NAG 301 HHH 1 
HETATM 13 O O6 NAG . . . D 4 25.163 29.276 143.244 1 80.65 ? O6 NAG 301 HHH 1 
HETATM 14 O O7 NAG . . . D 4 24.555 22.304 143.353 1 60.02 ? O7 NAG 301 HHH 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#