data_7A0Y # _model_server_result.job_id vrvj3FL-BKucjbPLXpl8rg _model_server_result.datetime_utc '2024-11-24 08:03:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":505}' # _entry.id 7A0Y # _exptl.entry_id 7A0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.076 _cell.angle_gamma 90 _cell.entry_id 7A0Y _cell.length_a 112.036 _cell.length_b 91.681 _cell.length_c 138.287 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA hexameric 6 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,N,O,T 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 2 1 C,D,P,Q,R,U,V 3 1 E,F,S,W,X 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 J N N ? 7 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 C SG CYS 149 C CYS 149 1_555 C SG CYS 205 C CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 D SG CYS 20 D CYS 20 1_555 D SG CYS 83 D CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 D SG CYS 130 D CYS 130 1_555 D SG CYS 190 D CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 E SG CYS 22 E CYS 22 1_555 E SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 E SG CYS 149 E CYS 149 1_555 E SG CYS 205 E CYS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf7 F SG CYS 20 F CYS 20 1_555 F SG CYS 83 F CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf8 F SG CYS 130 F CYS 130 1_555 F SG CYS 190 F CYS 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 748 n n O1 HO1 PG4 sing 749 n n C1 C2 PG4 sing 750 n n C1 H11 PG4 sing 751 n n C1 H12 PG4 sing 752 n n C2 O2 PG4 sing 753 n n C2 H21 PG4 sing 754 n n C2 H22 PG4 sing 755 n n O2 C3 PG4 sing 756 n n C3 C4 PG4 sing 757 n n C3 H31 PG4 sing 758 n n C3 H32 PG4 sing 759 n n C4 O3 PG4 sing 760 n n C4 H41 PG4 sing 761 n n C4 H42 PG4 sing 762 n n O3 C5 PG4 sing 763 n n C5 C6 PG4 sing 764 n n C5 H51 PG4 sing 765 n n C5 H52 PG4 sing 766 n n C6 O4 PG4 sing 767 n n C6 H61 PG4 sing 768 n n C6 H62 PG4 sing 769 n n O4 C7 PG4 sing 770 n n C7 C8 PG4 sing 771 n n C7 H71 PG4 sing 772 n n C7 H72 PG4 sing 773 n n C8 O5 PG4 sing 774 n n C8 H81 PG4 sing 775 n n C8 H82 PG4 sing 776 n n O5 HO5 PG4 sing 777 n n # _atom_sites.entry_id 7A0Y _atom_sites.fract_transf_matrix[1][1] 0.008926 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003262 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010907 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007699 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CDL A 1 501 1 CDL CDL . H 5 3PH A 1 502 2 3PH 3PH . I 6 PO4 A 1 503 2 PO4 PO4 . J 7 PG4 A 1 504 2 PG4 PG4 . K 8 3PE B 1 501 1 3PE 3PE . L 5 3PH B 1 502 1 3PH 3PH . M 5 3PH B 1 503 3 3PH 3PH . N 6 PO4 B 1 504 1 PO4 PO4 . O 7 PG4 B 1 505 1 PG4 PG4 . P 9 CL C 1 301 1 CL CL . Q 9 CL C 1 302 2 CL CL . R 9 CL C 1 303 3 CL CL . S 9 CL E 1 301 4 CL CL . T 10 HOH A 1 601 117 HOH HOH . T 10 HOH A 2 602 183 HOH HOH . T 10 HOH A 3 603 104 HOH HOH . T 10 HOH A 4 604 176 HOH HOH . T 10 HOH A 5 605 118 HOH HOH . T 10 HOH A 6 606 181 HOH HOH . T 10 HOH A 7 607 49 HOH HOH . T 10 HOH A 8 608 43 HOH HOH . T 10 HOH A 9 609 184 HOH HOH . T 10 HOH A 10 610 47 HOH HOH . U 10 HOH C 1 401 102 HOH HOH . U 10 HOH C 2 402 116 HOH HOH . U 10 HOH C 3 403 126 HOH HOH . U 10 HOH C 4 404 101 HOH HOH . U 10 HOH C 5 405 15 HOH HOH . U 10 HOH C 6 406 95 HOH HOH . U 10 HOH C 7 407 63 HOH HOH . U 10 HOH C 8 408 190 HOH HOH . U 10 HOH C 9 409 70 HOH HOH . U 10 HOH C 10 410 64 HOH HOH . U 10 HOH C 11 411 168 HOH HOH . U 10 HOH C 12 412 61 HOH HOH . U 10 HOH C 13 413 25 HOH HOH . U 10 HOH C 14 414 146 HOH HOH . U 10 HOH C 15 415 172 HOH HOH . U 10 HOH C 16 416 4 HOH HOH . U 10 HOH C 17 417 125 HOH HOH . U 10 HOH C 18 418 170 HOH HOH . U 10 HOH C 19 419 171 HOH HOH . U 10 HOH C 20 420 145 HOH HOH . U 10 HOH C 21 421 162 HOH HOH . U 10 HOH C 22 422 169 HOH HOH . U 10 HOH C 23 423 134 HOH HOH . U 10 HOH C 24 424 187 HOH HOH . U 10 HOH C 25 425 38 HOH HOH . U 10 HOH C 26 426 186 HOH HOH . U 10 HOH C 27 427 97 HOH HOH . U 10 HOH C 28 428 96 HOH HOH . U 10 HOH C 29 429 188 HOH HOH . U 10 HOH C 30 430 192 HOH HOH . U 10 HOH C 31 431 193 HOH HOH . V 10 HOH D 1 301 111 HOH HOH . V 10 HOH D 2 302 20 HOH HOH . V 10 HOH D 3 303 179 HOH HOH . V 10 HOH D 4 304 59 HOH HOH . V 10 HOH D 5 305 42 HOH HOH . V 10 HOH D 6 306 106 HOH HOH . V 10 HOH D 7 307 37 HOH HOH . V 10 HOH D 8 308 51 HOH HOH . V 10 HOH D 9 309 26 HOH HOH . V 10 HOH D 10 310 11 HOH HOH . V 10 HOH D 11 311 113 HOH HOH . V 10 HOH D 12 312 30 HOH HOH . V 10 HOH D 13 313 148 HOH HOH . V 10 HOH D 14 314 151 HOH HOH . V 10 HOH D 15 315 158 HOH HOH . V 10 HOH D 16 316 112 HOH HOH . V 10 HOH D 17 317 167 HOH HOH . V 10 HOH D 18 318 110 HOH HOH . V 10 HOH D 19 319 74 HOH HOH . V 10 HOH D 20 320 34 HOH HOH . V 10 HOH D 21 321 142 HOH HOH . V 10 HOH D 22 322 174 HOH HOH . V 10 HOH D 23 323 157 HOH HOH . V 10 HOH D 24 324 83 HOH HOH . V 10 HOH D 25 325 175 HOH HOH . V 10 HOH D 26 326 23 HOH HOH . V 10 HOH D 27 327 128 HOH HOH . V 10 HOH D 28 328 122 HOH HOH . W 10 HOH E 1 401 139 HOH HOH . W 10 HOH E 2 402 173 HOH HOH . W 10 HOH E 3 403 152 HOH HOH . W 10 HOH E 4 404 7 HOH HOH . W 10 HOH E 5 405 189 HOH HOH . W 10 HOH E 6 406 105 HOH HOH . W 10 HOH E 7 407 138 HOH HOH . W 10 HOH E 8 408 131 HOH HOH . W 10 HOH E 9 409 72 HOH HOH . W 10 HOH E 10 410 182 HOH HOH . W 10 HOH E 11 411 98 HOH HOH . W 10 HOH E 12 412 140 HOH HOH . W 10 HOH E 13 413 77 HOH HOH . W 10 HOH E 14 414 3 HOH HOH . W 10 HOH E 15 415 130 HOH HOH . W 10 HOH E 16 416 99 HOH HOH . W 10 HOH E 17 417 10 HOH HOH . W 10 HOH E 18 418 17 HOH HOH . W 10 HOH E 19 419 141 HOH HOH . W 10 HOH E 20 420 119 HOH HOH . W 10 HOH E 21 421 48 HOH HOH . W 10 HOH E 22 422 149 HOH HOH . W 10 HOH E 23 423 103 HOH HOH . W 10 HOH E 24 424 123 HOH HOH . W 10 HOH E 25 425 18 HOH HOH . W 10 HOH E 26 426 1 HOH HOH . W 10 HOH E 27 427 124 HOH HOH . W 10 HOH E 28 428 107 HOH HOH . W 10 HOH E 29 429 80 HOH HOH . W 10 HOH E 30 430 87 HOH HOH . W 10 HOH E 31 431 5 HOH HOH . W 10 HOH E 32 432 114 HOH HOH . W 10 HOH E 33 433 153 HOH HOH . W 10 HOH E 34 434 180 HOH HOH . W 10 HOH E 35 435 93 HOH HOH . W 10 HOH E 36 436 160 HOH HOH . W 10 HOH E 37 437 178 HOH HOH . W 10 HOH E 38 438 177 HOH HOH . W 10 HOH E 39 439 165 HOH HOH . W 10 HOH E 40 440 14 HOH HOH . W 10 HOH E 41 441 164 HOH HOH . W 10 HOH E 42 442 120 HOH HOH . W 10 HOH E 43 443 191 HOH HOH . W 10 HOH E 44 444 163 HOH HOH . W 10 HOH E 45 445 55 HOH HOH . W 10 HOH E 46 446 135 HOH HOH . W 10 HOH E 47 447 194 HOH HOH . W 10 HOH E 48 448 155 HOH HOH . X 10 HOH F 1 301 9 HOH HOH . X 10 HOH F 2 302 137 HOH HOH . X 10 HOH F 3 303 67 HOH HOH . X 10 HOH F 4 304 133 HOH HOH . X 10 HOH F 5 305 147 HOH HOH . X 10 HOH F 6 306 108 HOH HOH . X 10 HOH F 7 307 90 HOH HOH . X 10 HOH F 8 308 136 HOH HOH . X 10 HOH F 9 309 24 HOH HOH . X 10 HOH F 10 310 21 HOH HOH . X 10 HOH F 11 311 16 HOH HOH . X 10 HOH F 12 312 66 HOH HOH . X 10 HOH F 13 313 57 HOH HOH . X 10 HOH F 14 314 75 HOH HOH . X 10 HOH F 15 315 2 HOH HOH . X 10 HOH F 16 316 92 HOH HOH . X 10 HOH F 17 317 6 HOH HOH . X 10 HOH F 18 318 12 HOH HOH . X 10 HOH F 19 319 71 HOH HOH . X 10 HOH F 20 320 60 HOH HOH . X 10 HOH F 21 321 82 HOH HOH . X 10 HOH F 22 322 166 HOH HOH . X 10 HOH F 23 323 36 HOH HOH . X 10 HOH F 24 324 81 HOH HOH . X 10 HOH F 25 325 91 HOH HOH . X 10 HOH F 26 326 159 HOH HOH . X 10 HOH F 27 327 13 HOH HOH . X 10 HOH F 28 328 40 HOH HOH . X 10 HOH F 29 329 132 HOH HOH . X 10 HOH F 30 330 185 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . O 7 -50.091 -1.502 30.533 1 83.14 ? O1 PG4 505 B 1 HETATM 2 C C1 PG4 . . . O 7 -48.898 -1.844 31.247 1 75.72 ? C1 PG4 505 B 1 HETATM 3 C C2 PG4 . . . O 7 -47.796 -2.207 30.259 1 79.48 ? C2 PG4 505 B 1 HETATM 4 O O2 PG4 . . . O 7 -46.632 -2.598 30.983 1 88.45 ? O2 PG4 505 B 1 HETATM 5 C C3 PG4 . . . O 7 -45.57 -3.002 30.122 1 87.52 ? C3 PG4 505 B 1 HETATM 6 C C4 PG4 . . . O 7 -44.415 -3.526 30.967 1 83.43 ? C4 PG4 505 B 1 HETATM 7 O O3 PG4 . . . O 7 -43.337 -3.908 30.116 1 91.27 ? O3 PG4 505 B 1 HETATM 8 C C5 PG4 . . . O 7 -42.265 -4.5 30.847 1 90.62 ? C5 PG4 505 B 1 HETATM 9 C C6 PG4 . . . O 7 -41.141 -4.874 29.888 1 84.74 ? C6 PG4 505 B 1 HETATM 10 O O4 PG4 . . . O 7 -40.479 -3.694 29.438 1 81.67 ? O4 PG4 505 B 1 HETATM 11 C C7 PG4 . . . O 7 -39.556 -3.979 28.389 1 83.12 ? C7 PG4 505 B 1 HETATM 12 C C8 PG4 . . . O 7 -38.7 -2.749 28.114 1 74.89 ? C8 PG4 505 B 1 HETATM 13 O O5 PG4 . . . O 7 -37.893 -2.474 29.263 1 80.03 ? O5 PG4 505 B 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #