data_7A1N
#
_model_server_result.job_id            zEjBPN8F4gYrqYwqnswN7g 
_model_server_result.datetime_utc      '2024-11-15 13:21:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7a1n 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1008}' 
#
_entry.id    7A1N 
#
_exptl.entry_id    7A1N 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              160.125 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(3~{S})-3-methyl-2-oxidanylidene-pentanedioic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7A1N 
_cell.length_a            86.052 
_cell.length_b            86.052 
_cell.length_c            147.833 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7A1N 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    'P 4abw 2nw' 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 199 A HIS 199 1_555 I ZN ZN . A ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc2 A OD2 ASP 201 A ASP 201 1_555 I ZN ZN . A ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? 
metalc ? metalc3 A NE2 HIS 279 A HIS 279 1_555 I ZN ZN . A ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc4 I ZN ZN . A ZN 1007 1_555 J O01 ROQ . A ROQ 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? 
metalc ? metalc5 I ZN ZN . A ZN 1007 1_555 J O03 ROQ . A ROQ 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
#
_chem_comp.formula           'C6 H8 O5' 
_chem_comp.formula_weight    160.125 
_chem_comp.id                ROQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(3~{S})-3-methyl-2-oxidanylidene-pentanedioic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O03 C05 ROQ doub 277 n n 
O05 C06 ROQ doub 278 n n 
O02 C05 ROQ sing 279 n n 
C05 C01 ROQ sing 280 n n 
C06 C03 ROQ sing 281 n n 
C06 O04 ROQ sing 282 n n 
C03 C02 ROQ sing 283 n n 
C01 C02 ROQ sing 284 n n 
C01 O01 ROQ doub 285 n n 
C02 C04 ROQ sing 286 n n 
C02 H01 ROQ sing 287 n n 
C03 H02 ROQ sing 288 n n 
C03 H03 ROQ sing 289 n n 
C04 H04 ROQ sing 290 n n 
C04 H05 ROQ sing 291 n n 
C04 H06 ROQ sing 292 n n 
O02 H1 ROQ sing 293 n n 
O04 H2 ROQ sing 294 n n 
#
_atom_sites.entry_id                     7A1N 
_atom_sites.fract_transf_matrix[1][1]    0.011621 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011621 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006764 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 1001 1001 SO4 SO4 . 
D 3 SO4 A 1 1002 1101 SO4 SO4 . 
E 3 SO4 A 1 1003 1201 SO4 SO4 . 
F 3 SO4 A 1 1004 1301 SO4 SO4 . 
G 3 SO4 A 1 1005 1401 SO4 SO4 . 
H 3 SO4 A 1 1006 1501 SO4 SO4 . 
I 4 ZN A 1 1007 501 ZN ZN . 
J 5 ROQ A 1 1008 401 ROQ LIG . 
K 3 SO4 A 1 1009 901 SO4 SO4 . 
L 3 SO4 A 1 1010 902 SO4 SO4 . 
M 3 SO4 A 1 1011 904 SO4 SO4 . 
N 6 HOH A 1 1101 161 HOH HOH . 
N 6 HOH A 2 1102 96 HOH HOH . 
N 6 HOH A 3 1103 108 HOH HOH . 
N 6 HOH A 4 1104 22 HOH HOH . 
N 6 HOH A 5 1105 190 HOH HOH . 
N 6 HOH A 6 1106 39 HOH HOH . 
N 6 HOH A 7 1107 35 HOH HOH . 
N 6 HOH A 8 1108 160 HOH HOH . 
N 6 HOH A 9 1109 58 HOH HOH . 
N 6 HOH A 10 1110 1 HOH HOH . 
N 6 HOH A 11 1111 55 HOH HOH . 
N 6 HOH A 12 1112 53 HOH HOH . 
N 6 HOH A 13 1113 31 HOH HOH . 
N 6 HOH A 14 1114 24 HOH HOH . 
N 6 HOH A 15 1115 52 HOH HOH . 
N 6 HOH A 16 1116 143 HOH HOH . 
N 6 HOH A 17 1117 3 HOH HOH . 
N 6 HOH A 18 1118 154 HOH HOH . 
N 6 HOH A 19 1119 70 HOH HOH . 
N 6 HOH A 20 1120 2 HOH HOH . 
N 6 HOH A 21 1121 7 HOH HOH . 
N 6 HOH A 22 1122 66 HOH HOH . 
N 6 HOH A 23 1123 62 HOH HOH . 
N 6 HOH A 24 1124 14 HOH HOH . 
N 6 HOH A 25 1125 11 HOH HOH . 
N 6 HOH A 26 1126 69 HOH HOH . 
N 6 HOH A 27 1127 8 HOH HOH . 
N 6 HOH A 28 1128 5 HOH HOH . 
N 6 HOH A 29 1129 183 HOH HOH . 
N 6 HOH A 30 1130 10 HOH HOH . 
N 6 HOH A 31 1131 99 HOH HOH . 
N 6 HOH A 32 1132 18 HOH HOH . 
N 6 HOH A 33 1133 9 HOH HOH . 
N 6 HOH A 34 1134 77 HOH HOH . 
N 6 HOH A 35 1135 25 HOH HOH . 
N 6 HOH A 36 1136 94 HOH HOH . 
N 6 HOH A 37 1137 23 HOH HOH . 
N 6 HOH A 38 1138 12 HOH HOH . 
N 6 HOH A 39 1139 121 HOH HOH . 
N 6 HOH A 40 1140 64 HOH HOH . 
N 6 HOH A 41 1141 28 HOH HOH . 
N 6 HOH A 42 1142 76 HOH HOH . 
N 6 HOH A 43 1143 60 HOH HOH . 
N 6 HOH A 44 1144 49 HOH HOH . 
N 6 HOH A 45 1145 16 HOH HOH . 
N 6 HOH A 46 1146 132 HOH HOH . 
N 6 HOH A 47 1147 13 HOH HOH . 
N 6 HOH A 48 1148 54 HOH HOH . 
N 6 HOH A 49 1149 79 HOH HOH . 
N 6 HOH A 50 1150 112 HOH HOH . 
N 6 HOH A 51 1151 21 HOH HOH . 
N 6 HOH A 52 1152 4 HOH HOH . 
N 6 HOH A 53 1153 36 HOH HOH . 
N 6 HOH A 54 1154 80 HOH HOH . 
N 6 HOH A 55 1155 20 HOH HOH . 
N 6 HOH A 56 1156 33 HOH HOH . 
N 6 HOH A 57 1157 15 HOH HOH . 
N 6 HOH A 58 1158 169 HOH HOH . 
N 6 HOH A 59 1159 19 HOH HOH . 
N 6 HOH A 60 1160 45 HOH HOH . 
N 6 HOH A 61 1161 32 HOH HOH . 
N 6 HOH A 62 1162 41 HOH HOH . 
N 6 HOH A 63 1163 29 HOH HOH . 
N 6 HOH A 64 1164 153 HOH HOH . 
N 6 HOH A 65 1165 129 HOH HOH . 
N 6 HOH A 66 1166 27 HOH HOH . 
N 6 HOH A 67 1167 51 HOH HOH . 
N 6 HOH A 68 1168 110 HOH HOH . 
N 6 HOH A 69 1169 17 HOH HOH . 
N 6 HOH A 70 1170 26 HOH HOH . 
N 6 HOH A 71 1171 44 HOH HOH . 
N 6 HOH A 72 1172 42 HOH HOH . 
N 6 HOH A 73 1173 67 HOH HOH . 
N 6 HOH A 74 1174 6 HOH HOH . 
N 6 HOH A 75 1175 81 HOH HOH . 
N 6 HOH A 76 1176 152 HOH HOH . 
N 6 HOH A 77 1177 118 HOH HOH . 
N 6 HOH A 78 1178 46 HOH HOH . 
N 6 HOH A 79 1179 68 HOH HOH . 
N 6 HOH A 80 1180 48 HOH HOH . 
N 6 HOH A 81 1181 87 HOH HOH . 
N 6 HOH A 82 1182 191 HOH HOH . 
N 6 HOH A 83 1183 37 HOH HOH . 
N 6 HOH A 84 1184 82 HOH HOH . 
N 6 HOH A 85 1185 175 HOH HOH . 
N 6 HOH A 86 1186 92 HOH HOH . 
N 6 HOH A 87 1187 63 HOH HOH . 
N 6 HOH A 88 1188 126 HOH HOH . 
N 6 HOH A 89 1189 73 HOH HOH . 
N 6 HOH A 90 1190 189 HOH HOH . 
N 6 HOH A 91 1191 130 HOH HOH . 
N 6 HOH A 92 1192 38 HOH HOH . 
N 6 HOH A 93 1193 162 HOH HOH . 
N 6 HOH A 94 1194 111 HOH HOH . 
N 6 HOH A 95 1195 56 HOH HOH . 
N 6 HOH A 96 1196 106 HOH HOH . 
N 6 HOH A 97 1197 140 HOH HOH . 
N 6 HOH A 98 1198 75 HOH HOH . 
N 6 HOH A 99 1199 34 HOH HOH . 
N 6 HOH A 100 1200 164 HOH HOH . 
N 6 HOH A 101 1201 109 HOH HOH . 
N 6 HOH A 102 1202 57 HOH HOH . 
N 6 HOH A 103 1203 193 HOH HOH . 
N 6 HOH A 104 1204 124 HOH HOH . 
N 6 HOH A 105 1205 125 HOH HOH . 
N 6 HOH A 106 1206 127 HOH HOH . 
N 6 HOH A 107 1207 134 HOH HOH . 
N 6 HOH A 108 1208 138 HOH HOH . 
N 6 HOH A 109 1209 165 HOH HOH . 
N 6 HOH A 110 1210 147 HOH HOH . 
N 6 HOH A 111 1211 196 HOH HOH . 
N 6 HOH A 112 1212 195 HOH HOH . 
N 6 HOH A 113 1213 91 HOH HOH . 
N 6 HOH A 114 1214 43 HOH HOH . 
N 6 HOH A 115 1215 142 HOH HOH . 
N 6 HOH A 116 1216 141 HOH HOH . 
N 6 HOH A 117 1217 74 HOH HOH . 
N 6 HOH A 118 1218 178 HOH HOH . 
N 6 HOH A 119 1219 148 HOH HOH . 
N 6 HOH A 120 1220 176 HOH HOH . 
N 6 HOH A 121 1221 174 HOH HOH . 
N 6 HOH A 122 1222 181 HOH HOH . 
N 6 HOH A 123 1223 170 HOH HOH . 
N 6 HOH A 124 1224 123 HOH HOH . 
N 6 HOH A 125 1225 113 HOH HOH . 
N 6 HOH A 126 1226 137 HOH HOH . 
N 6 HOH A 127 1227 198 HOH HOH . 
N 6 HOH A 128 1228 139 HOH HOH . 
N 6 HOH A 129 1229 180 HOH HOH . 
N 6 HOH A 130 1230 93 HOH HOH . 
N 6 HOH A 131 1231 146 HOH HOH . 
N 6 HOH A 132 1232 187 HOH HOH . 
N 6 HOH A 133 1233 84 HOH HOH . 
N 6 HOH A 134 1234 177 HOH HOH . 
N 6 HOH A 135 1235 166 HOH HOH . 
N 6 HOH A 136 1236 184 HOH HOH . 
N 6 HOH A 137 1237 117 HOH HOH . 
N 6 HOH A 138 1238 100 HOH HOH . 
N 6 HOH A 139 1239 122 HOH HOH . 
N 6 HOH A 140 1240 135 HOH HOH . 
N 6 HOH A 141 1241 182 HOH HOH . 
N 6 HOH A 142 1242 86 HOH HOH . 
N 6 HOH A 143 1243 88 HOH HOH . 
N 6 HOH A 144 1244 133 HOH HOH . 
N 6 HOH A 145 1245 186 HOH HOH . 
N 6 HOH A 146 1246 172 HOH HOH . 
N 6 HOH A 147 1247 90 HOH HOH . 
N 6 HOH A 148 1248 120 HOH HOH . 
N 6 HOH A 149 1249 194 HOH HOH . 
N 6 HOH A 150 1250 119 HOH HOH . 
N 6 HOH A 151 1251 107 HOH HOH . 
N 6 HOH A 152 1252 65 HOH HOH . 
N 6 HOH A 153 1253 101 HOH HOH . 
N 6 HOH A 154 1254 158 HOH HOH . 
N 6 HOH A 155 1255 197 HOH HOH . 
N 6 HOH A 156 1256 168 HOH HOH . 
N 6 HOH A 157 1257 185 HOH HOH . 
N 6 HOH A 158 1258 131 HOH HOH . 
N 6 HOH A 159 1259 102 HOH HOH . 
N 6 HOH A 160 1260 85 HOH HOH . 
N 6 HOH A 161 1261 179 HOH HOH . 
N 6 HOH A 162 1262 159 HOH HOH . 
N 6 HOH A 163 1263 151 HOH HOH . 
N 6 HOH A 164 1264 149 HOH HOH . 
N 6 HOH A 165 1265 61 HOH HOH . 
N 6 HOH A 166 1266 115 HOH HOH . 
N 6 HOH A 167 1267 89 HOH HOH . 
N 6 HOH A 168 1268 116 HOH HOH . 
N 6 HOH A 169 1269 171 HOH HOH . 
N 6 HOH A 170 1270 173 HOH HOH . 
N 6 HOH A 171 1271 167 HOH HOH . 
N 6 HOH A 172 1272 157 HOH HOH . 
O 6 HOH B 1 101 83 HOH HOH . 
O 6 HOH B 2 102 30 HOH HOH . 
O 6 HOH B 3 103 47 HOH HOH . 
O 6 HOH B 4 104 192 HOH HOH . 
O 6 HOH B 5 105 188 HOH HOH . 
O 6 HOH B 6 106 144 HOH HOH . 
O 6 HOH B 7 107 50 HOH HOH . 
O 6 HOH B 8 108 145 HOH HOH . 
O 6 HOH B 9 109 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 ROQ . . . J 5 21.168 -25.929 8.174 1 61.51 ? C01 ROQ 1008 A 1 
HETATM 2 C C02 ROQ . . . J 5 19.864 -25.433 7.641 1 74.37 ? C02 ROQ 1008 A 1 
HETATM 3 C C03 ROQ . . . J 5 18.674 -25.956 8.411 1 67.85 ? C03 ROQ 1008 A 1 
HETATM 4 C C04 ROQ . . . J 5 19.882 -25.338 6.057 1 86.4 ? C04 ROQ 1008 A 1 
HETATM 5 C C05 ROQ . . . J 5 21.947 -25.067 8.822 1 64.25 ? C05 ROQ 1008 A 1 
HETATM 6 C C06 ROQ . . . J 5 17.227 -25.362 8.167 1 66.92 ? C06 ROQ 1008 A 1 
HETATM 7 O O01 ROQ . . . J 5 21.473 -27.101 8.012 1 60.13 ? O01 ROQ 1008 A 1 
HETATM 8 O O02 ROQ . . . J 5 21.576 -23.907 9.332 1 62.12 -1 O02 ROQ 1008 A 1 
HETATM 9 O O03 ROQ . . . J 5 23.102 -25.453 8.932 1 62.56 ? O03 ROQ 1008 A 1 
HETATM 10 O O04 ROQ . . . J 5 16.978 -24.493 9.122 1 65.38 -1 O04 ROQ 1008 A 1 
HETATM 11 O O05 ROQ . . . J 5 16.498 -25.694 7.256 1 69.23 ? O05 ROQ 1008 A 1 
HETATM 12 H H01 ROQ . . . J 5 19.811 -24.499 7.897 1 89.33 ? H01 ROQ 1008 A 1 
HETATM 13 H H02 ROQ . . . J 5 18.606 -26.909 8.241 1 81.51 ? H02 ROQ 1008 A 1 
HETATM 14 H H03 ROQ . . . J 5 18.857 -25.841 9.356 1 81.51 ? H03 ROQ 1008 A 1 
HETATM 15 H H04 ROQ . . . J 5 20.693 -25.59 5.587 1 103.77 ? H04 ROQ 1008 A 1 
HETATM 16 H H05 ROQ . . . J 5 19.727 -24.476 5.642 1 103.77 ? H05 ROQ 1008 A 1 
HETATM 17 H H06 ROQ . . . J 5 19.244 -25.867 5.553 1 103.77 ? H06 ROQ 1008 A 1 
#
_model_server_stats.io_time_ms              214 
_model_server_stats.parse_time_ms           41 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           449 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           17 
#