data_7A1V # _model_server_result.job_id QhRJDQwsVkBQND-AQFHSeA _model_server_result.datetime_utc '2024-11-20 11:40:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7A1V # _exptl.entry_id 7A1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.161 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-AMINO-1-METHYLPURINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7A1V _cell.length_a 79.781 _cell.length_b 79.781 _cell.length_c 113.563 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall 'P 65' _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,L 1 1 B,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 N5 1' _chem_comp.formula_weight 150.161 _chem_comp.id M1A _chem_comp.mon_nstd_flag . _chem_comp.name 6-AMINO-1-METHYLPURINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C8 M1A sing 231 n y N9 C4 M1A sing 232 n y N9 HN9 M1A sing 233 n n C8 N7 M1A doub 234 n y C8 H8 M1A sing 235 n n N7 C5 M1A sing 236 n y C5 C6 M1A sing 237 n y C5 C4 M1A doub 238 n y C6 N6 M1A sing 239 n n C6 N1 M1A doub 240 n y N6 HN61 M1A sing 241 n n N6 HN62 M1A sing 242 n n N1 C2 M1A sing 243 n y N1 CN1 M1A sing 244 n n C2 N3 M1A doub 245 n y C2 H2 M1A sing 246 n n N3 C4 M1A sing 247 n y CN1 H11 M1A sing 248 n n CN1 H12 M1A sing 249 n n CN1 H13 M1A sing 250 n n # _atom_sites.entry_id 7A1V _atom_sites.fract_transf_matrix[1][1] 0.012534 _atom_sites.fract_transf_matrix[1][2] 0.007237 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014473 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 M1A A 1 701 701 M1A LIG . D 3 SO4 A 1 702 1 SO4 SO4 . E 3 SO4 A 1 703 4 SO4 SO4 . F 3 SO4 A 1 704 5 SO4 SO4 . G 3 SO4 A 1 705 7 SO4 SO4 . H 4 GOL B 1 701 701 GOL GOL . I 3 SO4 B 1 702 2 SO4 SO4 . J 3 SO4 B 1 703 3 SO4 SO4 . K 3 SO4 B 1 704 6 SO4 SO4 . L 5 HOH A 1 801 47 HOH HOH . L 5 HOH A 2 802 38 HOH HOH . L 5 HOH A 3 803 33 HOH HOH . L 5 HOH A 4 804 49 HOH HOH . L 5 HOH A 5 805 15 HOH HOH . L 5 HOH A 6 806 62 HOH HOH . L 5 HOH A 7 807 34 HOH HOH . L 5 HOH A 8 808 10 HOH HOH . L 5 HOH A 9 809 21 HOH HOH . L 5 HOH A 10 810 61 HOH HOH . L 5 HOH A 11 811 45 HOH HOH . L 5 HOH A 12 812 28 HOH HOH . L 5 HOH A 13 813 85 HOH HOH . L 5 HOH A 14 814 26 HOH HOH . L 5 HOH A 15 815 35 HOH HOH . L 5 HOH A 16 816 60 HOH HOH . L 5 HOH A 17 817 48 HOH HOH . L 5 HOH A 18 818 43 HOH HOH . L 5 HOH A 19 819 59 HOH HOH . L 5 HOH A 20 820 41 HOH HOH . L 5 HOH A 21 821 74 HOH HOH . L 5 HOH A 22 822 77 HOH HOH . L 5 HOH A 23 823 65 HOH HOH . L 5 HOH A 24 824 68 HOH HOH . L 5 HOH A 25 825 55 HOH HOH . L 5 HOH A 26 826 63 HOH HOH . L 5 HOH A 27 827 44 HOH HOH . L 5 HOH A 28 828 51 HOH HOH . L 5 HOH A 29 829 78 HOH HOH . L 5 HOH A 30 830 36 HOH HOH . L 5 HOH A 31 831 75 HOH HOH . L 5 HOH A 32 832 6 HOH HOH . L 5 HOH A 33 833 72 HOH HOH . L 5 HOH A 34 834 73 HOH HOH . L 5 HOH A 35 835 66 HOH HOH . L 5 HOH A 36 836 64 HOH HOH . L 5 HOH A 37 837 84 HOH HOH . L 5 HOH A 38 838 87 HOH HOH . L 5 HOH A 39 839 88 HOH HOH . L 5 HOH A 40 840 86 HOH HOH . L 5 HOH A 41 841 67 HOH HOH . L 5 HOH A 42 842 76 HOH HOH . L 5 HOH A 43 843 71 HOH HOH . M 5 HOH B 1 801 5 HOH HOH . M 5 HOH B 2 802 24 HOH HOH . M 5 HOH B 3 803 9 HOH HOH . M 5 HOH B 4 804 8 HOH HOH . M 5 HOH B 5 805 30 HOH HOH . M 5 HOH B 6 806 18 HOH HOH . M 5 HOH B 7 807 50 HOH HOH . M 5 HOH B 8 808 2 HOH HOH . M 5 HOH B 9 809 11 HOH HOH . M 5 HOH B 10 810 46 HOH HOH . M 5 HOH B 11 811 29 HOH HOH . M 5 HOH B 12 812 27 HOH HOH . M 5 HOH B 13 813 37 HOH HOH . M 5 HOH B 14 814 17 HOH HOH . M 5 HOH B 15 815 19 HOH HOH . M 5 HOH B 16 816 40 HOH HOH . M 5 HOH B 17 817 20 HOH HOH . M 5 HOH B 18 818 42 HOH HOH . M 5 HOH B 19 819 57 HOH HOH . M 5 HOH B 20 820 83 HOH HOH . M 5 HOH B 21 821 79 HOH HOH . M 5 HOH B 22 822 81 HOH HOH . M 5 HOH B 23 823 82 HOH HOH . M 5 HOH B 24 824 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 M1A . . . C 2 31.91 2.615 6.673 1 45.65 ? N9 M1A 701 A 1 HETATM 2 C C8 M1A . . . C 2 33.131 2.647 7.184 1 48.98 ? C8 M1A 701 A 1 HETATM 3 N N7 M1A . . . C 2 33.509 1.414 7.498 1 44.93 ? N7 M1A 701 A 1 HETATM 4 C C5 M1A . . . C 2 32.498 0.563 7.179 1 46.83 ? C5 M1A 701 A 1 HETATM 5 C C6 M1A . . . C 2 32.318 -0.843 7.288 1 45.26 ? C6 M1A 701 A 1 HETATM 6 N N6 M1A . . . C 2 33.357 -1.695 7.836 1 41.52 ? N6 M1A 701 A 1 HETATM 7 N N1 M1A . . . C 2 31.173 -1.367 6.876 1 48.48 ? N1 M1A 701 A 1 HETATM 8 C C2 M1A . . . C 2 30.211 -0.596 6.38 1 47.63 ? C2 M1A 701 A 1 HETATM 9 N N3 M1A . . . C 2 30.338 0.715 6.26 1 41.99 ? N3 M1A 701 A 1 HETATM 10 C C4 M1A . . . C 2 31.483 1.322 6.659 1 43.8 ? C4 M1A 701 A 1 HETATM 11 C CN1 M1A . . . C 2 30.964 -2.801 6.972 1 45.23 ? CN1 M1A 701 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #