data_7A1W # _model_server_result.job_id nIgN9b9_NM2QfAxLkDvdPg _model_server_result.datetime_utc '2024-11-02 20:22:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a1w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 7A1W # _exptl.entry_id 7A1W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 296.367 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}-[6-(phenylmethyl)-7,8-dihydro-5~{H}-pyrido[4,3-d]pyrimidin-2-yl]propanamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7A1W _cell.length_a 38.55 _cell.length_b 38.55 _cell.length_c 186.07 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A1W _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 13 A CYS 12 1_555 E C21 QWK . A QWK 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.764 ? covale ? covale2 A SG CYS 119 A CYS 118 1_555 F C21 QWK . A QWK 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? metalc ? metalc1 A OG SER 18 A SER 17 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc2 B O1B GDP . A GDP 201 1_555 C MG MG . A MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc3 C MG MG . A MG 202 1_555 G O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc4 C MG MG . A MG 202 1_555 G O HOH . A HOH 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc5 C MG MG . A MG 202 1_555 G O HOH . A HOH 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc6 C MG MG . A MG 202 1_555 G O HOH . A HOH 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? # _chem_comp.formula 'C17 H20 N4 O' _chem_comp.formula_weight 296.367 _chem_comp.id QWK _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}-[6-(phenylmethyl)-7,8-dihydro-5~{H}-pyrido[4,3-d]pyrimidin-2-yl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms RA303 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 QWK sing 326 n n C15 N7 QWK sing 327 n n C8 N7 QWK sing 328 n n C8 C9 QWK sing 329 n n C6 C5 QWK sing 330 n n C6 N7 QWK sing 331 n n C14 C9 QWK doub 332 n y C14 C13 QWK sing 333 n y C5 C4 QWK doub 334 n y C5 C17 QWK sing 335 n y C4 N3 QWK sing 336 n y C17 C16 QWK sing 337 n n C17 N18 QWK doub 338 n y N3 C2 QWK doub 339 n y N18 C2 QWK sing 340 n y C2 N1 QWK sing 341 n n O22 C19 QWK doub 342 n n N1 C19 QWK sing 343 n n C21 C20 QWK sing 344 n n C19 C20 QWK sing 345 n n C9 C10 QWK sing 346 n y C13 C12 QWK doub 347 n y C10 C11 QWK doub 348 n y C12 C11 QWK sing 349 n y C8 H1 QWK sing 350 n n C8 H2 QWK sing 351 n n C10 H3 QWK sing 352 n n C11 H4 QWK sing 353 n n C12 H5 QWK sing 354 n n C13 H6 QWK sing 355 n n C14 H7 QWK sing 356 n n C15 H8 QWK sing 357 n n C15 H9 QWK sing 358 n n C16 H10 QWK sing 359 n n C16 H11 QWK sing 360 n n C20 H12 QWK sing 361 n n C20 H13 QWK sing 362 n n C21 H14 QWK sing 363 n n C21 H15 QWK sing 364 n n C21 H16 QWK sing 365 n n N1 H17 QWK sing 366 n n C4 H18 QWK sing 367 n n C6 H19 QWK sing 368 n n C6 H20 QWK sing 369 n n # _atom_sites.entry_id 7A1W _atom_sites.fract_transf_matrix[1][1] 0.02594 _atom_sites.fract_transf_matrix[1][2] 0.014977 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.029953 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005374 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDP A 1 201 1 GDP GDP . C 3 MG A 1 202 2 MG MG . D 4 PO4 A 1 203 3 PO4 PO4 . E 5 QWK A 1 204 1 QWK INH . F 5 QWK A 1 205 2 QWK INH . G 6 HOH A 1 301 6 HOH HOH . G 6 HOH A 2 302 45 HOH HOH . G 6 HOH A 3 303 38 HOH HOH . G 6 HOH A 4 304 43 HOH HOH . G 6 HOH A 5 305 13 HOH HOH . G 6 HOH A 6 306 18 HOH HOH . G 6 HOH A 7 307 8 HOH HOH . G 6 HOH A 8 308 113 HOH HOH . G 6 HOH A 9 309 17 HOH HOH . G 6 HOH A 10 310 70 HOH HOH . G 6 HOH A 11 311 75 HOH HOH . G 6 HOH A 12 312 39 HOH HOH . G 6 HOH A 13 313 34 HOH HOH . G 6 HOH A 14 314 40 HOH HOH . G 6 HOH A 15 315 33 HOH HOH . G 6 HOH A 16 316 1 HOH HOH . G 6 HOH A 17 317 55 HOH HOH . G 6 HOH A 18 318 35 HOH HOH . G 6 HOH A 19 319 4 HOH HOH . G 6 HOH A 20 320 104 HOH HOH . G 6 HOH A 21 321 95 HOH HOH . G 6 HOH A 22 322 41 HOH HOH . G 6 HOH A 23 323 21 HOH HOH . G 6 HOH A 24 324 77 HOH HOH . G 6 HOH A 25 325 59 HOH HOH . G 6 HOH A 26 326 36 HOH HOH . G 6 HOH A 27 327 80 HOH HOH . G 6 HOH A 28 328 76 HOH HOH . G 6 HOH A 29 329 67 HOH HOH . G 6 HOH A 30 330 56 HOH HOH . G 6 HOH A 31 331 16 HOH HOH . G 6 HOH A 32 332 50 HOH HOH . G 6 HOH A 33 333 20 HOH HOH . G 6 HOH A 34 334 64 HOH HOH . G 6 HOH A 35 335 27 HOH HOH . G 6 HOH A 36 336 69 HOH HOH . G 6 HOH A 37 337 63 HOH HOH . G 6 HOH A 38 338 73 HOH HOH . G 6 HOH A 39 339 14 HOH HOH . G 6 HOH A 40 340 88 HOH HOH . G 6 HOH A 41 341 87 HOH HOH . G 6 HOH A 42 342 58 HOH HOH . G 6 HOH A 43 343 81 HOH HOH . G 6 HOH A 44 344 3 HOH HOH . G 6 HOH A 45 345 79 HOH HOH . G 6 HOH A 46 346 96 HOH HOH . G 6 HOH A 47 347 86 HOH HOH . G 6 HOH A 48 348 101 HOH HOH . G 6 HOH A 49 349 10 HOH HOH . G 6 HOH A 50 350 15 HOH HOH . G 6 HOH A 51 351 61 HOH HOH . G 6 HOH A 52 352 53 HOH HOH . G 6 HOH A 53 353 12 HOH HOH . G 6 HOH A 54 354 52 HOH HOH . G 6 HOH A 55 355 32 HOH HOH . G 6 HOH A 56 356 5 HOH HOH . G 6 HOH A 57 357 84 HOH HOH . G 6 HOH A 58 358 105 HOH HOH . G 6 HOH A 59 359 48 HOH HOH . G 6 HOH A 60 360 49 HOH HOH . G 6 HOH A 61 361 110 HOH HOH . G 6 HOH A 62 362 116 HOH HOH . G 6 HOH A 63 363 26 HOH HOH . G 6 HOH A 64 364 66 HOH HOH . G 6 HOH A 65 365 54 HOH HOH . G 6 HOH A 66 366 65 HOH HOH . G 6 HOH A 67 367 102 HOH HOH . G 6 HOH A 68 368 37 HOH HOH . G 6 HOH A 69 369 30 HOH HOH . G 6 HOH A 70 370 9 HOH HOH . G 6 HOH A 71 371 42 HOH HOH . G 6 HOH A 72 372 93 HOH HOH . G 6 HOH A 73 373 60 HOH HOH . G 6 HOH A 74 374 92 HOH HOH . G 6 HOH A 75 375 19 HOH HOH . G 6 HOH A 76 376 91 HOH HOH . G 6 HOH A 77 377 71 HOH HOH . G 6 HOH A 78 378 24 HOH HOH . G 6 HOH A 79 379 31 HOH HOH . G 6 HOH A 80 380 44 HOH HOH . G 6 HOH A 81 381 107 HOH HOH . G 6 HOH A 82 382 90 HOH HOH . G 6 HOH A 83 383 25 HOH HOH . G 6 HOH A 84 384 68 HOH HOH . G 6 HOH A 85 385 78 HOH HOH . G 6 HOH A 86 386 85 HOH HOH . G 6 HOH A 87 387 82 HOH HOH . G 6 HOH A 88 388 112 HOH HOH . G 6 HOH A 89 389 74 HOH HOH . G 6 HOH A 90 390 118 HOH HOH . G 6 HOH A 91 391 62 HOH HOH . G 6 HOH A 92 392 29 HOH HOH . G 6 HOH A 93 393 119 HOH HOH . G 6 HOH A 94 394 115 HOH HOH . G 6 HOH A 95 395 47 HOH HOH . G 6 HOH A 96 396 89 HOH HOH . G 6 HOH A 97 397 108 HOH HOH . G 6 HOH A 98 398 46 HOH HOH . G 6 HOH A 99 399 111 HOH HOH . G 6 HOH A 100 400 109 HOH HOH . G 6 HOH A 101 401 23 HOH HOH . G 6 HOH A 102 402 72 HOH HOH . G 6 HOH A 103 403 28 HOH HOH . G 6 HOH A 104 404 103 HOH HOH . G 6 HOH A 105 405 106 HOH HOH . G 6 HOH A 106 406 57 HOH HOH . G 6 HOH A 107 407 114 HOH HOH . G 6 HOH A 108 408 51 HOH HOH . G 6 HOH A 109 409 83 HOH HOH . G 6 HOH A 110 410 94 HOH HOH . G 6 HOH A 111 411 117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 QWK . . . E 5 -22.532 14.062 13.254 1 30.04 ? C2 QWK 204 A 1 HETATM 2 C C8 QWK . . . E 5 -28.802 14.809 12.64 1 35 ? C8 QWK 204 A 1 HETATM 3 C C9 QWK . . . E 5 -29.894 14.171 13.465 1 35.01 ? C9 QWK 204 A 1 HETATM 4 C C10 QWK . . . E 5 -30.114 14.569 14.777 1 34.95 ? C10 QWK 204 A 1 HETATM 5 C C11 QWK . . . E 5 -31.114 13.98 15.538 1 37.63 ? C11 QWK 204 A 1 HETATM 6 C C12 QWK . . . E 5 -31.883 12.961 15.005 1 37.37 ? C12 QWK 204 A 1 HETATM 7 C C13 QWK . . . E 5 -31.656 12.539 13.707 1 38.66 ? C13 QWK 204 A 1 HETATM 8 C C14 QWK . . . E 5 -30.651 13.125 12.951 1 35.99 ? C14 QWK 204 A 1 HETATM 9 C C15 QWK . . . E 5 -27.106 13.081 12.476 1 33.74 ? C15 QWK 204 A 1 HETATM 10 C C16 QWK . . . E 5 -25.83 12.536 13.083 1 32.48 ? C16 QWK 204 A 1 HETATM 11 N N18 QWK . . . E 5 -23.495 13.134 13.237 1 29.26 ? N18 QWK 204 A 1 HETATM 12 C C19 QWK . . . E 5 -20.095 14.279 13.402 1 31.2 ? C19 QWK 204 A 1 HETATM 13 C C20 QWK . . . E 5 -18.856 13.428 13.519 1 26.46 ? C20 QWK 204 A 1 HETATM 14 C C21 QWK . . . E 5 -17.578 14.243 13.426 1 26.19 ? C21 QWK 204 A 1 HETATM 15 N N1 QWK . . . E 5 -21.242 13.571 13.382 1 30.41 ? N1 QWK 204 A 1 HETATM 16 N N3 QWK . . . E 5 -22.71 15.396 13.198 1 28.49 ? N3 QWK 204 A 1 HETATM 17 C C4 QWK . . . E 5 -23.977 15.81 13.071 1 30.87 ? C4 QWK 204 A 1 HETATM 18 C C5 QWK . . . E 5 -25.069 14.972 13.017 1 32.2 ? C5 QWK 204 A 1 HETATM 19 C C6 QWK . . . E 5 -26.484 15.476 12.841 1 32.88 ? C6 QWK 204 A 1 HETATM 20 N N7 QWK . . . E 5 -27.457 14.39 13.053 1 33.56 ? N7 QWK 204 A 1 HETATM 21 C C17 QWK . . . E 5 -24.751 13.585 13.091 1 30.32 ? C17 QWK 204 A 1 HETATM 22 O O22 QWK . . . E 5 -20.044 15.502 13.288 1 31.88 ? O22 QWK 204 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #