data_7A21 # _model_server_result.job_id MZ6JI3jc2JYPNqVnaD9jOg _model_server_result.datetime_utc '2024-10-11 00:29:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":504}' # _entry.id 7A21 # _exptl.entry_id 7A21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A21 _cell.length_a 59.65 _cell.length_b 85.53 _cell.length_c 137.24 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 92 n n C1 C2 EDO sing 93 n n C1 H11 EDO sing 94 n n C1 H12 EDO sing 95 n n O1 HO1 EDO sing 96 n n C2 O2 EDO sing 97 n n C2 H21 EDO sing 98 n n C2 H22 EDO sing 99 n n O2 HO2 EDO sing 100 n n # _atom_sites.entry_id 7A21 _atom_sites.fract_transf_matrix[1][1] 0.016764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007287 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QWQ A 1 501 501 QWQ LIG . D 3 DMS A 1 502 601 DMS DMS . E 2 QWQ B 1 501 501 QWQ LIG . F 3 DMS B 1 502 601 DMS DMS . G 4 EDO B 1 503 701 EDO EDO . H 4 EDO B 1 504 801 EDO EDO . I 5 HOH A 1 601 129 HOH HOH . I 5 HOH A 2 602 28 HOH HOH . I 5 HOH A 3 603 15 HOH HOH . I 5 HOH A 4 604 73 HOH HOH . I 5 HOH A 5 605 36 HOH HOH . I 5 HOH A 6 606 61 HOH HOH . I 5 HOH A 7 607 85 HOH HOH . I 5 HOH A 8 608 46 HOH HOH . I 5 HOH A 9 609 55 HOH HOH . I 5 HOH A 10 610 23 HOH HOH . I 5 HOH A 11 611 107 HOH HOH . I 5 HOH A 12 612 78 HOH HOH . I 5 HOH A 13 613 16 HOH HOH . I 5 HOH A 14 614 41 HOH HOH . I 5 HOH A 15 615 77 HOH HOH . I 5 HOH A 16 616 26 HOH HOH . I 5 HOH A 17 617 6 HOH HOH . I 5 HOH A 18 618 44 HOH HOH . I 5 HOH A 19 619 125 HOH HOH . I 5 HOH A 20 620 74 HOH HOH . I 5 HOH A 21 621 38 HOH HOH . I 5 HOH A 22 622 12 HOH HOH . I 5 HOH A 23 623 123 HOH HOH . I 5 HOH A 24 624 118 HOH HOH . I 5 HOH A 25 625 7 HOH HOH . I 5 HOH A 26 626 137 HOH HOH . I 5 HOH A 27 627 59 HOH HOH . I 5 HOH A 28 628 53 HOH HOH . I 5 HOH A 29 629 19 HOH HOH . I 5 HOH A 30 630 117 HOH HOH . I 5 HOH A 31 631 17 HOH HOH . I 5 HOH A 32 632 109 HOH HOH . I 5 HOH A 33 633 136 HOH HOH . I 5 HOH A 34 634 108 HOH HOH . I 5 HOH A 35 635 81 HOH HOH . I 5 HOH A 36 636 21 HOH HOH . I 5 HOH A 37 637 57 HOH HOH . I 5 HOH A 38 638 139 HOH HOH . I 5 HOH A 39 639 111 HOH HOH . I 5 HOH A 40 640 22 HOH HOH . I 5 HOH A 41 641 18 HOH HOH . I 5 HOH A 42 642 101 HOH HOH . I 5 HOH A 43 643 27 HOH HOH . I 5 HOH A 44 644 51 HOH HOH . I 5 HOH A 45 645 133 HOH HOH . I 5 HOH A 46 646 76 HOH HOH . I 5 HOH A 47 647 31 HOH HOH . I 5 HOH A 48 648 50 HOH HOH . I 5 HOH A 49 649 132 HOH HOH . I 5 HOH A 50 650 32 HOH HOH . I 5 HOH A 51 651 65 HOH HOH . I 5 HOH A 52 652 67 HOH HOH . I 5 HOH A 53 653 127 HOH HOH . I 5 HOH A 54 654 113 HOH HOH . I 5 HOH A 55 655 66 HOH HOH . I 5 HOH A 56 656 48 HOH HOH . I 5 HOH A 57 657 60 HOH HOH . I 5 HOH A 58 658 116 HOH HOH . I 5 HOH A 59 659 11 HOH HOH . I 5 HOH A 60 660 4 HOH HOH . I 5 HOH A 61 661 91 HOH HOH . I 5 HOH A 62 662 105 HOH HOH . I 5 HOH A 63 663 75 HOH HOH . I 5 HOH A 64 664 138 HOH HOH . I 5 HOH A 65 665 128 HOH HOH . I 5 HOH A 66 666 131 HOH HOH . I 5 HOH A 67 667 135 HOH HOH . I 5 HOH A 68 668 120 HOH HOH . I 5 HOH A 69 669 126 HOH HOH . I 5 HOH A 70 670 124 HOH HOH . I 5 HOH A 71 671 45 HOH HOH . I 5 HOH A 72 672 97 HOH HOH . I 5 HOH A 73 673 5 HOH HOH . I 5 HOH A 74 674 152 HOH HOH . J 5 HOH B 1 601 104 HOH HOH . J 5 HOH B 2 602 147 HOH HOH . J 5 HOH B 3 603 64 HOH HOH . J 5 HOH B 4 604 56 HOH HOH . J 5 HOH B 5 605 68 HOH HOH . J 5 HOH B 6 606 134 HOH HOH . J 5 HOH B 7 607 145 HOH HOH . J 5 HOH B 8 608 43 HOH HOH . J 5 HOH B 9 609 8 HOH HOH . J 5 HOH B 10 610 110 HOH HOH . J 5 HOH B 11 611 148 HOH HOH . J 5 HOH B 12 612 141 HOH HOH . J 5 HOH B 13 613 100 HOH HOH . J 5 HOH B 14 614 99 HOH HOH . J 5 HOH B 15 615 140 HOH HOH . J 5 HOH B 16 616 10 HOH HOH . J 5 HOH B 17 617 80 HOH HOH . J 5 HOH B 18 618 143 HOH HOH . J 5 HOH B 19 619 144 HOH HOH . J 5 HOH B 20 620 39 HOH HOH . J 5 HOH B 21 621 122 HOH HOH . J 5 HOH B 22 622 79 HOH HOH . J 5 HOH B 23 623 90 HOH HOH . J 5 HOH B 24 624 151 HOH HOH . J 5 HOH B 25 625 2 HOH HOH . J 5 HOH B 26 626 102 HOH HOH . J 5 HOH B 27 627 114 HOH HOH . J 5 HOH B 28 628 62 HOH HOH . J 5 HOH B 29 629 25 HOH HOH . J 5 HOH B 30 630 35 HOH HOH . J 5 HOH B 31 631 49 HOH HOH . J 5 HOH B 32 632 88 HOH HOH . J 5 HOH B 33 633 42 HOH HOH . J 5 HOH B 34 634 83 HOH HOH . J 5 HOH B 35 635 33 HOH HOH . J 5 HOH B 36 636 37 HOH HOH . J 5 HOH B 37 637 9 HOH HOH . J 5 HOH B 38 638 34 HOH HOH . J 5 HOH B 39 639 72 HOH HOH . J 5 HOH B 40 640 20 HOH HOH . J 5 HOH B 41 641 94 HOH HOH . J 5 HOH B 42 642 84 HOH HOH . J 5 HOH B 43 643 24 HOH HOH . J 5 HOH B 44 644 115 HOH HOH . J 5 HOH B 45 645 89 HOH HOH . J 5 HOH B 46 646 1 HOH HOH . J 5 HOH B 47 647 71 HOH HOH . J 5 HOH B 48 648 142 HOH HOH . J 5 HOH B 49 649 119 HOH HOH . J 5 HOH B 50 650 98 HOH HOH . J 5 HOH B 51 651 14 HOH HOH . J 5 HOH B 52 652 47 HOH HOH . J 5 HOH B 53 653 96 HOH HOH . J 5 HOH B 54 654 29 HOH HOH . J 5 HOH B 55 655 30 HOH HOH . J 5 HOH B 56 656 149 HOH HOH . J 5 HOH B 57 657 146 HOH HOH . J 5 HOH B 58 658 69 HOH HOH . J 5 HOH B 59 659 52 HOH HOH . J 5 HOH B 60 660 92 HOH HOH . J 5 HOH B 61 661 40 HOH HOH . J 5 HOH B 62 662 150 HOH HOH . J 5 HOH B 63 663 93 HOH HOH . J 5 HOH B 64 664 121 HOH HOH . J 5 HOH B 65 665 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 4 -21.865 -8.01 62.2 1 44.25 ? C1 EDO 504 B 1 HETATM 2 O O1 EDO . . . H 4 -20.572 -7.408 62.047 1 48.89 ? O1 EDO 504 B 1 HETATM 3 C C2 EDO . . . H 4 -22.295 -8.572 60.849 1 40.56 ? C2 EDO 504 B 1 HETATM 4 O O2 EDO . . . H 4 -23.252 -9.619 61.05 1 41.98 ? O2 EDO 504 B 1 HETATM 5 H H11 EDO . . . H 4 -22.587 -7.268 62.546 1 53 ? H11 EDO 504 B 1 HETATM 6 H H12 EDO . . . H 4 -21.822 -8.809 62.943 1 53 ? H12 EDO 504 B 1 HETATM 7 H HO1 EDO . . . H 4 -20.659 -6.445 62.076 1 58.57 ? HO1 EDO 504 B 1 HETATM 8 H H21 EDO . . . H 4 -21.426 -8.962 60.315 1 48.57 ? H21 EDO 504 B 1 HETATM 9 H H22 EDO . . . H 4 -22.735 -7.779 60.241 1 48.57 ? H22 EDO 504 B 1 HETATM 10 H HO2 EDO . . . H 4 -23.717 -9.475 61.886 1 50.28 ? HO2 EDO 504 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #