data_7A23
#
_model_server_result.job_id            b5OwYfuHQfux-K2Y4wQgIw 
_model_server_result.datetime_utc      '2025-07-03 01:16:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7a23 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"UA","auth_seq_id":502}' 
#
_entry.id    7A23 
#
_exptl.entry_id    7A23 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          46 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7A23 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7A23 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    45-meric 
_pdbx_struct_assembly.oligomeric_count      45 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      46 
_struct_asym.id                             UA 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 336 I CYS 336 1_555 B SG CYS 420 I CYS 420 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 G SG CYS 29 Y CYS 29 1_555 G SG CYS 59 Y CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf3 G SG CYS 39 Y CYS 39 1_555 G SG CYS 49 Y CYS 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf4 G SG CYS 81 Y CYS 81 1_555 G SG CYS 92 Y CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 M SG CYS 14 j CYS 14 1_555 M SG CYS 44 j CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf6 M SG CYS 24 j CYS 24 1_555 M SG CYS 34 j CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 M SG CYS 28 j CYS 28 1_555 M SG CYS 34 j CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf8 AA SG CYS 19 Q CYS 19 1_555 AA SG CYS 53 Q CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf9 IA SG CYS 58 f CYS 58 1_555 IA SG CYS 70 f CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf10 MA SG CYS 40 b CYS 40 1_555 MA SG CYS 51 b CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
metalc ? metalc1 A SG CYS 405 A CYS 405 1_555 TA FE1 SF4 . A SF4 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc2 O O CYS 117 C CYS 117 1_555 DB FE1 FES . C FES 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? 
metalc ? metalc3 O SG CYS 117 C CYS 117 1_555 DB FE1 FES . C FES 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc4 O SG CYS 134 C CYS 134 1_555 DB FE2 FES . C FES 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? 
metalc ? metalc5 O NE2 HIS 166 C HIS 166 1_555 BB FE3 SF4 . C SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc6 O SG CYS 170 C CYS 170 1_555 BB FE2 SF4 . C SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc7 O SG CYS 173 C CYS 173 1_555 BB FE4 SF4 . C SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? 
metalc ? metalc8 O SG CYS 179 C CYS 179 1_555 BB FE1 SF4 . C SF4 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? 
metalc ? metalc9 O SG CYS 218 C CYS 218 1_555 CB FE2 SF4 . C SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? 
metalc ? metalc10 O SG CYS 221 C CYS 221 1_555 CB FE1 SF4 . C SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.243 ? 
metalc ? metalc11 O SG CYS 224 C CYS 224 1_555 CB FE3 SF4 . C SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc12 O SG CYS 268 C CYS 268 1_555 CB FE4 SF4 . C SF4 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? 
metalc ? metalc13 T SG CYS 72 P CYS 72 1_555 GB ZN ZN . P ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc14 T NE2 HIS 82 P HIS 82 1_555 GB ZN ZN . P ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.942 ? 
metalc ? metalc15 T SG CYS 97 P CYS 97 1_555 GB ZN ZN . P ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc16 W SG CYS 93 E CYS 93 1_555 HB FE3 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
metalc ? metalc17 W SG CYS 94 E CYS 94 1_555 HB FE2 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? 
metalc ? metalc18 W SG CYS 158 E CYS 158 1_555 HB FE1 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? 
metalc ? metalc19 W SG CYS 188 E CYS 188 1_555 HB FE4 SF4 . E SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? 
metalc ? metalc20 X SG CYS 123 D CYS 123 1_555 JB FE3 SF4 . D SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc21 X SG CYS 126 D CYS 126 1_555 JB FE4 SF4 . D SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc22 X SG CYS 129 D CYS 129 1_555 JB FE2 SF4 . D SF4 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? 
metalc ? metalc23 X SG CYS 133 D CYS 133 1_555 IB FE4 SF4 . D SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc24 X SG CYS 162 D CYS 162 1_555 IB FE2 SF4 . D SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? 
metalc ? metalc25 X SG CYS 165 D CYS 165 1_555 IB FE1 SF4 . D SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? 
metalc ? metalc26 X SG CYS 168 D CYS 168 1_555 IB FE3 SF4 . D SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc27 FA NE2 HIS 107 q HIS 107 1_555 KB ZN ZN . q ZN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc28 KB ZN ZN . q ZN 801 1_555 LB O1 BCT . q BCT 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc29 KB ZN ZN . q ZN 801 1_555 LB O2 BCT . q BCT 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc30 KB ZN ZN . q ZN 801 1_555 GA NE2 HIS 130 p HIS 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 346 n n 
N1 C10 FMN doub 347 n n 
C2 O2 FMN doub 348 n n 
C2 N3 FMN sing 349 n n 
N3 C4 FMN sing 350 n n 
N3 HN3 FMN sing 351 n n 
C4 O4 FMN doub 352 n n 
C4 C4A FMN sing 353 n n 
C4A N5 FMN doub 354 n n 
C4A C10 FMN sing 355 n n 
N5 C5A FMN sing 356 n n 
C5A C6 FMN doub 357 n y 
C5A C9A FMN sing 358 n y 
C6 C7 FMN sing 359 n y 
C6 H6 FMN sing 360 n n 
C7 C7M FMN sing 361 n n 
C7 C8 FMN doub 362 n y 
C7M HM71 FMN sing 363 n n 
C7M HM72 FMN sing 364 n n 
C7M HM73 FMN sing 365 n n 
C8 C8M FMN sing 366 n n 
C8 C9 FMN sing 367 n y 
C8M HM81 FMN sing 368 n n 
C8M HM82 FMN sing 369 n n 
C8M HM83 FMN sing 370 n n 
C9 C9A FMN doub 371 n y 
C9 H9 FMN sing 372 n n 
C9A N10 FMN sing 373 n n 
N10 C10 FMN sing 374 n n 
N10 C1' FMN sing 375 n n 
C1' C2' FMN sing 376 n n 
C1' "H1'1" FMN sing 377 n n 
C1' "H1'2" FMN sing 378 n n 
C2' O2' FMN sing 379 n n 
C2' C3' FMN sing 380 n n 
C2' H2' FMN sing 381 n n 
O2' HO2' FMN sing 382 n n 
C3' O3' FMN sing 383 n n 
C3' C4' FMN sing 384 n n 
C3' H3' FMN sing 385 n n 
O3' HO3' FMN sing 386 n n 
C4' O4' FMN sing 387 n n 
C4' C5' FMN sing 388 n n 
C4' H4' FMN sing 389 n n 
O4' HO4' FMN sing 390 n n 
C5' O5' FMN sing 391 n n 
C5' "H5'1" FMN sing 392 n n 
C5' "H5'2" FMN sing 393 n n 
O5' P FMN sing 394 n n 
P O1P FMN doub 395 n n 
P O2P FMN sing 396 n n 
P O3P FMN sing 397 n n 
O2P HOP2 FMN sing 398 n n 
O3P HOP3 FMN sing 399 n n 
#
_atom_sites.entry_id                     7A23 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
TA 45 SF4 A 1 501 501 SF4 SF4 . 
UA 46 FMN A 1 502 501 FMN FMN . 
VA 47 T7X I 1 501 501 T7X T7X . 
WA 48 CDL I 1 502 201 CDL CDL . 
XA 48 CDL I 1 503 501 CDL CDL . 
YA 48 CDL J 1 401 401 CDL CDL . 
ZA 49 U10 H 1 501 501 U10 U10 . 
AB 50 PEV H 1 502 601 PEV PEV . 
BB 45 SF4 C 1 801 801 SF4 SF4 . 
CB 45 SF4 C 1 802 802 SF4 SF4 . 
DB 51 FES C 1 803 803 FES FES . 
EB 52 NDP T 1 501 401 NDP NDP . 
FB 51 FES B 1 301 301 FES FES . 
GB 53 ZN P 1 201 201 ZN ZN . 
HB 45 SF4 E 1 301 301 SF4 SF4 . 
IB 45 SF4 D 1 301 301 SF4 SF4 . 
JB 45 SF4 D 1 302 302 SF4 SF4 . 
KB 53 ZN q 1 801 801 ZN ZN . 
LB 54 BCT q 1 802 802 BCT BCT . 
MB 47 T7X p 1 301 301 T7X T7X . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . UA 46 183.894 188.277 308.587 1 20 ? N1 FMN 502 A 1 
HETATM 2 C C2 FMN . . . UA 46 183.455 188.82 309.746 1 20 ? C2 FMN 502 A 1 
HETATM 3 O O2 FMN . . . UA 46 183.603 188.23 310.812 1 20 ? O2 FMN 502 A 1 
HETATM 4 N N3 FMN . . . UA 46 182.834 190.025 309.793 1 20 ? N3 FMN 502 A 1 
HETATM 5 C C4 FMN . . . UA 46 182.616 190.77 308.662 1 20 ? C4 FMN 502 A 1 
HETATM 6 O O4 FMN . . . UA 46 182.054 191.852 308.749 1 20 ? O4 FMN 502 A 1 
HETATM 7 C C4A FMN . . . UA 46 183.059 190.245 307.434 1 20 ? C4A FMN 502 A 1 
HETATM 8 N N5 FMN . . . UA 46 182.858 190.946 306.346 1 20 ? N5 FMN 502 A 1 
HETATM 9 C C5A FMN . . . UA 46 183.304 190.413 305.166 1 20 ? C5A FMN 502 A 1 
HETATM 10 C C6 FMN . . . UA 46 183.104 191.143 303.982 1 20 ? C6 FMN 502 A 1 
HETATM 11 C C7 FMN . . . UA 46 183.529 190.664 302.767 1 20 ? C7 FMN 502 A 1 
HETATM 12 C C7M FMN . . . UA 46 183.302 191.473 301.519 1 20 ? C7M FMN 502 A 1 
HETATM 13 C C8 FMN . . . UA 46 184.178 189.409 302.7 1 20 ? C8 FMN 502 A 1 
HETATM 14 C C8M FMN . . . UA 46 184.661 188.86 301.384 1 20 ? C8M FMN 502 A 1 
HETATM 15 C C9 FMN . . . UA 46 184.378 188.685 303.848 1 20 ? C9 FMN 502 A 1 
HETATM 16 C C9A FMN . . . UA 46 183.951 189.166 305.094 1 20 ? C9A FMN 502 A 1 
HETATM 17 N N10 FMN . . . UA 46 184.139 188.449 306.269 1 20 ? N10 FMN 502 A 1 
HETATM 18 C C10 FMN . . . UA 46 183.708 188.959 307.478 1 20 ? C10 FMN 502 A 1 
HETATM 19 C C1' FMN . . . UA 46 184.818 187.144 306.2 1 20 ? C1' FMN 502 A 1 
HETATM 20 C C2' FMN . . . UA 46 183.915 186.052 305.664 1 20 ? C2' FMN 502 A 1 
HETATM 21 O O2' FMN . . . UA 46 183.048 186.529 304.644 1 20 ? O2' FMN 502 A 1 
HETATM 22 C C3' FMN . . . UA 46 183.104 185.393 306.777 1 20 ? C3' FMN 502 A 1 
HETATM 23 O O3' FMN . . . UA 46 182.358 186.39 307.463 1 20 ? O3' FMN 502 A 1 
HETATM 24 C C4' FMN . . . UA 46 183.991 184.656 307.78 1 20 ? C4' FMN 502 A 1 
HETATM 25 O O4' FMN . . . UA 46 185.171 184.218 307.107 1 20 ? O4' FMN 502 A 1 
HETATM 26 C C5' FMN . . . UA 46 183.303 183.429 308.323 1 20 ? C5' FMN 502 A 1 
HETATM 27 O O5' FMN . . . UA 46 182.042 183.802 308.924 1 20 ? O5' FMN 502 A 1 
HETATM 28 P P FMN . . . UA 46 180.913 182.67 309.052 1 20 ? P FMN 502 A 1 
HETATM 29 O O1P FMN . . . UA 46 180.36 182.493 307.651 1 20 ? O1P FMN 502 A 1 
HETATM 30 O O2P FMN . . . UA 46 181.625 181.431 309.561 1 20 ? O2P FMN 502 A 1 
HETATM 31 O O3P FMN . . . UA 46 179.904 183.224 310.034 1 20 ? O3P FMN 502 A 1 
#
_model_server_stats.io_time_ms              28 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    92 
_model_server_stats.query_time_ms           349 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           31 
#