data_7A2M # _model_server_result.job_id eLmsW0iMZ-PpyOxE2-hPfQ _model_server_result.datetime_utc '2024-11-23 04:29:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a2m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":201}' # _entry.id 7A2M # _exptl.entry_id 7A2M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.42 _cell.angle_gamma 90 _cell.entry_id 7A2M _cell.length_a 72.694 _cell.length_b 47.048 _cell.length_c 42.712 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A2M _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,H 1 1 B,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 13 A SER 95 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc2 A O THR 15 A THR 97 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc3 A O ASP 18 A ASP 100 1_555 C NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc4 A O SER 53 A SER 135 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc5 A O VAL 56 A VAL 138 1_555 D NA NA . A NA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc6 C NA NA . A NA 201 1_555 H O HOH . A HOH 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc7 C NA NA . A NA 201 1_555 H O HOH . A HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc8 C NA NA . A NA 201 1_555 H O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.929 ? metalc ? metalc9 D NA NA . A NA 202 1_555 I O HOH . B HOH 326 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc10 D NA NA . A NA 202 1_555 I O HOH . B HOH 332 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc11 D NA NA . A NA 202 1_555 I O HOH . B HOH 333 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc12 B O SER 53 B SER 135 1_555 F NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc13 B O VAL 56 B VAL 138 1_555 F NA NA . B NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.047 ? metalc ? metalc14 F NA NA . B NA 201 1_555 I O HOH . B HOH 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc15 F NA NA . B NA 201 1_555 I O HOH . B HOH 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7A2M _atom_sites.fract_transf_matrix[1][1] 0.013756 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001792 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021255 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 201 2 NA NA . D 2 NA A 1 202 3 NA NA . E 3 SO4 A 1 203 1 SO4 SO4 . F 2 NA B 1 201 1 NA NA . G 4 FMT B 1 202 1 FMT FMT . H 5 HOH A 1 301 45 HOH HOH . H 5 HOH A 2 302 43 HOH HOH . H 5 HOH A 3 303 13 HOH HOH . H 5 HOH A 4 304 49 HOH HOH . H 5 HOH A 5 305 79 HOH HOH . H 5 HOH A 6 306 20 HOH HOH . H 5 HOH A 7 307 31 HOH HOH . H 5 HOH A 8 308 40 HOH HOH . H 5 HOH A 9 309 28 HOH HOH . H 5 HOH A 10 310 26 HOH HOH . H 5 HOH A 11 311 4 HOH HOH . H 5 HOH A 12 312 15 HOH HOH . H 5 HOH A 13 313 39 HOH HOH . H 5 HOH A 14 314 77 HOH HOH . H 5 HOH A 15 315 12 HOH HOH . H 5 HOH A 16 316 62 HOH HOH . H 5 HOH A 17 317 57 HOH HOH . H 5 HOH A 18 318 72 HOH HOH . H 5 HOH A 19 319 6 HOH HOH . H 5 HOH A 20 320 24 HOH HOH . H 5 HOH A 21 321 37 HOH HOH . H 5 HOH A 22 322 10 HOH HOH . H 5 HOH A 23 323 36 HOH HOH . H 5 HOH A 24 324 78 HOH HOH . H 5 HOH A 25 325 80 HOH HOH . H 5 HOH A 26 326 8 HOH HOH . H 5 HOH A 27 327 32 HOH HOH . H 5 HOH A 28 328 47 HOH HOH . H 5 HOH A 29 329 58 HOH HOH . H 5 HOH A 30 330 71 HOH HOH . H 5 HOH A 31 331 52 HOH HOH . H 5 HOH A 32 332 41 HOH HOH . H 5 HOH A 33 333 55 HOH HOH . H 5 HOH A 34 334 25 HOH HOH . H 5 HOH A 35 335 76 HOH HOH . H 5 HOH A 36 336 18 HOH HOH . H 5 HOH A 37 337 46 HOH HOH . H 5 HOH A 38 338 74 HOH HOH . H 5 HOH A 39 339 83 HOH HOH . H 5 HOH A 40 340 54 HOH HOH . H 5 HOH A 41 341 75 HOH HOH . I 5 HOH B 1 301 33 HOH HOH . I 5 HOH B 2 302 19 HOH HOH . I 5 HOH B 3 303 7 HOH HOH . I 5 HOH B 4 304 90 HOH HOH . I 5 HOH B 5 305 60 HOH HOH . I 5 HOH B 6 306 89 HOH HOH . I 5 HOH B 7 307 86 HOH HOH . I 5 HOH B 8 308 14 HOH HOH . I 5 HOH B 9 309 17 HOH HOH . I 5 HOH B 10 310 87 HOH HOH . I 5 HOH B 11 311 66 HOH HOH . I 5 HOH B 12 312 63 HOH HOH . I 5 HOH B 13 313 9 HOH HOH . I 5 HOH B 14 314 11 HOH HOH . I 5 HOH B 15 315 51 HOH HOH . I 5 HOH B 16 316 67 HOH HOH . I 5 HOH B 17 317 3 HOH HOH . I 5 HOH B 18 318 70 HOH HOH . I 5 HOH B 19 319 29 HOH HOH . I 5 HOH B 20 320 2 HOH HOH . I 5 HOH B 21 321 23 HOH HOH . I 5 HOH B 22 322 16 HOH HOH . I 5 HOH B 23 323 1 HOH HOH . I 5 HOH B 24 324 48 HOH HOH . I 5 HOH B 25 325 50 HOH HOH . I 5 HOH B 26 326 35 HOH HOH . I 5 HOH B 27 327 22 HOH HOH . I 5 HOH B 28 328 88 HOH HOH . I 5 HOH B 29 329 27 HOH HOH . I 5 HOH B 30 330 69 HOH HOH . I 5 HOH B 31 331 53 HOH HOH . I 5 HOH B 32 332 42 HOH HOH . I 5 HOH B 33 333 5 HOH HOH . I 5 HOH B 34 334 65 HOH HOH . I 5 HOH B 35 335 85 HOH HOH . I 5 HOH B 36 336 91 HOH HOH . I 5 HOH B 37 337 82 HOH HOH . I 5 HOH B 38 338 21 HOH HOH . I 5 HOH B 39 339 64 HOH HOH . I 5 HOH B 40 340 73 HOH HOH . I 5 HOH B 41 341 68 HOH HOH . I 5 HOH B 42 342 84 HOH HOH . I 5 HOH B 43 343 38 HOH HOH . I 5 HOH B 44 344 56 HOH HOH . I 5 HOH B 45 345 61 HOH HOH . I 5 HOH B 46 346 81 HOH HOH . I 5 HOH B 47 347 30 HOH HOH . I 5 HOH B 48 348 59 HOH HOH . I 5 HOH B 49 349 44 HOH HOH . I 5 HOH B 50 350 34 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x 13.341 _atom_site.Cartn_y -16.163 _atom_site.Cartn_z 14.717 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 62.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #