data_7A3I
#
_model_server_result.job_id            -b4EZ6FTuwJwSP0rJeIkTA 
_model_server_result.datetime_utc      '2024-10-20 13:09:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7a3i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":902}' 
#
_entry.id    7A3I 
#
_exptl.entry_id    7A3I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              753.609 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[3,5-bis[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-2-ethyl-2-methanoyl-butanamide 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7A3I 
_cell.length_a            163.649 
_cell.length_b            252.318 
_cell.length_c            259.962 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7A3I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,P 1 1 
A,D,E,F,G,P 1 2 
B,C,H,I,J,K,L,M,N,O,Q,R 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 I N N 
? 3 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 755 A SER 755 1_555 E C7 QXH . A QXH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? 
covale ? covale2 B OG SER 755 B SER 755 1_555 I C7 QXH . B QXH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
covale ? covale3 C OG SER 755 C SER 755 1_555 M C7 QXH . C QXH 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.458 ? 
metalc ? metalc1 A OD1 ASP 278 A ASP 278 1_555 F NA NA . A NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? 
metalc ? metalc2 B O GLN 274 B GLN 274 1_555 J NA NA . B NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.91 ? 
metalc ? metalc3 B OD1 ASP 278 B ASP 278 1_555 J NA NA . B NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? 
metalc ? metalc4 B OH TYR 280 B TYR 280 1_555 J NA NA . B NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
metalc ? metalc5 C OD1 ASP 278 C ASP 278 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.934 ? 
metalc ? metalc6 C OH TYR 280 C TYR 280 1_555 N NA NA . C NA 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? 
#
_chem_comp.formula           'C37 H47 Br2 N5 O2' 
_chem_comp.formula_weight    753.609 
_chem_comp.id                QXH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[3,5-bis[[4-[(4-bromophenyl)methyl]piperazin-1-yl]methyl]phenyl]-2-ethyl-2-methanoyl-butanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O8 C7 QXH doub 277 n n 
C7 C1 QXH sing 278 n n 
C5 C4 QXH sing 279 n n 
C3 C2 QXH sing 280 n n 
C1 C2 QXH sing 281 n n 
C1 C4 QXH sing 282 n n 
C1 C6 QXH sing 283 n n 
O10 C6 QXH doub 284 n n 
C6 N9 QXH sing 285 n n 
C18 N19 QXH sing 286 n n 
C18 C17 QXH sing 287 n n 
C22 N19 QXH sing 288 n n 
C22 C23 QXH sing 289 n n 
N9 C8 QXH sing 290 n n 
C20 N19 QXH sing 291 n n 
C20 C21 QXH sing 292 n n 
C17 N16 QXH sing 293 n n 
C28 C23 QXH doub 294 n y 
C28 C27 QXH sing 295 n y 
N16 C21 QXH sing 296 n n 
N16 C14 QXH sing 297 n n 
C9 C8 QXH doub 298 n y 
C9 C10 QXH sing 299 n y 
C23 C24 QXH sing 300 n y 
C8 C13 QXH sing 301 n y 
C27 C26 QXH doub 302 n y 
C14 C10 QXH sing 303 n n 
C10 C11 QXH doub 304 n y 
C13 C12 QXH doub 305 n y 
C24 C25 QXH doub 306 n y 
C26 C25 QXH sing 307 n y 
C26 BR1 QXH sing 308 n n 
C11 C12 QXH sing 309 n y 
C12 C33 QXH sing 310 n n 
C33 N34 QXH sing 311 n n 
C35 N34 QXH sing 312 n n 
C35 C36 QXH sing 313 n n 
N34 C39 QXH sing 314 n n 
C36 N37 QXH sing 315 n n 
C39 C38 QXH sing 316 n n 
N37 C38 QXH sing 317 n n 
N37 C40 QXH sing 318 n n 
C40 C41 QXH sing 319 n n 
C42 C41 QXH doub 320 n y 
C42 C43 QXH sing 321 n y 
C41 C46 QXH sing 322 n y 
C43 C44 QXH doub 323 n y 
C46 C45 QXH doub 324 n y 
C44 C45 QXH sing 325 n y 
C44 BR2 QXH sing 326 n n 
C13 H1 QXH sing 327 n n 
C14 H2 QXH sing 328 n n 
C14 H3 QXH sing 329 n n 
C17 H5 QXH sing 330 n n 
C17 H6 QXH sing 331 n n 
C18 H7 QXH sing 332 n n 
C18 H8 QXH sing 333 n n 
C20 H10 QXH sing 334 n n 
C20 H11 QXH sing 335 n n 
C21 H12 QXH sing 336 n n 
C21 H13 QXH sing 337 n n 
C22 H14 QXH sing 338 n n 
C22 H15 QXH sing 339 n n 
C2 H16 QXH sing 340 n n 
C2 H17 QXH sing 341 n n 
C3 H18 QXH sing 342 n n 
C3 H19 QXH sing 343 n n 
C3 H20 QXH sing 344 n n 
C4 H21 QXH sing 345 n n 
C4 H22 QXH sing 346 n n 
C5 H23 QXH sing 347 n n 
C5 H24 QXH sing 348 n n 
C5 H25 QXH sing 349 n n 
C7 H26 QXH sing 350 n n 
N9 H27 QXH sing 351 n n 
C9 H28 QXH sing 352 n n 
C11 H29 QXH sing 353 n n 
C24 H30 QXH sing 354 n n 
C25 H31 QXH sing 355 n n 
C27 H32 QXH sing 356 n n 
C28 H33 QXH sing 357 n n 
C33 H34 QXH sing 358 n n 
C33 H35 QXH sing 359 n n 
C35 H37 QXH sing 360 n n 
C35 H38 QXH sing 361 n n 
C36 H39 QXH sing 362 n n 
C36 H40 QXH sing 363 n n 
C38 H42 QXH sing 364 n n 
C38 H43 QXH sing 365 n n 
C39 H44 QXH sing 366 n n 
C39 H45 QXH sing 367 n n 
C40 H46 QXH sing 368 n n 
C40 H47 QXH sing 369 n n 
C42 H48 QXH sing 370 n n 
C43 H49 QXH sing 371 n n 
C45 H50 QXH sing 372 n n 
C46 H51 QXH sing 373 n n 
#
_atom_sites.entry_id                     7A3I 
_atom_sites.fract_transf_matrix[1][1]    0.006111 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003963 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003847 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 TMO A 1 901 1 TMO TMO . 
E 3 QXH A 1 902 1 QXH 375 . 
F 4 NA A 1 903 3 NA NA . 
G 5 CL A 1 904 3 CL CL . 
H 2 TMO B 1 901 2 TMO TMO . 
I 3 QXH B 1 902 2 QXH 375 . 
J 4 NA B 1 903 1 NA NA . 
K 5 CL B 1 904 1 CL CL . 
L 2 TMO C 1 901 3 TMO TMO . 
M 3 QXH C 1 902 3 QXH 375 . 
N 4 NA C 1 903 2 NA NA . 
O 5 CL C 1 904 2 CL CL . 
P 6 HOH A 1 1001 15 HOH HOH . 
P 6 HOH A 2 1002 9 HOH HOH . 
P 6 HOH A 3 1003 19 HOH HOH . 
P 6 HOH A 4 1004 14 HOH HOH . 
P 6 HOH A 5 1005 6 HOH HOH . 
P 6 HOH A 6 1006 25 HOH HOH . 
P 6 HOH A 7 1007 8 HOH HOH . 
P 6 HOH A 8 1008 26 HOH HOH . 
P 6 HOH A 9 1009 5 HOH HOH . 
P 6 HOH A 10 1010 1 HOH HOH . 
P 6 HOH A 11 1011 7 HOH HOH . 
P 6 HOH A 12 1012 27 HOH HOH . 
Q 6 HOH B 1 1001 10 HOH HOH . 
Q 6 HOH B 2 1002 16 HOH HOH . 
Q 6 HOH B 3 1003 18 HOH HOH . 
Q 6 HOH B 4 1004 21 HOH HOH . 
Q 6 HOH B 5 1005 22 HOH HOH . 
Q 6 HOH B 6 1006 2 HOH HOH . 
Q 6 HOH B 7 1007 20 HOH HOH . 
R 6 HOH C 1 1001 4 HOH HOH . 
R 6 HOH C 2 1002 24 HOH HOH . 
R 6 HOH C 3 1003 23 HOH HOH . 
R 6 HOH C 4 1004 3 HOH HOH . 
R 6 HOH C 5 1005 17 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QXH . . . E 3 -28.737 17.581 -5.213 1 88.6 ? C10 QXH 902 A 1 
HETATM 2 C C13 QXH . . . E 3 -30.082 15.193 -4.771 1 87.67 ? C13 QXH 902 A 1 
HETATM 3 C C14 QXH . . . E 3 -28.012 18.895 -5.443 1 90.3 ? C14 QXH 902 A 1 
HETATM 4 N N16 QXH . . . E 3 -26.855 18.839 -6.36 1 91.85 ? N16 QXH 902 A 1 
HETATM 5 C C17 QXH . . . E 3 -26.352 20.228 -6.538 1 89.63 ? C17 QXH 902 A 1 
HETATM 6 C C18 QXH . . . E 3 -24.995 20.301 -7.242 1 88.49 ? C18 QXH 902 A 1 
HETATM 7 N N19 QXH . . . E 3 -24.054 19.396 -6.562 1 87.76 ? N19 QXH 902 A 1 
HETATM 8 C C20 QXH . . . E 3 -24.56 18.022 -6.683 1 89.39 ? C20 QXH 902 A 1 
HETATM 9 C C21 QXH . . . E 3 -25.808 17.945 -5.818 1 91.5 ? C21 QXH 902 A 1 
HETATM 10 C C22 QXH . . . E 3 -22.672 19.511 -7.063 1 87.5 ? C22 QXH 902 A 1 
HETATM 11 C C1 QXH . . . E 3 -32.983 15.156 -8.641 1 71.86 ? C1 QXH 902 A 1 
HETATM 12 C C2 QXH . . . E 3 -34.204 16.045 -8.328 1 73.04 ? C2 QXH 902 A 1 
HETATM 13 C C3 QXH . . . E 3 -35.554 15.583 -8.847 1 77.25 ? C3 QXH 902 A 1 
HETATM 14 C C4 QXH . . . E 3 -33.204 13.702 -8.181 1 70.2 ? C4 QXH 902 A 1 
HETATM 15 C C5 QXH . . . E 3 -34.11 12.812 -9.021 1 70.33 ? C5 QXH 902 A 1 
HETATM 16 C C6 QXH . . . E 3 -31.861 15.879 -7.892 1 76.01 ? C6 QXH 902 A 1 
HETATM 17 C C7 QXH . . . E 3 -32.659 15.154 -10.124 1 66.41 ? C7 QXH 902 A 1 
HETATM 18 O O8 QXH . . . E 3 -33.188 15.905 -10.934 1 64.59 ? O8 QXH 902 A 1 
HETATM 19 N N9 QXH . . . E 3 -31.374 15.392 -6.724 1 80.65 ? N9 QXH 902 A 1 
HETATM 20 O O10 QXH . . . E 3 -31.493 16.935 -8.376 1 77.67 ? O10 QXH 902 A 1 
HETATM 21 C C8 QXH . . . E 3 -30.405 15.938 -5.915 1 84.17 ? C8 QXH 902 A 1 
HETATM 22 C C9 QXH . . . E 3 -29.711 17.15 -6.122 1 86.87 ? C9 QXH 902 A 1 
HETATM 23 C C11 QXH . . . E 3 -28.446 16.822 -4.076 1 87.8 ? C11 QXH 902 A 1 
HETATM 24 C C12 QXH . . . E 3 -29.122 15.623 -3.854 1 90.77 ? C12 QXH 902 A 1 
HETATM 25 C C23 QXH . . . E 3 -21.707 18.907 -6.07 1 87.69 ? C23 QXH 902 A 1 
HETATM 26 C C24 QXH . . . E 3 -21.964 19.025 -4.706 1 90.83 ? C24 QXH 902 A 1 
HETATM 27 C C25 QXH . . . E 3 -21.094 18.464 -3.785 1 95.14 ? C25 QXH 902 A 1 
HETATM 28 C C26 QXH . . . E 3 -19.947 17.789 -4.198 1 97.64 ? C26 QXH 902 A 1 
HETATM 29 C C27 QXH . . . E 3 -19.683 17.667 -5.567 1 94.41 ? C27 QXH 902 A 1 
HETATM 30 C C28 QXH . . . E 3 -20.568 18.223 -6.5 1 90.54 ? C28 QXH 902 A 1 
HETATM 31 BR BR1 QXH . . . E 3 -18.792 17.074 -2.872 1 114.31 ? BR1 QXH 902 A 1 
HETATM 32 C C33 QXH . . . E 3 -28.821 14.768 -2.638 1 96.16 ? C33 QXH 902 A 1 
HETATM 33 N N34 QXH . . . E 3 -29.691 15.092 -1.491 1 104.9 ? N34 QXH 902 A 1 
HETATM 34 C C35 QXH . . . E 3 -31.042 14.514 -1.659 1 112.01 ? C35 QXH 902 A 1 
HETATM 35 C C36 QXH . . . E 3 -31.921 14.878 -0.468 1 119.26 ? C36 QXH 902 A 1 
HETATM 36 N N37 QXH . . . E 3 -31.323 14.364 0.778 1 123.96 ? N37 QXH 902 A 1 
HETATM 37 C C38 QXH . . . E 3 -29.975 14.944 0.947 1 114.24 ? C38 QXH 902 A 1 
HETATM 38 C C39 QXH . . . E 3 -29.096 14.569 -0.246 1 108.37 ? C39 QXH 902 A 1 
HETATM 39 C C40 QXH . . . E 3 -32.198 14.646 1.943 1 135.53 ? C40 QXH 902 A 1 
HETATM 40 C C41 QXH . . . E 3 -32.133 13.578 3.024 1 144.31 ? C41 QXH 902 A 1 
HETATM 41 C C42 QXH . . . E 3 -31.224 12.52 2.964 1 148.24 ? C42 QXH 902 A 1 
HETATM 42 C C43 QXH . . . E 3 -31.184 11.559 3.974 1 149.67 ? C43 QXH 902 A 1 
HETATM 43 C C44 QXH . . . E 3 -32.046 11.63 5.053 1 153.31 ? C44 QXH 902 A 1 
HETATM 44 C C45 QXH . . . E 3 -32.963 12.682 5.131 1 155.37 ? C45 QXH 902 A 1 
HETATM 45 C C46 QXH . . . E 3 -33.005 13.65 4.118 1 151.96 ? C46 QXH 902 A 1 
HETATM 46 BR BR2 QXH . . . E 3 -31.907 10.284 6.371 1 159.97 ? BR2 QXH 902 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           46 
#