data_7A3L
#
_model_server_result.job_id            W5KzmKqlMfsXeVfbc9pdQg 
_model_server_result.datetime_utc      '2024-11-18 06:23:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7a3l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":902}' 
#
_entry.id    7A3L 
#
_exptl.entry_id    7A3L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7A3L 
_cell.length_a            164.034 
_cell.length_b            252.779 
_cell.length_c            261.235 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7A3L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,F,G,H,T 1 1,2 
B,C,I,J,K,L,M,N,O,P,Q,R,S,U,V 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 J N N 
? 3 M N N 
? 3 P N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG SER 755 A SER 755 1_555 D C6 QXN . A QXN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.453 ? 
covale ? covale2 B OG SER 755 B SER 755 1_555 I C6 QXN . B QXN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.452 ? 
covale ? covale3 C OG SER 755 C SER 755 1_555 O C6 QXN . C QXN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7A3L 
_atom_sites.fract_transf_matrix[1][1]    0.006096 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003828 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 QXN A 1 901 901 QXN 241 . 
E 3 GOL A 1 902 1001 GOL GOL . 
F 4 TMO A 1 903 1101 TMO TMO . 
G 3 GOL A 1 904 1201 GOL GOL . 
H 5 CL A 1 905 1 CL CL . 
I 2 QXN B 1 901 901 QXN 241 . 
J 3 GOL B 1 902 1001 GOL GOL . 
K 4 TMO B 1 903 1401 TMO TMO . 
L 4 TMO B 1 904 1501 TMO TMO . 
M 3 GOL B 1 905 1601 GOL GOL . 
N 5 CL B 1 906 2 CL CL . 
O 2 QXN C 1 901 901 QXN 241 . 
P 3 GOL C 1 902 1001 GOL GOL . 
Q 4 TMO C 1 903 1101 TMO TMO . 
R 3 GOL C 1 904 1201 GOL GOL . 
S 5 CL C 1 905 3 CL CL . 
T 6 HOH A 1 1001 43 HOH HOH . 
T 6 HOH A 2 1002 28 HOH HOH . 
T 6 HOH A 3 1003 12 HOH HOH . 
T 6 HOH A 4 1004 30 HOH HOH . 
T 6 HOH A 5 1005 13 HOH HOH . 
T 6 HOH A 6 1006 11 HOH HOH . 
T 6 HOH A 7 1007 22 HOH HOH . 
T 6 HOH A 8 1008 29 HOH HOH . 
T 6 HOH A 9 1009 27 HOH HOH . 
T 6 HOH A 10 1010 38 HOH HOH . 
T 6 HOH A 11 1011 44 HOH HOH . 
T 6 HOH A 12 1012 24 HOH HOH . 
T 6 HOH A 13 1013 4 HOH HOH . 
T 6 HOH A 14 1014 23 HOH HOH . 
T 6 HOH A 15 1015 37 HOH HOH . 
T 6 HOH A 16 1016 21 HOH HOH . 
T 6 HOH A 17 1017 5 HOH HOH . 
U 6 HOH B 1 1001 31 HOH HOH . 
U 6 HOH B 2 1002 8 HOH HOH . 
U 6 HOH B 3 1003 46 HOH HOH . 
U 6 HOH B 4 1004 33 HOH HOH . 
U 6 HOH B 5 1005 14 HOH HOH . 
U 6 HOH B 6 1006 32 HOH HOH . 
U 6 HOH B 7 1007 9 HOH HOH . 
U 6 HOH B 8 1008 10 HOH HOH . 
U 6 HOH B 9 1009 45 HOH HOH . 
U 6 HOH B 10 1010 25 HOH HOH . 
U 6 HOH B 11 1011 16 HOH HOH . 
U 6 HOH B 12 1012 7 HOH HOH . 
U 6 HOH B 13 1013 35 HOH HOH . 
U 6 HOH B 14 1014 17 HOH HOH . 
U 6 HOH B 15 1015 15 HOH HOH . 
U 6 HOH B 16 1016 3 HOH HOH . 
V 6 HOH C 1 1001 42 HOH HOH . 
V 6 HOH C 2 1002 34 HOH HOH . 
V 6 HOH C 3 1003 40 HOH HOH . 
V 6 HOH C 4 1004 47 HOH HOH . 
V 6 HOH C 5 1005 48 HOH HOH . 
V 6 HOH C 6 1006 39 HOH HOH . 
V 6 HOH C 7 1007 41 HOH HOH . 
V 6 HOH C 8 1008 26 HOH HOH . 
V 6 HOH C 9 1009 18 HOH HOH . 
V 6 HOH C 10 1010 36 HOH HOH . 
V 6 HOH C 11 1011 19 HOH HOH . 
V 6 HOH C 12 1012 20 HOH HOH . 
V 6 HOH C 13 1013 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 29.982 33.545 7.091 1 93.82 ? C1 GOL 902 A 1 
HETATM 2 O O1 GOL . . . E 3 31.403 33.459 7.001 1 90.96 ? O1 GOL 902 A 1 
HETATM 3 C C2 GOL . . . E 3 29.429 32.669 8.199 1 94.78 ? C2 GOL 902 A 1 
HETATM 4 O O2 GOL . . . E 3 30.475 31.862 8.74 1 91.56 ? O2 GOL 902 A 1 
HETATM 5 C C3 GOL . . . E 3 28.752 33.453 9.312 1 92.56 ? C3 GOL 902 A 1 
HETATM 6 O O3 GOL . . . E 3 27.395 33.063 9.512 1 90.64 ? O3 GOL 902 A 1 
#
_model_server_stats.io_time_ms              89 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           6 
#