data_7A5L # _model_server_result.job_id In1M-tmJh2etj_R77EiHkA _model_server_result.datetime_utc '2024-11-27 08:24:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a5l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 7A5L # _exptl.entry_id 7A5L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.399 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[2-methyl-4-(thiophen-3-ylmethoxy)-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]pyridin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A5L _cell.length_a 81.75 _cell.length_b 81.75 _cell.length_c 123.871 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A5L _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 194 A GLN 320 1_555 A N PTR 195 A PTR 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale2 A C PTR 195 A PTR 321 1_555 A N ILE 196 A ILE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C17 H15 N5 O S' _chem_comp.formula_weight 337.399 _chem_comp.id QZW _chem_comp.mon_nstd_flag . _chem_comp.name 4-[2-methyl-4-(thiophen-3-ylmethoxy)-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]pyridin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N4 C16 QZW doub 306 n y N4 C15 QZW sing 307 n y N3 C15 QZW sing 308 n n C16 C17 QZW sing 309 n y C7 S1 QZW sing 310 n y C7 C8 QZW doub 311 n y C15 C14 QZW doub 312 n y S1 C6 QZW sing 313 n y C8 C5 QZW sing 314 n y C17 C13 QZW doub 315 n y C14 C13 QZW sing 316 n y C6 C5 QZW doub 317 n y C13 C12 QZW sing 318 n n C5 C4 QZW sing 319 n n C12 C11 QZW doub 320 n y C12 C9 QZW sing 321 n y O1 C4 QZW sing 322 n n O1 C3 QZW sing 323 n n C11 N2 QZW sing 324 n y C9 C3 QZW doub 325 n y C9 C10 QZW sing 326 n y C3 N1 QZW sing 327 n y N2 C10 QZW sing 328 n y C10 N5 QZW doub 329 n y N1 C2 QZW doub 330 n y C2 N5 QZW sing 331 n y C2 C1 QZW sing 332 n n C1 H1 QZW sing 333 n n C1 H2 QZW sing 334 n n C1 H3 QZW sing 335 n n N2 H4 QZW sing 336 n n N3 H5 QZW sing 337 n n N3 H6 QZW sing 338 n n C4 H7 QZW sing 339 n n C4 H8 QZW sing 340 n n C6 H9 QZW sing 341 n n C7 H10 QZW sing 342 n n C8 H11 QZW sing 343 n n C11 H12 QZW sing 344 n n C14 H13 QZW sing 345 n n C16 H14 QZW sing 346 n n C17 H15 QZW sing 347 n n # _atom_sites.entry_id 7A5L _atom_sites.fract_transf_matrix[1][1] 0.012232 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012232 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008073 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QZW A 1 501 1482 QZW UNL . C 3 CL A 1 502 1483 CL CL . D 4 HOH A 1 601 2193 HOH HOH . D 4 HOH A 2 602 2137 HOH HOH . D 4 HOH A 3 603 2168 HOH HOH . D 4 HOH A 4 604 2120 HOH HOH . D 4 HOH A 5 605 2202 HOH HOH . D 4 HOH A 6 606 2107 HOH HOH . D 4 HOH A 7 607 2093 HOH HOH . D 4 HOH A 8 608 2204 HOH HOH . D 4 HOH A 9 609 2068 HOH HOH . D 4 HOH A 10 610 2190 HOH HOH . D 4 HOH A 11 611 2064 HOH HOH . D 4 HOH A 12 612 2114 HOH HOH . D 4 HOH A 13 613 2165 HOH HOH . D 4 HOH A 14 614 2106 HOH HOH . D 4 HOH A 15 615 2066 HOH HOH . D 4 HOH A 16 616 2100 HOH HOH . D 4 HOH A 17 617 2108 HOH HOH . D 4 HOH A 18 618 2088 HOH HOH . D 4 HOH A 19 619 2126 HOH HOH . D 4 HOH A 20 620 2186 HOH HOH . D 4 HOH A 21 621 2195 HOH HOH . D 4 HOH A 22 622 2149 HOH HOH . D 4 HOH A 23 623 2023 HOH HOH . D 4 HOH A 24 624 2090 HOH HOH . D 4 HOH A 25 625 2067 HOH HOH . D 4 HOH A 26 626 2157 HOH HOH . D 4 HOH A 27 627 2189 HOH HOH . D 4 HOH A 28 628 2139 HOH HOH . D 4 HOH A 29 629 2065 HOH HOH . D 4 HOH A 30 630 2030 HOH HOH . D 4 HOH A 31 631 2019 HOH HOH . D 4 HOH A 32 632 2026 HOH HOH . D 4 HOH A 33 633 2103 HOH HOH . D 4 HOH A 34 634 2169 HOH HOH . D 4 HOH A 35 635 2016 HOH HOH . D 4 HOH A 36 636 2057 HOH HOH . D 4 HOH A 37 637 2192 HOH HOH . D 4 HOH A 38 638 2040 HOH HOH . D 4 HOH A 39 639 2130 HOH HOH . D 4 HOH A 40 640 2095 HOH HOH . D 4 HOH A 41 641 2069 HOH HOH . D 4 HOH A 42 642 2049 HOH HOH . D 4 HOH A 43 643 2048 HOH HOH . D 4 HOH A 44 644 2077 HOH HOH . D 4 HOH A 45 645 2055 HOH HOH . D 4 HOH A 46 646 2081 HOH HOH . D 4 HOH A 47 647 2061 HOH HOH . D 4 HOH A 48 648 2033 HOH HOH . D 4 HOH A 49 649 2142 HOH HOH . D 4 HOH A 50 650 2038 HOH HOH . D 4 HOH A 51 651 2012 HOH HOH . D 4 HOH A 52 652 2004 HOH HOH . D 4 HOH A 53 653 2089 HOH HOH . D 4 HOH A 54 654 2028 HOH HOH . D 4 HOH A 55 655 2074 HOH HOH . D 4 HOH A 56 656 2007 HOH HOH . D 4 HOH A 57 657 2072 HOH HOH . D 4 HOH A 58 658 2150 HOH HOH . D 4 HOH A 59 659 2017 HOH HOH . D 4 HOH A 60 660 2101 HOH HOH . D 4 HOH A 61 661 2082 HOH HOH . D 4 HOH A 62 662 2006 HOH HOH . D 4 HOH A 63 663 2032 HOH HOH . D 4 HOH A 64 664 2136 HOH HOH . D 4 HOH A 65 665 2152 HOH HOH . D 4 HOH A 66 666 2052 HOH HOH . D 4 HOH A 67 667 2062 HOH HOH . D 4 HOH A 68 668 2011 HOH HOH . D 4 HOH A 69 669 2045 HOH HOH . D 4 HOH A 70 670 2083 HOH HOH . D 4 HOH A 71 671 2021 HOH HOH . D 4 HOH A 72 672 2058 HOH HOH . D 4 HOH A 73 673 2164 HOH HOH . D 4 HOH A 74 674 2046 HOH HOH . D 4 HOH A 75 675 2133 HOH HOH . D 4 HOH A 76 676 2037 HOH HOH . D 4 HOH A 77 677 2005 HOH HOH . D 4 HOH A 78 678 2001 HOH HOH . D 4 HOH A 79 679 2102 HOH HOH . D 4 HOH A 80 680 2036 HOH HOH . D 4 HOH A 81 681 2092 HOH HOH . D 4 HOH A 82 682 2197 HOH HOH . D 4 HOH A 83 683 2008 HOH HOH . D 4 HOH A 84 684 2009 HOH HOH . D 4 HOH A 85 685 2054 HOH HOH . D 4 HOH A 86 686 2113 HOH HOH . D 4 HOH A 87 687 2002 HOH HOH . D 4 HOH A 88 688 2003 HOH HOH . D 4 HOH A 89 689 2053 HOH HOH . D 4 HOH A 90 690 2117 HOH HOH . D 4 HOH A 91 691 2166 HOH HOH . D 4 HOH A 92 692 2179 HOH HOH . D 4 HOH A 93 693 2022 HOH HOH . D 4 HOH A 94 694 2029 HOH HOH . D 4 HOH A 95 695 2024 HOH HOH . D 4 HOH A 96 696 2085 HOH HOH . D 4 HOH A 97 697 2031 HOH HOH . D 4 HOH A 98 698 2116 HOH HOH . D 4 HOH A 99 699 2128 HOH HOH . D 4 HOH A 100 700 2097 HOH HOH . D 4 HOH A 101 701 2163 HOH HOH . D 4 HOH A 102 702 2086 HOH HOH . D 4 HOH A 103 703 2091 HOH HOH . D 4 HOH A 104 704 2073 HOH HOH . D 4 HOH A 105 705 2076 HOH HOH . D 4 HOH A 106 706 2043 HOH HOH . D 4 HOH A 107 707 2191 HOH HOH . D 4 HOH A 108 708 2175 HOH HOH . D 4 HOH A 109 709 2173 HOH HOH . D 4 HOH A 110 710 2018 HOH HOH . D 4 HOH A 111 711 2063 HOH HOH . D 4 HOH A 112 712 2115 HOH HOH . D 4 HOH A 113 713 2035 HOH HOH . D 4 HOH A 114 714 2182 HOH HOH . D 4 HOH A 115 715 2079 HOH HOH . D 4 HOH A 116 716 2110 HOH HOH . D 4 HOH A 117 717 2098 HOH HOH . D 4 HOH A 118 718 2176 HOH HOH . D 4 HOH A 119 719 2105 HOH HOH . D 4 HOH A 120 720 2167 HOH HOH . D 4 HOH A 121 721 2178 HOH HOH . D 4 HOH A 122 722 2159 HOH HOH . D 4 HOH A 123 723 2087 HOH HOH . D 4 HOH A 124 724 2047 HOH HOH . D 4 HOH A 125 725 2143 HOH HOH . D 4 HOH A 126 726 2112 HOH HOH . D 4 HOH A 127 727 2147 HOH HOH . D 4 HOH A 128 728 2020 HOH HOH . D 4 HOH A 129 729 2075 HOH HOH . D 4 HOH A 130 730 2039 HOH HOH . D 4 HOH A 131 731 2145 HOH HOH . D 4 HOH A 132 732 2188 HOH HOH . D 4 HOH A 133 733 2099 HOH HOH . D 4 HOH A 134 734 2180 HOH HOH . D 4 HOH A 135 735 2044 HOH HOH . D 4 HOH A 136 736 2080 HOH HOH . D 4 HOH A 137 737 2196 HOH HOH . D 4 HOH A 138 738 2041 HOH HOH . D 4 HOH A 139 739 2025 HOH HOH . D 4 HOH A 140 740 2084 HOH HOH . D 4 HOH A 141 741 2158 HOH HOH . D 4 HOH A 142 742 2010 HOH HOH . D 4 HOH A 143 743 2198 HOH HOH . D 4 HOH A 144 744 2013 HOH HOH . D 4 HOH A 145 745 2050 HOH HOH . D 4 HOH A 146 746 2060 HOH HOH . D 4 HOH A 147 747 2184 HOH HOH . D 4 HOH A 148 748 2096 HOH HOH . D 4 HOH A 149 749 2056 HOH HOH . D 4 HOH A 150 750 2131 HOH HOH . D 4 HOH A 151 751 2127 HOH HOH . D 4 HOH A 152 752 2014 HOH HOH . D 4 HOH A 153 753 2201 HOH HOH . D 4 HOH A 154 754 2118 HOH HOH . D 4 HOH A 155 755 2027 HOH HOH . D 4 HOH A 156 756 2174 HOH HOH . D 4 HOH A 157 757 2078 HOH HOH . D 4 HOH A 158 758 2141 HOH HOH . D 4 HOH A 159 759 2160 HOH HOH . D 4 HOH A 160 760 2154 HOH HOH . D 4 HOH A 161 761 2138 HOH HOH . D 4 HOH A 162 762 2156 HOH HOH . D 4 HOH A 163 763 2104 HOH HOH . D 4 HOH A 164 764 2144 HOH HOH . D 4 HOH A 165 765 2015 HOH HOH . D 4 HOH A 166 766 2042 HOH HOH . D 4 HOH A 167 767 2059 HOH HOH . D 4 HOH A 168 768 2134 HOH HOH . D 4 HOH A 169 769 2148 HOH HOH . D 4 HOH A 170 770 2199 HOH HOH . D 4 HOH A 171 771 2070 HOH HOH . D 4 HOH A 172 772 2119 HOH HOH . D 4 HOH A 173 773 2155 HOH HOH . D 4 HOH A 174 774 2135 HOH HOH . D 4 HOH A 175 775 2071 HOH HOH . D 4 HOH A 176 776 2171 HOH HOH . D 4 HOH A 177 777 2123 HOH HOH . D 4 HOH A 178 778 2172 HOH HOH . D 4 HOH A 179 779 2111 HOH HOH . D 4 HOH A 180 780 2140 HOH HOH . D 4 HOH A 181 781 2146 HOH HOH . D 4 HOH A 182 782 2051 HOH HOH . D 4 HOH A 183 783 2187 HOH HOH . D 4 HOH A 184 784 2151 HOH HOH . D 4 HOH A 185 785 2153 HOH HOH . D 4 HOH A 186 786 2181 HOH HOH . D 4 HOH A 187 787 2185 HOH HOH . D 4 HOH A 188 788 2194 HOH HOH . D 4 HOH A 189 789 2177 HOH HOH . D 4 HOH A 190 790 2034 HOH HOH . D 4 HOH A 191 791 2132 HOH HOH . D 4 HOH A 192 792 2124 HOH HOH . D 4 HOH A 193 793 2161 HOH HOH . D 4 HOH A 194 794 2122 HOH HOH . D 4 HOH A 195 795 2109 HOH HOH . D 4 HOH A 196 796 2121 HOH HOH . D 4 HOH A 197 797 2125 HOH HOH . D 4 HOH A 198 798 2203 HOH HOH . D 4 HOH A 199 799 2183 HOH HOH . D 4 HOH A 200 800 2162 HOH HOH . D 4 HOH A 201 801 2129 HOH HOH . D 4 HOH A 202 802 2094 HOH HOH . D 4 HOH A 203 803 2200 HOH HOH . D 4 HOH A 204 804 2170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 QZW . . . B 2 44.94 3.7 18.362 1 20.43 ? C1 QZW 501 A 1 HETATM 2 N N1 QZW . . . B 2 44.036 3.606 16.103 1 22.47 ? N1 QZW 501 A 1 HETATM 3 O O1 QZW . . . B 2 43.174 3.46 13.963 1 26.37 ? O1 QZW 501 A 1 HETATM 4 S S1 QZW . . . B 2 43.875 0.03 10.721 1 40.37 ? S1 QZW 501 A 1 HETATM 5 C C2 QZW . . . B 2 44.421 4.371 17.138 1 22.23 ? C2 QZW 501 A 1 HETATM 6 N N2 QZW . . . B 2 43.796 7.622 15.823 1 23.61 ? N2 QZW 501 A 1 HETATM 7 C C3 QZW . . . B 2 43.559 4.188 15.013 1 24.33 ? C3 QZW 501 A 1 HETATM 8 N N3 QZW . . . B 2 40.71 8.37 10.098 1 32.08 ? N3 QZW 501 A 1 HETATM 9 C C4 QZW . . . B 2 43.204 2.026 14.101 1 33.83 ? C4 QZW 501 A 1 HETATM 10 N N4 QZW . . . B 2 41.534 6.252 9.941 1 25.53 ? N4 QZW 501 A 1 HETATM 11 C C5 QZW . . . B 2 43.163 1.423 12.733 1 32.38 ? C5 QZW 501 A 1 HETATM 12 N N5 QZW . . . B 2 44.409 5.711 17.156 1 24.34 ? N5 QZW 501 A 1 HETATM 13 C C6 QZW . . . B 2 44.139 0.558 12.309 1 36.84 ? C6 QZW 501 A 1 HETATM 14 C C7 QZW . . . B 2 42.436 0.878 10.585 1 31.09 ? C7 QZW 501 A 1 HETATM 15 C C8 QZW . . . B 2 42.197 1.608 11.697 1 34.64 ? C8 QZW 501 A 1 HETATM 16 C C9 QZW . . . B 2 43.463 5.582 14.909 1 23.82 ? C9 QZW 501 A 1 HETATM 17 C C10 QZW . . . B 2 43.93 6.291 16.05 1 24.03 ? C10 QZW 501 A 1 HETATM 18 C C11 QZW . . . B 2 43.299 7.788 14.547 1 23.06 ? C11 QZW 501 A 1 HETATM 19 C C12 QZW . . . B 2 43.076 6.578 13.931 1 24.65 ? C12 QZW 501 A 1 HETATM 20 C C13 QZW . . . B 2 42.519 6.431 12.561 1 26.47 ? C13 QZW 501 A 1 HETATM 21 C C14 QZW . . . B 2 41.88 7.503 11.954 1 25.65 ? C14 QZW 501 A 1 HETATM 22 C C15 QZW . . . B 2 41.398 7.375 10.657 1 28.18 ? C15 QZW 501 A 1 HETATM 23 C C16 QZW . . . B 2 42.17 5.224 10.514 1 27.21 ? C16 QZW 501 A 1 HETATM 24 C C17 QZW . . . B 2 42.681 5.281 11.799 1 28.93 ? C17 QZW 501 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 24 #