data_7A5M # _model_server_result.job_id BmJiwQ0SGwO1z-6FffXIbQ _model_server_result.datetime_utc '2025-08-30 13:21:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a5m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 7A5M # _exptl.entry_id 7A5M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A5M _cell.length_a 35.15 _cell.length_b 61.36 _cell.length_c 88.94 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A5M _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ACE 1 B ACE 1 1_555 B N 2L5 2 B 2L5 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.339 ? covale ? covale2 B C ACE 1 B ACE 1 1_555 B N 2L5 2 B 2L5 2 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.304 ? covale ? covale3 B C 2L5 2 B 2L5 2 1_555 B N 2L6 3 B 2L6 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C 2L5 2 B 2L5 2 1_555 B N 2L6 3 B 2L6 3 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.35 ? covale ? covale5 B C 2L6 3 B 2L6 3 1_555 B NBF JQ0 4 B JQ0 4 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.336 ? covale ? covale6 B C 2L6 3 B 2L6 3 1_555 B NBF JQ0 4 B JQ0 4 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.342 ? covale ? covale7 C C ACE 1 C ACE 1 1_555 C N 2L5 2 C 2L5 2 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.337 ? covale ? covale8 C C ACE 1 C ACE 1 1_555 C N 2L5 2 C 2L5 2 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.323 ? covale ? covale9 C C 2L5 2 C 2L5 2 1_555 C N 2L6 3 C 2L6 3 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.35 ? covale ? covale10 C C 2L5 2 C 2L5 2 1_555 C N 2L6 3 C 2L6 3 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale11 C C 2L5 2 C 2L5 2 1_555 C N 2L6 3 C 2L6 3 1_555 ? C ? ? C ? ? ? ? ? ? ? 1.342 ? covale ? covale12 C C 2L6 3 C 2L6 3 1_555 C NBF JQ0 4 C JQ0 4 1_555 ? A ? ? A ? ? ? ? ? ? ? 1.346 ? covale ? covale13 C C 2L6 3 C 2L6 3 1_555 C NBF JQ0 4 C JQ0 4 1_555 ? B ? ? B ? ? ? ? ? ? ? 1.337 ? covale ? covale14 C C 2L6 3 C 2L6 3 1_555 C NBF JQ0 4 C JQ0 4 1_555 ? C ? ? C ? ? ? ? ? ? ? 1.369 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 346 n n N O2 NO3 sing 347 n n N O3 NO3 sing 348 n n # _atom_sites.entry_id 7A5M _atom_sites.fract_transf_matrix[1][1] 0.02845 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016297 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 NO3 A 1 201 1 NO3 NO3 . E 4 HOH A 1 301 91 HOH HOH . E 4 HOH A 2 302 155 HOH HOH . E 4 HOH A 3 303 174 HOH HOH . E 4 HOH A 4 304 87 HOH HOH . E 4 HOH A 5 305 29 HOH HOH . E 4 HOH A 6 306 20 HOH HOH . E 4 HOH A 7 307 71 HOH HOH . E 4 HOH A 8 308 121 HOH HOH . E 4 HOH A 9 309 175 HOH HOH . E 4 HOH A 10 310 183 HOH HOH . E 4 HOH A 11 311 136 HOH HOH . E 4 HOH A 12 312 162 HOH HOH . E 4 HOH A 13 313 41 HOH HOH . E 4 HOH A 14 314 119 HOH HOH . E 4 HOH A 15 315 75 HOH HOH . E 4 HOH A 16 316 73 HOH HOH . E 4 HOH A 17 317 161 HOH HOH . E 4 HOH A 18 318 39 HOH HOH . E 4 HOH A 19 319 28 HOH HOH . E 4 HOH A 20 320 85 HOH HOH . E 4 HOH A 21 321 17 HOH HOH . E 4 HOH A 22 322 52 HOH HOH . E 4 HOH A 23 323 16 HOH HOH . E 4 HOH A 24 324 193 HOH HOH . E 4 HOH A 25 325 107 HOH HOH . E 4 HOH A 26 326 2 HOH HOH . E 4 HOH A 27 327 6 HOH HOH . E 4 HOH A 28 328 46 HOH HOH . E 4 HOH A 29 329 124 HOH HOH . E 4 HOH A 30 330 56 HOH HOH . E 4 HOH A 31 331 9 HOH HOH . E 4 HOH A 32 332 202 HOH HOH . E 4 HOH A 33 333 19 HOH HOH . E 4 HOH A 34 334 12 HOH HOH . E 4 HOH A 35 335 44 HOH HOH . E 4 HOH A 36 336 116 HOH HOH . E 4 HOH A 37 337 186 HOH HOH . E 4 HOH A 38 338 98 HOH HOH . E 4 HOH A 39 339 11 HOH HOH . E 4 HOH A 40 340 59 HOH HOH . E 4 HOH A 41 341 94 HOH HOH . E 4 HOH A 42 342 112 HOH HOH . E 4 HOH A 43 343 23 HOH HOH . E 4 HOH A 44 344 90 HOH HOH . E 4 HOH A 45 345 49 HOH HOH . E 4 HOH A 46 346 156 HOH HOH . E 4 HOH A 47 347 66 HOH HOH . E 4 HOH A 48 348 18 HOH HOH . E 4 HOH A 49 349 25 HOH HOH . E 4 HOH A 50 350 142 HOH HOH . E 4 HOH A 51 351 160 HOH HOH . E 4 HOH A 52 352 32 HOH HOH . E 4 HOH A 53 353 31 HOH HOH . E 4 HOH A 54 354 37 HOH HOH . E 4 HOH A 55 355 68 HOH HOH . E 4 HOH A 56 356 1 HOH HOH . E 4 HOH A 57 357 58 HOH HOH . E 4 HOH A 58 358 164 HOH HOH . E 4 HOH A 59 359 154 HOH HOH . E 4 HOH A 60 360 111 HOH HOH . E 4 HOH A 61 361 74 HOH HOH . E 4 HOH A 62 362 113 HOH HOH . E 4 HOH A 63 363 110 HOH HOH . E 4 HOH A 64 364 10 HOH HOH . E 4 HOH A 65 365 15 HOH HOH . E 4 HOH A 66 366 54 HOH HOH . E 4 HOH A 67 367 122 HOH HOH . E 4 HOH A 68 368 45 HOH HOH . E 4 HOH A 69 369 88 HOH HOH . E 4 HOH A 70 370 189 HOH HOH . E 4 HOH A 71 371 151 HOH HOH . E 4 HOH A 72 372 114 HOH HOH . E 4 HOH A 73 373 27 HOH HOH . E 4 HOH A 74 374 47 HOH HOH . E 4 HOH A 75 375 5 HOH HOH . E 4 HOH A 76 376 82 HOH HOH . E 4 HOH A 77 377 22 HOH HOH . E 4 HOH A 78 378 138 HOH HOH . E 4 HOH A 79 379 64 HOH HOH . E 4 HOH A 80 380 40 HOH HOH . E 4 HOH A 81 381 50 HOH HOH . E 4 HOH A 82 382 95 HOH HOH . E 4 HOH A 83 383 42 HOH HOH . E 4 HOH A 84 384 83 HOH HOH . E 4 HOH A 85 385 8 HOH HOH . E 4 HOH A 86 386 13 HOH HOH . E 4 HOH A 87 387 152 HOH HOH . E 4 HOH A 88 388 96 HOH HOH . E 4 HOH A 89 389 4 HOH HOH . E 4 HOH A 90 390 36 HOH HOH . E 4 HOH A 91 391 159 HOH HOH . E 4 HOH A 92 392 84 HOH HOH . E 4 HOH A 93 393 67 HOH HOH . E 4 HOH A 94 394 53 HOH HOH . E 4 HOH A 95 395 203 HOH HOH . E 4 HOH A 96 396 3 HOH HOH . E 4 HOH A 97 397 115 HOH HOH . E 4 HOH A 98 398 34 HOH HOH . E 4 HOH A 99 399 14 HOH HOH . E 4 HOH A 100 400 86 HOH HOH . E 4 HOH A 101 401 35 HOH HOH . E 4 HOH A 102 402 81 HOH HOH . E 4 HOH A 103 403 145 HOH HOH . E 4 HOH A 104 404 55 HOH HOH . E 4 HOH A 105 405 24 HOH HOH . E 4 HOH A 106 406 51 HOH HOH . E 4 HOH A 107 407 78 HOH HOH . E 4 HOH A 108 408 26 HOH HOH . E 4 HOH A 109 409 178 HOH HOH . E 4 HOH A 110 410 60 HOH HOH . E 4 HOH A 111 411 158 HOH HOH . E 4 HOH A 112 412 62 HOH HOH . E 4 HOH A 113 413 184 HOH HOH . E 4 HOH A 114 414 191 HOH HOH . E 4 HOH A 115 415 105 HOH HOH . E 4 HOH A 116 416 99 HOH HOH . E 4 HOH A 117 417 57 HOH HOH . E 4 HOH A 118 418 199 HOH HOH . E 4 HOH A 119 419 197 HOH HOH . E 4 HOH A 120 420 128 HOH HOH . E 4 HOH A 121 421 63 HOH HOH . E 4 HOH A 122 422 168 HOH HOH . E 4 HOH A 123 423 77 HOH HOH . E 4 HOH A 124 424 133 HOH HOH . E 4 HOH A 125 425 108 HOH HOH . E 4 HOH A 126 426 169 HOH HOH . E 4 HOH A 127 427 163 HOH HOH . E 4 HOH A 128 428 80 HOH HOH . E 4 HOH A 129 429 43 HOH HOH . E 4 HOH A 130 430 118 HOH HOH . E 4 HOH A 131 431 65 HOH HOH . E 4 HOH A 132 432 180 HOH HOH . E 4 HOH A 133 433 92 HOH HOH . E 4 HOH A 134 434 126 HOH HOH . E 4 HOH A 135 435 33 HOH HOH . E 4 HOH A 136 436 201 HOH HOH . E 4 HOH A 137 437 97 HOH HOH . E 4 HOH A 138 438 104 HOH HOH . E 4 HOH A 139 439 137 HOH HOH . E 4 HOH A 140 440 38 HOH HOH . E 4 HOH A 141 441 135 HOH HOH . E 4 HOH A 142 442 179 HOH HOH . E 4 HOH A 143 443 103 HOH HOH . E 4 HOH A 144 444 89 HOH HOH . E 4 HOH A 145 445 166 HOH HOH . E 4 HOH A 146 446 30 HOH HOH . E 4 HOH A 147 447 130 HOH HOH . E 4 HOH A 148 448 127 HOH HOH . E 4 HOH A 149 449 146 HOH HOH . E 4 HOH A 150 450 192 HOH HOH . E 4 HOH A 151 451 117 HOH HOH . E 4 HOH A 152 452 100 HOH HOH . E 4 HOH A 153 453 196 HOH HOH . E 4 HOH A 154 454 176 HOH HOH . E 4 HOH A 155 455 147 HOH HOH . F 4 HOH B 1 101 69 HOH HOH . F 4 HOH B 2 102 21 HOH HOH . F 4 HOH B 3 103 185 HOH HOH . F 4 HOH B 4 104 79 HOH HOH . F 4 HOH B 5 105 70 HOH HOH . F 4 HOH B 6 106 7 HOH HOH . F 4 HOH B 7 107 48 HOH HOH . F 4 HOH B 8 108 141 HOH HOH . G 4 HOH C 1 101 171 HOH HOH . G 4 HOH C 2 102 134 HOH HOH . G 4 HOH C 3 103 182 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . A . D 3 -21.475 -14.488 4.425 0.62 30.86 ? N NO3 201 A 1 HETATM 2 N N NO3 . B . D 3 -21.869 -13.712 4.474 0.38 15.95 ? N NO3 201 A 1 HETATM 3 O O1 NO3 . A . D 3 -22.366 -13.783 4.983 0.62 34.37 ? O1 NO3 201 A 1 HETATM 4 O O1 NO3 . B . D 3 -21.045 -14.544 4.074 0.38 16.37 ? O1 NO3 201 A 1 HETATM 5 O O2 NO3 . A . D 3 -20.752 -13.955 3.574 0.62 27.43 ? O2 NO3 201 A 1 HETATM 6 O O2 NO3 . B . D 3 -22.17 -13.718 5.675 0.38 17.29 ? O2 NO3 201 A 1 HETATM 7 O O3 NO3 . A . D 3 -21.319 -15.713 4.699 0.62 31.44 ? O3 NO3 201 A 1 HETATM 8 O O3 NO3 . B . D 3 -22.435 -12.88 3.706 0.38 15.6 ? O3 NO3 201 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 582 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #