data_7A5W # _model_server_result.job_id XyoenSL3GL-cH6mm0lpIrA _model_server_result.datetime_utc '2024-11-24 18:02:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a5w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7A5W # _exptl.entry_id 7A5W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A5W _cell.length_a 54.028 _cell.length_b 54.469 _cell.length_c 78.78 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A5W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 259 A THR 286 1_555 A N OCS 260 A OCS 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C OCS 260 A OCS 287 1_555 A N VAL 261 A VAL 288 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 7A5W _atom_sites.fract_transf_matrix[1][1] 0.018509 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018359 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 301 301 EDO EDO . C 2 EDO A 1 302 401 EDO EDO . D 2 EDO A 1 303 601 EDO EDO . E 2 EDO A 1 304 701 EDO EDO . F 2 EDO A 1 305 801 EDO EDO . G 3 HOH A 1 401 28 HOH HOH . G 3 HOH A 2 402 3 HOH HOH . G 3 HOH A 3 403 131 HOH HOH . G 3 HOH A 4 404 48 HOH HOH . G 3 HOH A 5 405 54 HOH HOH . G 3 HOH A 6 406 150 HOH HOH . G 3 HOH A 7 407 45 HOH HOH . G 3 HOH A 8 408 56 HOH HOH . G 3 HOH A 9 409 103 HOH HOH . G 3 HOH A 10 410 37 HOH HOH . G 3 HOH A 11 411 105 HOH HOH . G 3 HOH A 12 412 116 HOH HOH . G 3 HOH A 13 413 172 HOH HOH . G 3 HOH A 14 414 96 HOH HOH . G 3 HOH A 15 415 15 HOH HOH . G 3 HOH A 16 416 5 HOH HOH . G 3 HOH A 17 417 32 HOH HOH . G 3 HOH A 18 418 65 HOH HOH . G 3 HOH A 19 419 92 HOH HOH . G 3 HOH A 20 420 118 HOH HOH . G 3 HOH A 21 421 24 HOH HOH . G 3 HOH A 22 422 83 HOH HOH . G 3 HOH A 23 423 35 HOH HOH . G 3 HOH A 24 424 168 HOH HOH . G 3 HOH A 25 425 112 HOH HOH . G 3 HOH A 26 426 119 HOH HOH . G 3 HOH A 27 427 7 HOH HOH . G 3 HOH A 28 428 49 HOH HOH . G 3 HOH A 29 429 27 HOH HOH . G 3 HOH A 30 430 31 HOH HOH . G 3 HOH A 31 431 85 HOH HOH . G 3 HOH A 32 432 87 HOH HOH . G 3 HOH A 33 433 55 HOH HOH . G 3 HOH A 34 434 89 HOH HOH . G 3 HOH A 35 435 61 HOH HOH . G 3 HOH A 36 436 47 HOH HOH . G 3 HOH A 37 437 121 HOH HOH . G 3 HOH A 38 438 14 HOH HOH . G 3 HOH A 39 439 60 HOH HOH . G 3 HOH A 40 440 42 HOH HOH . G 3 HOH A 41 441 124 HOH HOH . G 3 HOH A 42 442 39 HOH HOH . G 3 HOH A 43 443 80 HOH HOH . G 3 HOH A 44 444 78 HOH HOH . G 3 HOH A 45 445 33 HOH HOH . G 3 HOH A 46 446 30 HOH HOH . G 3 HOH A 47 447 90 HOH HOH . G 3 HOH A 48 448 2 HOH HOH . G 3 HOH A 49 449 66 HOH HOH . G 3 HOH A 50 450 68 HOH HOH . G 3 HOH A 51 451 137 HOH HOH . G 3 HOH A 52 452 20 HOH HOH . G 3 HOH A 53 453 52 HOH HOH . G 3 HOH A 54 454 38 HOH HOH . G 3 HOH A 55 455 165 HOH HOH . G 3 HOH A 56 456 94 HOH HOH . G 3 HOH A 57 457 57 HOH HOH . G 3 HOH A 58 458 117 HOH HOH . G 3 HOH A 59 459 18 HOH HOH . G 3 HOH A 60 460 111 HOH HOH . G 3 HOH A 61 461 6 HOH HOH . G 3 HOH A 62 462 132 HOH HOH . G 3 HOH A 63 463 1 HOH HOH . G 3 HOH A 64 464 9 HOH HOH . G 3 HOH A 65 465 11 HOH HOH . G 3 HOH A 66 466 4 HOH HOH . G 3 HOH A 67 467 169 HOH HOH . G 3 HOH A 68 468 25 HOH HOH . G 3 HOH A 69 469 63 HOH HOH . G 3 HOH A 70 470 106 HOH HOH . G 3 HOH A 71 471 114 HOH HOH . G 3 HOH A 72 472 43 HOH HOH . G 3 HOH A 73 473 123 HOH HOH . G 3 HOH A 74 474 101 HOH HOH . G 3 HOH A 75 475 41 HOH HOH . G 3 HOH A 76 476 98 HOH HOH . G 3 HOH A 77 477 113 HOH HOH . G 3 HOH A 78 478 156 HOH HOH . G 3 HOH A 79 479 91 HOH HOH . G 3 HOH A 80 480 84 HOH HOH . G 3 HOH A 81 481 71 HOH HOH . G 3 HOH A 82 482 134 HOH HOH . G 3 HOH A 83 483 16 HOH HOH . G 3 HOH A 84 484 159 HOH HOH . G 3 HOH A 85 485 82 HOH HOH . G 3 HOH A 86 486 17 HOH HOH . G 3 HOH A 87 487 8 HOH HOH . G 3 HOH A 88 488 142 HOH HOH . G 3 HOH A 89 489 100 HOH HOH . G 3 HOH A 90 490 62 HOH HOH . G 3 HOH A 91 491 74 HOH HOH . G 3 HOH A 92 492 13 HOH HOH . G 3 HOH A 93 493 107 HOH HOH . G 3 HOH A 94 494 29 HOH HOH . G 3 HOH A 95 495 53 HOH HOH . G 3 HOH A 96 496 26 HOH HOH . G 3 HOH A 97 497 143 HOH HOH . G 3 HOH A 98 498 167 HOH HOH . G 3 HOH A 99 499 81 HOH HOH . G 3 HOH A 100 500 19 HOH HOH . G 3 HOH A 101 501 40 HOH HOH . G 3 HOH A 102 502 72 HOH HOH . G 3 HOH A 103 503 59 HOH HOH . G 3 HOH A 104 504 146 HOH HOH . G 3 HOH A 105 505 109 HOH HOH . G 3 HOH A 106 506 51 HOH HOH . G 3 HOH A 107 507 95 HOH HOH . G 3 HOH A 108 508 161 HOH HOH . G 3 HOH A 109 509 130 HOH HOH . G 3 HOH A 110 510 99 HOH HOH . G 3 HOH A 111 511 86 HOH HOH . G 3 HOH A 112 512 76 HOH HOH . G 3 HOH A 113 513 67 HOH HOH . G 3 HOH A 114 514 21 HOH HOH . G 3 HOH A 115 515 36 HOH HOH . G 3 HOH A 116 516 23 HOH HOH . G 3 HOH A 117 517 79 HOH HOH . G 3 HOH A 118 518 97 HOH HOH . G 3 HOH A 119 519 12 HOH HOH . G 3 HOH A 120 520 73 HOH HOH . G 3 HOH A 121 521 10 HOH HOH . G 3 HOH A 122 522 69 HOH HOH . G 3 HOH A 123 523 108 HOH HOH . G 3 HOH A 124 524 145 HOH HOH . G 3 HOH A 125 525 158 HOH HOH . G 3 HOH A 126 526 149 HOH HOH . G 3 HOH A 127 527 77 HOH HOH . G 3 HOH A 128 528 22 HOH HOH . G 3 HOH A 129 529 104 HOH HOH . G 3 HOH A 130 530 70 HOH HOH . G 3 HOH A 131 531 160 HOH HOH . G 3 HOH A 132 532 135 HOH HOH . G 3 HOH A 133 533 120 HOH HOH . G 3 HOH A 134 534 129 HOH HOH . G 3 HOH A 135 535 64 HOH HOH . G 3 HOH A 136 536 170 HOH HOH . G 3 HOH A 137 537 115 HOH HOH . G 3 HOH A 138 538 75 HOH HOH . G 3 HOH A 139 539 88 HOH HOH . G 3 HOH A 140 540 148 HOH HOH . G 3 HOH A 141 541 140 HOH HOH . G 3 HOH A 142 542 155 HOH HOH . G 3 HOH A 143 543 44 HOH HOH . G 3 HOH A 144 544 147 HOH HOH . G 3 HOH A 145 545 122 HOH HOH . G 3 HOH A 146 546 151 HOH HOH . G 3 HOH A 147 547 154 HOH HOH . G 3 HOH A 148 548 102 HOH HOH . G 3 HOH A 149 549 163 HOH HOH . G 3 HOH A 150 550 171 HOH HOH . G 3 HOH A 151 551 127 HOH HOH . G 3 HOH A 152 552 164 HOH HOH . G 3 HOH A 153 553 157 HOH HOH . G 3 HOH A 154 554 166 HOH HOH . G 3 HOH A 155 555 139 HOH HOH . G 3 HOH A 156 556 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 3.467 -16.916 11.5 1 24.68 ? C1 EDO 301 A 1 HETATM 2 O O1 EDO . . . B 2 3.559 -15.642 12.238 1 23.79 ? O1 EDO 301 A 1 HETATM 3 C C2 EDO . . . B 2 3.973 -18.157 12.158 1 26.16 ? C2 EDO 301 A 1 HETATM 4 O O2 EDO . . . B 2 3.666 -18.339 13.481 1 24.94 ? O2 EDO 301 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #