data_7A72 # _model_server_result.job_id BirBeAAcYHPYA4NCdVshCw _model_server_result.datetime_utc '2024-11-24 16:02:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a72 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 7A72 # _exptl.entry_id 7A72 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A72 _cell.length_a 53.488 _cell.length_b 54.658 _cell.length_c 78.202 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A72 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N ? 3 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 43 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 70 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C7 _struct_conn.ptnr2_label_comp_id TSL _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id TSL _struct_conn.ptnr2_auth_seq_id 501 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.382 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 7A72 _atom_sites.fract_transf_matrix[1][1] 0.018696 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018296 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012787 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TSL A 1 501 501 TSL TSL . C 3 GOL A 1 502 507 GOL GOL . D 4 ACT A 1 503 509 ACT ACT . E 3 GOL A 1 504 601 GOL GOL . F 3 GOL A 1 505 701 GOL GOL . G 5 HOH A 1 601 127 HOH HOH . G 5 HOH A 2 602 10 HOH HOH . G 5 HOH A 3 603 88 HOH HOH . G 5 HOH A 4 604 151 HOH HOH . G 5 HOH A 5 605 117 HOH HOH . G 5 HOH A 6 606 224 HOH HOH . G 5 HOH A 7 607 181 HOH HOH . G 5 HOH A 8 608 126 HOH HOH . G 5 HOH A 9 609 207 HOH HOH . G 5 HOH A 10 610 42 HOH HOH . G 5 HOH A 11 611 41 HOH HOH . G 5 HOH A 12 612 11 HOH HOH . G 5 HOH A 13 613 187 HOH HOH . G 5 HOH A 14 614 104 HOH HOH . G 5 HOH A 15 615 43 HOH HOH . G 5 HOH A 16 616 139 HOH HOH . G 5 HOH A 17 617 100 HOH HOH . G 5 HOH A 18 618 61 HOH HOH . G 5 HOH A 19 619 119 HOH HOH . G 5 HOH A 20 620 198 HOH HOH . G 5 HOH A 21 621 25 HOH HOH . G 5 HOH A 22 622 244 HOH HOH . G 5 HOH A 23 623 72 HOH HOH . G 5 HOH A 24 624 81 HOH HOH . G 5 HOH A 25 625 133 HOH HOH . G 5 HOH A 26 626 177 HOH HOH . G 5 HOH A 27 627 165 HOH HOH . G 5 HOH A 28 628 152 HOH HOH . G 5 HOH A 29 629 65 HOH HOH . G 5 HOH A 30 630 239 HOH HOH . G 5 HOH A 31 631 84 HOH HOH . G 5 HOH A 32 632 33 HOH HOH . G 5 HOH A 33 633 178 HOH HOH . G 5 HOH A 34 634 132 HOH HOH . G 5 HOH A 35 635 106 HOH HOH . G 5 HOH A 36 636 108 HOH HOH . G 5 HOH A 37 637 162 HOH HOH . G 5 HOH A 38 638 180 HOH HOH . G 5 HOH A 39 639 189 HOH HOH . G 5 HOH A 40 640 19 HOH HOH . G 5 HOH A 41 641 63 HOH HOH . G 5 HOH A 42 642 129 HOH HOH . G 5 HOH A 43 643 39 HOH HOH . G 5 HOH A 44 644 73 HOH HOH . G 5 HOH A 45 645 158 HOH HOH . G 5 HOH A 46 646 6 HOH HOH . G 5 HOH A 47 647 95 HOH HOH . G 5 HOH A 48 648 148 HOH HOH . G 5 HOH A 49 649 71 HOH HOH . G 5 HOH A 50 650 7 HOH HOH . G 5 HOH A 51 651 238 HOH HOH . G 5 HOH A 52 652 147 HOH HOH . G 5 HOH A 53 653 83 HOH HOH . G 5 HOH A 54 654 128 HOH HOH . G 5 HOH A 55 655 27 HOH HOH . G 5 HOH A 56 656 201 HOH HOH . G 5 HOH A 57 657 53 HOH HOH . G 5 HOH A 58 658 113 HOH HOH . G 5 HOH A 59 659 22 HOH HOH . G 5 HOH A 60 660 59 HOH HOH . G 5 HOH A 61 661 203 HOH HOH . G 5 HOH A 62 662 159 HOH HOH . G 5 HOH A 63 663 93 HOH HOH . G 5 HOH A 64 664 138 HOH HOH . G 5 HOH A 65 665 69 HOH HOH . G 5 HOH A 66 666 91 HOH HOH . G 5 HOH A 67 667 94 HOH HOH . G 5 HOH A 68 668 57 HOH HOH . G 5 HOH A 69 669 258 HOH HOH . G 5 HOH A 70 670 38 HOH HOH . G 5 HOH A 71 671 98 HOH HOH . G 5 HOH A 72 672 5 HOH HOH . G 5 HOH A 73 673 17 HOH HOH . G 5 HOH A 74 674 232 HOH HOH . G 5 HOH A 75 675 99 HOH HOH . G 5 HOH A 76 676 1 HOH HOH . G 5 HOH A 77 677 131 HOH HOH . G 5 HOH A 78 678 155 HOH HOH . G 5 HOH A 79 679 134 HOH HOH . G 5 HOH A 80 680 110 HOH HOH . G 5 HOH A 81 681 242 HOH HOH . G 5 HOH A 82 682 64 HOH HOH . G 5 HOH A 83 683 90 HOH HOH . G 5 HOH A 84 684 14 HOH HOH . G 5 HOH A 85 685 253 HOH HOH . G 5 HOH A 86 686 9 HOH HOH . G 5 HOH A 87 687 144 HOH HOH . G 5 HOH A 88 688 82 HOH HOH . G 5 HOH A 89 689 23 HOH HOH . G 5 HOH A 90 690 13 HOH HOH . G 5 HOH A 91 691 2 HOH HOH . G 5 HOH A 92 692 12 HOH HOH . G 5 HOH A 93 693 243 HOH HOH . G 5 HOH A 94 694 4 HOH HOH . G 5 HOH A 95 695 8 HOH HOH . G 5 HOH A 96 696 18 HOH HOH . G 5 HOH A 97 697 16 HOH HOH . G 5 HOH A 98 698 149 HOH HOH . G 5 HOH A 99 699 75 HOH HOH . G 5 HOH A 100 700 112 HOH HOH . G 5 HOH A 101 701 121 HOH HOH . G 5 HOH A 102 702 15 HOH HOH . G 5 HOH A 103 703 169 HOH HOH . G 5 HOH A 104 704 46 HOH HOH . G 5 HOH A 105 705 204 HOH HOH . G 5 HOH A 106 706 122 HOH HOH . G 5 HOH A 107 707 115 HOH HOH . G 5 HOH A 108 708 130 HOH HOH . G 5 HOH A 109 709 78 HOH HOH . G 5 HOH A 110 710 140 HOH HOH . G 5 HOH A 111 711 32 HOH HOH . G 5 HOH A 112 712 77 HOH HOH . G 5 HOH A 113 713 241 HOH HOH . G 5 HOH A 114 714 31 HOH HOH . G 5 HOH A 115 715 111 HOH HOH . G 5 HOH A 116 716 92 HOH HOH . G 5 HOH A 117 717 44 HOH HOH . G 5 HOH A 118 718 51 HOH HOH . G 5 HOH A 119 719 20 HOH HOH . G 5 HOH A 120 720 255 HOH HOH . G 5 HOH A 121 721 246 HOH HOH . G 5 HOH A 122 722 24 HOH HOH . G 5 HOH A 123 723 28 HOH HOH . G 5 HOH A 124 724 86 HOH HOH . G 5 HOH A 125 725 49 HOH HOH . G 5 HOH A 126 726 114 HOH HOH . G 5 HOH A 127 727 157 HOH HOH . G 5 HOH A 128 728 37 HOH HOH . G 5 HOH A 129 729 89 HOH HOH . G 5 HOH A 130 730 212 HOH HOH . G 5 HOH A 131 731 240 HOH HOH . G 5 HOH A 132 732 29 HOH HOH . G 5 HOH A 133 733 160 HOH HOH . G 5 HOH A 134 734 216 HOH HOH . G 5 HOH A 135 735 35 HOH HOH . G 5 HOH A 136 736 58 HOH HOH . G 5 HOH A 137 737 170 HOH HOH . G 5 HOH A 138 738 118 HOH HOH . G 5 HOH A 139 739 161 HOH HOH . G 5 HOH A 140 740 21 HOH HOH . G 5 HOH A 141 741 76 HOH HOH . G 5 HOH A 142 742 62 HOH HOH . G 5 HOH A 143 743 47 HOH HOH . G 5 HOH A 144 744 3 HOH HOH . G 5 HOH A 145 745 67 HOH HOH . G 5 HOH A 146 746 60 HOH HOH . G 5 HOH A 147 747 55 HOH HOH . G 5 HOH A 148 748 101 HOH HOH . G 5 HOH A 149 749 103 HOH HOH . G 5 HOH A 150 750 48 HOH HOH . G 5 HOH A 151 751 107 HOH HOH . G 5 HOH A 152 752 173 HOH HOH . G 5 HOH A 153 753 259 HOH HOH . G 5 HOH A 154 754 193 HOH HOH . G 5 HOH A 155 755 52 HOH HOH . G 5 HOH A 156 756 248 HOH HOH . G 5 HOH A 157 757 79 HOH HOH . G 5 HOH A 158 758 109 HOH HOH . G 5 HOH A 159 759 40 HOH HOH . G 5 HOH A 160 760 34 HOH HOH . G 5 HOH A 161 761 54 HOH HOH . G 5 HOH A 162 762 143 HOH HOH . G 5 HOH A 163 763 245 HOH HOH . G 5 HOH A 164 764 182 HOH HOH . G 5 HOH A 165 765 230 HOH HOH . G 5 HOH A 166 766 50 HOH HOH . G 5 HOH A 167 767 30 HOH HOH . G 5 HOH A 168 768 26 HOH HOH . G 5 HOH A 169 769 175 HOH HOH . G 5 HOH A 170 770 125 HOH HOH . G 5 HOH A 171 771 209 HOH HOH . G 5 HOH A 172 772 124 HOH HOH . G 5 HOH A 173 773 184 HOH HOH . G 5 HOH A 174 774 222 HOH HOH . G 5 HOH A 175 775 45 HOH HOH . G 5 HOH A 176 776 186 HOH HOH . G 5 HOH A 177 777 87 HOH HOH . G 5 HOH A 178 778 202 HOH HOH . G 5 HOH A 179 779 166 HOH HOH . G 5 HOH A 180 780 68 HOH HOH . G 5 HOH A 181 781 254 HOH HOH . G 5 HOH A 182 782 97 HOH HOH . G 5 HOH A 183 783 136 HOH HOH . G 5 HOH A 184 784 56 HOH HOH . G 5 HOH A 185 785 249 HOH HOH . G 5 HOH A 186 786 214 HOH HOH . G 5 HOH A 187 787 192 HOH HOH . G 5 HOH A 188 788 172 HOH HOH . G 5 HOH A 189 789 219 HOH HOH . G 5 HOH A 190 790 102 HOH HOH . G 5 HOH A 191 791 221 HOH HOH . G 5 HOH A 192 792 247 HOH HOH . G 5 HOH A 193 793 150 HOH HOH . G 5 HOH A 194 794 164 HOH HOH . G 5 HOH A 195 795 188 HOH HOH . G 5 HOH A 196 796 80 HOH HOH . G 5 HOH A 197 797 257 HOH HOH . G 5 HOH A 198 798 206 HOH HOH . G 5 HOH A 199 799 145 HOH HOH . G 5 HOH A 200 800 142 HOH HOH . G 5 HOH A 201 801 171 HOH HOH . G 5 HOH A 202 802 96 HOH HOH . G 5 HOH A 203 803 105 HOH HOH . G 5 HOH A 204 804 163 HOH HOH . G 5 HOH A 205 805 137 HOH HOH . G 5 HOH A 206 806 156 HOH HOH . G 5 HOH A 207 807 251 HOH HOH . G 5 HOH A 208 808 236 HOH HOH . G 5 HOH A 209 809 120 HOH HOH . G 5 HOH A 210 810 146 HOH HOH . G 5 HOH A 211 811 185 HOH HOH . G 5 HOH A 212 812 168 HOH HOH . G 5 HOH A 213 813 250 HOH HOH . G 5 HOH A 214 814 234 HOH HOH . G 5 HOH A 215 815 167 HOH HOH . G 5 HOH A 216 816 66 HOH HOH . G 5 HOH A 217 817 218 HOH HOH . G 5 HOH A 218 818 235 HOH HOH . G 5 HOH A 219 819 191 HOH HOH . G 5 HOH A 220 820 85 HOH HOH . G 5 HOH A 221 821 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 14.94 10.777 6.629 1 24.4 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . C 3 16.275 10.552 6.173 1 29.89 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . C 3 14.857 10.485 8.109 1 18.88 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . C 3 15.261 9.12 8.318 1 20.48 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . C 3 15.691 11.415 8.979 1 22.55 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . C 3 15.299 12.787 8.883 1 20.42 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #