data_7A9C # _model_server_result.job_id xXOLPt9sGtFpklmx6bD1Ng _model_server_result.datetime_utc '2024-11-20 13:23:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 7A9C # _exptl.entry_id 7A9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.906 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'YTTRIUM (III) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A9C _cell.length_a 55.27 _cell.length_b 71.93 _cell.length_c 180.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 53 AAA CYS 53 1_555 A SG CYS 62 AAA CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 75 AAA CYS 75 1_555 A SG CYS 91 AAA CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 90 AAA CYS 90 1_555 A SG CYS 101 AAA CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 A SG CYS 124 AAA CYS 124 1_555 A SG CYS 169 AAA CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 A SG CYS 168 AAA CYS 168 1_555 A SG CYS 177 AAA CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf6 A SG CYS 200 AAA CYS 200 1_555 A SG CYS 246 AAA CYS 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf7 A SG CYS 245 AAA CYS 245 1_555 A SG CYS 253 AAA CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 A SG CYS 265 AAA CYS 265 1_555 A SG CYS 279 AAA CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf9 A SG CYS 278 AAA CYS 278 1_555 A SG CYS 289 AAA CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf10 A SG CYS 316 AAA CYS 316 1_555 A SG CYS 361 AAA CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf11 A SG CYS 360 AAA CYS 360 1_555 A SG CYS 369 AAA CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf12 A SG CYS 392 AAA CYS 392 1_555 A SG CYS 438 AAA CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf13 A SG CYS 437 AAA CYS 437 1_555 A SG CYS 448 AAA CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf14 A SG CYS 461 AAA CYS 461 1_555 A SG CYS 477 AAA CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf15 A SG CYS 476 AAA CYS 476 1_555 A SG CYS 487 AAA CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf16 A SG CYS 514 AAA CYS 514 1_555 A SG CYS 559 AAA CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf17 A SG CYS 558 AAA CYS 558 1_555 A SG CYS 567 AAA CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 A O HIS 128 AAA HIS 128 1_555 B Y YT3 . AAA YT3 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc2 A OE1 GLU 131 AAA GLU 131 1_555 B Y YT3 . AAA YT3 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc3 A OE2 GLU 131 AAA GLU 131 1_555 B Y YT3 . AAA YT3 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc4 A OE1 GLU 244 AAA GLU 244 1_555 C Y YT3 . AAA YT3 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.906 ? metalc ? metalc5 A OE1 GLU 252 AAA GLU 252 1_555 C Y YT3 . AAA YT3 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? metalc ? metalc6 A OE2 GLU 252 AAA GLU 252 1_555 C Y YT3 . AAA YT3 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc7 A OE1 GLU 277 AAA GLU 277 1_555 B Y YT3 . AAA YT3 601 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc8 A OE1 GLU 280 AAA GLU 280 1_555 B Y YT3 . AAA YT3 601 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc9 A OE2 GLU 280 AAA GLU 280 1_555 B Y YT3 . AAA YT3 601 4_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.982 ? metalc ? metalc10 A OE1 GLU 368 AAA GLU 368 1_555 C Y YT3 . AAA YT3 602 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc11 A OE2 GLU 368 AAA GLU 368 1_555 C Y YT3 . AAA YT3 602 3_455 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'Y 3' _chem_comp.formula_weight 88.906 _chem_comp.id YT3 _chem_comp.mon_nstd_flag . _chem_comp.name 'YTTRIUM (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7A9C _atom_sites.fract_transf_matrix[1][1] 0.018093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013902 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005552 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 YT3 AAA 1 601 601 YT3 YT3 . C 2 YT3 AAA 1 602 602 YT3 YT3 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol Y _atom_site.label_atom_id Y _atom_site.label_comp_id YT3 _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -13.395 _atom_site.Cartn_y -35.772 _atom_site.Cartn_z 30.051 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 116.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id Y _atom_site.auth_comp_id YT3 _atom_site.auth_seq_id 602 _atom_site.auth_asym_id AAA _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 691 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #