data_7A9Y # _model_server_result.job_id kNi5mTVLDkCYvnbJtSymdw _model_server_result.datetime_utc '2024-11-23 22:56:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7a9y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7A9Y # _exptl.entry_id 7A9Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 214.344 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-TRIDECANOIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7A9Y _cell.length_a 36.89 _cell.length_b 109.98 _cell.length_c 170.34 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7A9Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,E,G 1 1 A,C,D,F 1 2 A,C,D,F 2 1 B,E,G 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_655 x+1,y,z 1 0 0 0 1 0 0 0 1 36.89 0 0 3 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -36.89 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 29 _struct_conn.ptnr1_auth_asym_id BBB _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 29 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 29 _struct_conn.ptnr2_auth_asym_id AAA _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 29 _struct_conn.ptnr2_symmetry 1_455 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id B _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.068 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C13 H26 O2' _chem_comp.formula_weight 214.344 _chem_comp.id TDA _chem_comp.mon_nstd_flag . _chem_comp.name 'N-TRIDECANOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O21 C21 TDA sing 346 n n O21 H21 TDA sing 347 n n O22 C21 TDA doub 348 n n C21 C22 TDA sing 349 n n C22 C23 TDA sing 350 n n C22 H222 TDA sing 351 n n C22 H221 TDA sing 352 n n C23 C24 TDA sing 353 n n C23 H232 TDA sing 354 n n C23 H231 TDA sing 355 n n C24 C25 TDA sing 356 n n C24 H242 TDA sing 357 n n C24 H241 TDA sing 358 n n C25 C26 TDA sing 359 n n C25 H252 TDA sing 360 n n C25 H251 TDA sing 361 n n C26 C27 TDA sing 362 n n C26 H262 TDA sing 363 n n C26 H261 TDA sing 364 n n C27 C28 TDA sing 365 n n C27 H272 TDA sing 366 n n C27 H271 TDA sing 367 n n C28 C29 TDA sing 368 n n C28 H282 TDA sing 369 n n C28 H281 TDA sing 370 n n C29 C30 TDA sing 371 n n C29 H292 TDA sing 372 n n C29 H291 TDA sing 373 n n C30 C31 TDA sing 374 n n C30 H302 TDA sing 375 n n C30 H301 TDA sing 376 n n C31 C32 TDA sing 377 n n C31 H312 TDA sing 378 n n C31 H311 TDA sing 379 n n C32 C33 TDA sing 380 n n C32 H322 TDA sing 381 n n C32 H321 TDA sing 382 n n C33 H333 TDA sing 383 n n C33 H332 TDA sing 384 n n C33 H331 TDA sing 385 n n # _atom_sites.entry_id 7A9Y _atom_sites.fract_transf_matrix[1][1] 0.027108 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009093 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005871 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR BBB 1 201 201 MYR MYR . D 3 GOL BBB 1 202 301 GOL GOL . E 4 TDA AAA 1 201 201 TDA TDA . F 5 HOH BBB 1 301 99 HOH HOH . F 5 HOH BBB 2 302 45 HOH HOH . F 5 HOH BBB 3 303 1 HOH HOH . F 5 HOH BBB 4 304 81 HOH HOH . F 5 HOH BBB 5 305 161 HOH HOH . F 5 HOH BBB 6 306 63 HOH HOH . F 5 HOH BBB 7 307 61 HOH HOH . F 5 HOH BBB 8 308 106 HOH HOH . F 5 HOH BBB 9 309 102 HOH HOH . F 5 HOH BBB 10 310 7 HOH HOH . F 5 HOH BBB 11 311 138 HOH HOH . F 5 HOH BBB 12 312 50 HOH HOH . F 5 HOH BBB 13 313 55 HOH HOH . F 5 HOH BBB 14 314 75 HOH HOH . F 5 HOH BBB 15 315 18 HOH HOH . F 5 HOH BBB 16 316 124 HOH HOH . F 5 HOH BBB 17 317 56 HOH HOH . F 5 HOH BBB 18 318 11 HOH HOH . F 5 HOH BBB 19 319 13 HOH HOH . F 5 HOH BBB 20 320 87 HOH HOH . F 5 HOH BBB 21 321 108 HOH HOH . F 5 HOH BBB 22 322 143 HOH HOH . F 5 HOH BBB 23 323 23 HOH HOH . F 5 HOH BBB 24 324 125 HOH HOH . F 5 HOH BBB 25 325 74 HOH HOH . F 5 HOH BBB 26 326 39 HOH HOH . F 5 HOH BBB 27 327 104 HOH HOH . F 5 HOH BBB 28 328 120 HOH HOH . F 5 HOH BBB 29 329 103 HOH HOH . F 5 HOH BBB 30 330 73 HOH HOH . F 5 HOH BBB 31 331 30 HOH HOH . F 5 HOH BBB 32 332 48 HOH HOH . F 5 HOH BBB 33 333 59 HOH HOH . F 5 HOH BBB 34 334 136 HOH HOH . F 5 HOH BBB 35 335 69 HOH HOH . F 5 HOH BBB 36 336 144 HOH HOH . F 5 HOH BBB 37 337 137 HOH HOH . F 5 HOH BBB 38 338 94 HOH HOH . F 5 HOH BBB 39 339 58 HOH HOH . F 5 HOH BBB 40 340 145 HOH HOH . F 5 HOH BBB 41 341 29 HOH HOH . F 5 HOH BBB 42 342 26 HOH HOH . F 5 HOH BBB 43 343 10 HOH HOH . F 5 HOH BBB 44 344 47 HOH HOH . F 5 HOH BBB 45 345 119 HOH HOH . F 5 HOH BBB 46 346 79 HOH HOH . F 5 HOH BBB 47 347 91 HOH HOH . F 5 HOH BBB 48 348 25 HOH HOH . F 5 HOH BBB 49 349 95 HOH HOH . F 5 HOH BBB 50 350 129 HOH HOH . F 5 HOH BBB 51 351 146 HOH HOH . F 5 HOH BBB 52 352 141 HOH HOH . F 5 HOH BBB 53 353 142 HOH HOH . F 5 HOH BBB 54 354 41 HOH HOH . F 5 HOH BBB 55 355 123 HOH HOH . F 5 HOH BBB 56 356 32 HOH HOH . F 5 HOH BBB 57 357 110 HOH HOH . F 5 HOH BBB 58 358 128 HOH HOH . F 5 HOH BBB 59 359 111 HOH HOH . F 5 HOH BBB 60 360 131 HOH HOH . F 5 HOH BBB 61 361 147 HOH HOH . F 5 HOH BBB 62 362 107 HOH HOH . F 5 HOH BBB 63 363 36 HOH HOH . F 5 HOH BBB 64 364 151 HOH HOH . F 5 HOH BBB 65 365 22 HOH HOH . F 5 HOH BBB 66 366 52 HOH HOH . F 5 HOH BBB 67 367 92 HOH HOH . G 5 HOH AAA 1 301 154 HOH HOH . G 5 HOH AAA 2 302 51 HOH HOH . G 5 HOH AAA 3 303 149 HOH HOH . G 5 HOH AAA 4 304 20 HOH HOH . G 5 HOH AAA 5 305 98 HOH HOH . G 5 HOH AAA 6 306 83 HOH HOH . G 5 HOH AAA 7 307 155 HOH HOH . G 5 HOH AAA 8 308 76 HOH HOH . G 5 HOH AAA 9 309 2 HOH HOH . G 5 HOH AAA 10 310 42 HOH HOH . G 5 HOH AAA 11 311 135 HOH HOH . G 5 HOH AAA 12 312 57 HOH HOH . G 5 HOH AAA 13 313 80 HOH HOH . G 5 HOH AAA 14 314 34 HOH HOH . G 5 HOH AAA 15 315 54 HOH HOH . G 5 HOH AAA 16 316 24 HOH HOH . G 5 HOH AAA 17 317 88 HOH HOH . G 5 HOH AAA 18 318 96 HOH HOH . G 5 HOH AAA 19 319 31 HOH HOH . G 5 HOH AAA 20 320 16 HOH HOH . G 5 HOH AAA 21 321 114 HOH HOH . G 5 HOH AAA 22 322 3 HOH HOH . G 5 HOH AAA 23 323 86 HOH HOH . G 5 HOH AAA 24 324 4 HOH HOH . G 5 HOH AAA 25 325 132 HOH HOH . G 5 HOH AAA 26 326 118 HOH HOH . G 5 HOH AAA 27 327 17 HOH HOH . G 5 HOH AAA 28 328 19 HOH HOH . G 5 HOH AAA 29 329 21 HOH HOH . G 5 HOH AAA 30 330 93 HOH HOH . G 5 HOH AAA 31 331 9 HOH HOH . G 5 HOH AAA 32 332 68 HOH HOH . G 5 HOH AAA 33 333 85 HOH HOH . G 5 HOH AAA 34 334 8 HOH HOH . G 5 HOH AAA 35 335 121 HOH HOH . G 5 HOH AAA 36 336 78 HOH HOH . G 5 HOH AAA 37 337 84 HOH HOH . G 5 HOH AAA 38 338 15 HOH HOH . G 5 HOH AAA 39 339 77 HOH HOH . G 5 HOH AAA 40 340 40 HOH HOH . G 5 HOH AAA 41 341 159 HOH HOH . G 5 HOH AAA 42 342 53 HOH HOH . G 5 HOH AAA 43 343 101 HOH HOH . G 5 HOH AAA 44 344 117 HOH HOH . G 5 HOH AAA 45 345 70 HOH HOH . G 5 HOH AAA 46 346 158 HOH HOH . G 5 HOH AAA 47 347 44 HOH HOH . G 5 HOH AAA 48 348 71 HOH HOH . G 5 HOH AAA 49 349 126 HOH HOH . G 5 HOH AAA 50 350 14 HOH HOH . G 5 HOH AAA 51 351 6 HOH HOH . G 5 HOH AAA 52 352 12 HOH HOH . G 5 HOH AAA 53 353 5 HOH HOH . G 5 HOH AAA 54 354 46 HOH HOH . G 5 HOH AAA 55 355 64 HOH HOH . G 5 HOH AAA 56 356 67 HOH HOH . G 5 HOH AAA 57 357 112 HOH HOH . G 5 HOH AAA 58 358 43 HOH HOH . G 5 HOH AAA 59 359 49 HOH HOH . G 5 HOH AAA 60 360 152 HOH HOH . G 5 HOH AAA 61 361 60 HOH HOH . G 5 HOH AAA 62 362 38 HOH HOH . G 5 HOH AAA 63 363 100 HOH HOH . G 5 HOH AAA 64 364 140 HOH HOH . G 5 HOH AAA 65 365 66 HOH HOH . G 5 HOH AAA 66 366 33 HOH HOH . G 5 HOH AAA 67 367 28 HOH HOH . G 5 HOH AAA 68 368 157 HOH HOH . G 5 HOH AAA 69 369 116 HOH HOH . G 5 HOH AAA 70 370 65 HOH HOH . G 5 HOH AAA 71 371 115 HOH HOH . G 5 HOH AAA 72 372 62 HOH HOH . G 5 HOH AAA 73 373 37 HOH HOH . G 5 HOH AAA 74 374 150 HOH HOH . G 5 HOH AAA 75 375 90 HOH HOH . G 5 HOH AAA 76 376 109 HOH HOH . G 5 HOH AAA 77 377 105 HOH HOH . G 5 HOH AAA 78 378 148 HOH HOH . G 5 HOH AAA 79 379 82 HOH HOH . G 5 HOH AAA 80 380 160 HOH HOH . G 5 HOH AAA 81 381 27 HOH HOH . G 5 HOH AAA 82 382 156 HOH HOH . G 5 HOH AAA 83 383 122 HOH HOH . G 5 HOH AAA 84 384 97 HOH HOH . G 5 HOH AAA 85 385 133 HOH HOH . G 5 HOH AAA 86 386 72 HOH HOH . G 5 HOH AAA 87 387 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O21 TDA . . . E 4 -1.099 -33.782 -33.425 1 31.34 0 O21 TDA 201 AAA 1 HETATM 2 O O22 TDA . . . E 4 -0.02 -35.198 -34.629 1 32.35 0 O22 TDA 201 AAA 1 HETATM 3 C C21 TDA . . . E 4 -0.163 -34.513 -33.583 1 25.55 0 C21 TDA 201 AAA 1 HETATM 4 C C22 TDA . . . E 4 0.905 -34.592 -32.522 1 44.89 0 C22 TDA 201 AAA 1 HETATM 5 C C23 TDA . . . E 4 2.134 -33.778 -32.848 1 46.5 0 C23 TDA 201 AAA 1 HETATM 6 C C24 TDA . . . E 4 3.277 -34.073 -31.876 1 53.97 0 C24 TDA 201 AAA 1 HETATM 7 C C25 TDA . . . E 4 4.358 -33.029 -31.843 1 54.57 0 C25 TDA 201 AAA 1 HETATM 8 C C26 TDA . . . E 4 5.24 -33.038 -30.592 1 60.49 0 C26 TDA 201 AAA 1 HETATM 9 C C27 TDA . . . E 4 5.49 -34.409 -29.984 1 59.66 0 C27 TDA 201 AAA 1 HETATM 10 C C28 TDA . . . E 4 6.528 -34.442 -28.888 1 63.9 0 C28 TDA 201 AAA 1 HETATM 11 C C29 TDA . . . E 4 6.661 -35.784 -28.192 1 61.36 0 C29 TDA 201 AAA 1 HETATM 12 C C30 TDA . . . E 4 7.383 -35.746 -26.853 1 59.95 0 C30 TDA 201 AAA 1 HETATM 13 C C31 TDA . . . E 4 8.292 -36.92 -26.591 1 58.74 0 C31 TDA 201 AAA 1 HETATM 14 C C32 TDA . . . E 4 9.683 -36.567 -26.153 1 60.27 0 C32 TDA 201 AAA 1 HETATM 15 C C33 TDA . . . E 4 10.495 -37.768 -25.704 1 61.35 0 C33 TDA 201 AAA 1 HETATM 16 H H222 TDA . . . E 4 1.165 -35.532 -32.408 1 39.52 0 H222 TDA 201 AAA 1 HETATM 17 H H221 TDA . . . E 4 0.53 -34.282 -31.671 1 39.5 0 H221 TDA 201 AAA 1 HETATM 18 H H232 TDA . . . E 4 1.915 -32.824 -32.806 1 47.78 0 H232 TDA 201 AAA 1 HETATM 19 H H231 TDA . . . E 4 2.429 -33.981 -33.76 1 47.76 0 H231 TDA 201 AAA 1 HETATM 20 H H242 TDA . . . E 4 3.68 -34.934 -32.119 1 52.25 0 H242 TDA 201 AAA 1 HETATM 21 H H241 TDA . . . E 4 2.902 -34.164 -30.975 1 52.26 0 H241 TDA 201 AAA 1 HETATM 22 H H252 TDA . . . E 4 3.94 -32.145 -31.921 1 55.74 0 H252 TDA 201 AAA 1 HETATM 23 H H251 TDA . . . E 4 4.933 -33.152 -32.628 1 55.76 0 H251 TDA 201 AAA 1 HETATM 24 H H262 TDA . . . E 4 4.822 -32.471 -29.911 1 58.87 0 H262 TDA 201 AAA 1 HETATM 25 H H261 TDA . . . E 4 6.105 -32.636 -30.818 1 58.85 0 H261 TDA 201 AAA 1 HETATM 26 H H272 TDA . . . E 4 5.77 -35.021 -30.698 1 60.82 0 H272 TDA 201 AAA 1 HETATM 27 H H271 TDA . . . E 4 4.645 -34.749 -29.62 1 60.79 0 H271 TDA 201 AAA 1 HETATM 28 H H282 TDA . . . E 4 6.299 -33.762 -28.218 1 62.28 0 H282 TDA 201 AAA 1 HETATM 29 H H281 TDA . . . E 4 7.398 -34.199 -29.271 1 62.28 0 H281 TDA 201 AAA 1 HETATM 30 H H292 TDA . . . E 4 7.14 -36.396 -28.79 1 61.54 0 H292 TDA 201 AAA 1 HETATM 31 H H291 TDA . . . E 4 5.763 -36.152 -28.051 1 61.59 0 H291 TDA 201 AAA 1 HETATM 32 H H302 TDA . . . E 4 6.713 -35.704 -26.138 1 59.99 0 H302 TDA 201 AAA 1 HETATM 33 H H301 TDA . . . E 4 7.915 -34.922 -26.808 1 60 0 H301 TDA 201 AAA 1 HETATM 34 H H312 TDA . . . E 4 8.353 -37.459 -27.408 1 59.32 0 H312 TDA 201 AAA 1 HETATM 35 H H311 TDA . . . E 4 7.882 -37.481 -25.899 1 59.37 0 H311 TDA 201 AAA 1 HETATM 36 H H322 TDA . . . E 4 9.628 -35.924 -25.413 1 60.16 0 H322 TDA 201 AAA 1 HETATM 37 H H321 TDA . . . E 4 10.147 -36.128 -26.899 1 60.16 0 H321 TDA 201 AAA 1 HETATM 38 H H333 TDA . . . E 4 11.384 -37.478 -25.435 1 61.02 0 H333 TDA 201 AAA 1 HETATM 39 H H332 TDA . . . E 4 10.572 -38.403 -26.438 1 61.02 0 H332 TDA 201 AAA 1 HETATM 40 H H331 TDA . . . E 4 10.054 -38.197 -24.951 1 61.02 0 H331 TDA 201 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 40 #