data_7AAI
#
_model_server_result.job_id            VT3nxnxjCj0qRDgcVmTMLw 
_model_server_result.datetime_utc      '2024-11-28 16:29:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7aai 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":616}' 
#
_entry.id    7AAI 
#
_exptl.entry_id    7AAI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.954 
_cell.angle_gamma         90 
_cell.entry_id            7AAI 
_cell.length_a            184.788 
_cell.length_b            38.507 
_cell.length_c            95.588 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7AAI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 N N N 
? 7 O N N 
? 7 P N N 
? 7 Q N N 
? 7 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 52 AAA CYS 53 1_555 A SG CYS 61 AAA CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
disulf ? disulf2 A SG CYS 74 AAA CYS 75 1_555 A SG CYS 90 AAA CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf3 A SG CYS 89 AAA CYS 90 1_555 A SG CYS 100 AAA CYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf4 A SG CYS 123 AAA CYS 124 1_555 A SG CYS 168 AAA CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf5 A SG CYS 167 AAA CYS 168 1_555 A SG CYS 176 AAA CYS 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf6 A SG CYS 244 AAA CYS 245 1_555 A SG CYS 252 AAA CYS 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
disulf ? disulf7 A SG CYS 264 AAA CYS 265 1_555 A SG CYS 278 AAA CYS 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf8 A SG CYS 277 AAA CYS 278 1_555 A SG CYS 288 AAA CYS 289 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf9 A SG CYS 315 AAA CYS 316 1_555 A SG CYS 360 AAA CYS 361 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf10 A SG CYS 359 AAA CYS 360 1_555 A SG CYS 368 AAA CYS 369 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? 
disulf ? disulf11 A SG CYS 391 AAA CYS 392 1_555 A SG CYS 437 AAA CYS 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf12 A SG CYS 436 AAA CYS 437 1_555 A SG CYS 447 AAA CYS 448 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf13 A SG CYS 460 AAA CYS 461 1_555 A SG CYS 476 AAA CYS 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf14 A SG CYS 475 AAA CYS 476 1_555 A SG CYS 486 AAA CYS 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
disulf ? disulf15 A SG CYS 513 AAA CYS 514 1_555 A SG CYS 558 AAA CYS 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? 
disulf ? disulf16 A SG CYS 557 AAA CYS 558 1_555 A SG CYS 566 AAA CYS 567 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 271 n n 
C1 H11 MPD sing 272 n n 
C1 H12 MPD sing 273 n n 
C1 H13 MPD sing 274 n n 
C2 O2 MPD sing 275 n n 
C2 CM MPD sing 276 n n 
C2 C3 MPD sing 277 n n 
O2 HO2 MPD sing 278 n n 
CM HM1 MPD sing 279 n n 
CM HM2 MPD sing 280 n n 
CM HM3 MPD sing 281 n n 
C3 C4 MPD sing 282 n n 
C3 H31 MPD sing 283 n n 
C3 H32 MPD sing 284 n n 
C4 O4 MPD sing 285 n n 
C4 C5 MPD sing 286 n n 
C4 H4 MPD sing 287 n n 
O4 HO4 MPD sing 288 n n 
C5 H51 MPD sing 289 n n 
C5 H52 MPD sing 290 n n 
C5 H53 MPD sing 291 n n 
#
_atom_sites.entry_id                     7AAI 
_atom_sites.fract_transf_matrix[1][1]    0.005412 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001445 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025969 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010828 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 8PF AAA 1 601 1 8PF PFO . 
C 2 8PF AAA 1 602 2 8PF PFO . 
D 2 8PF AAA 1 603 3 8PF PFO . 
E 2 8PF AAA 1 604 4 8PF PFO . 
F 3 MPO AAA 1 605 601 MPO MPO . 
G 4 PGE AAA 1 606 701 PGE PGE . 
H 5 PG4 AAA 1 607 801 PG4 PG4 . 
I 6 MYR AAA 1 608 1 MYR MYR . 
J 6 MYR AAA 1 609 2 MYR MYR . 
K 6 MYR AAA 1 610 3 MYR MYR . 
L 6 MYR AAA 1 611 5 MYR MYR . 
M 7 MPD AAA 1 612 1 MPD MPD . 
N 7 MPD AAA 1 613 2 MPD MPD . 
O 7 MPD AAA 1 614 5 MPD MPD . 
P 7 MPD AAA 1 615 6 MPD MPD . 
Q 7 MPD AAA 1 616 7 MPD MPD . 
R 7 MPD AAA 1 617 8 MPD MPD . 
S 8 EDO AAA 1 618 1 EDO EDO . 
T 9 HOH AAA 1 701 26 HOH HOH . 
T 9 HOH AAA 2 702 47 HOH HOH . 
T 9 HOH AAA 3 703 44 HOH HOH . 
T 9 HOH AAA 4 704 74 HOH HOH . 
T 9 HOH AAA 5 705 22 HOH HOH . 
T 9 HOH AAA 6 706 28 HOH HOH . 
T 9 HOH AAA 7 707 4 HOH HOH . 
T 9 HOH AAA 8 708 91 HOH HOH . 
T 9 HOH AAA 9 709 76 HOH HOH . 
T 9 HOH AAA 10 710 86 HOH HOH . 
T 9 HOH AAA 11 711 11 HOH HOH . 
T 9 HOH AAA 12 712 93 HOH HOH . 
T 9 HOH AAA 13 713 85 HOH HOH . 
T 9 HOH AAA 14 714 30 HOH HOH . 
T 9 HOH AAA 15 715 10 HOH HOH . 
T 9 HOH AAA 16 716 79 HOH HOH . 
T 9 HOH AAA 17 717 39 HOH HOH . 
T 9 HOH AAA 18 718 62 HOH HOH . 
T 9 HOH AAA 19 719 9 HOH HOH . 
T 9 HOH AAA 20 720 3 HOH HOH . 
T 9 HOH AAA 21 721 18 HOH HOH . 
T 9 HOH AAA 22 722 34 HOH HOH . 
T 9 HOH AAA 23 723 53 HOH HOH . 
T 9 HOH AAA 24 724 1 HOH HOH . 
T 9 HOH AAA 25 725 19 HOH HOH . 
T 9 HOH AAA 26 726 58 HOH HOH . 
T 9 HOH AAA 27 727 54 HOH HOH . 
T 9 HOH AAA 28 728 42 HOH HOH . 
T 9 HOH AAA 29 729 55 HOH HOH . 
T 9 HOH AAA 30 730 7 HOH HOH . 
T 9 HOH AAA 31 731 45 HOH HOH . 
T 9 HOH AAA 32 732 75 HOH HOH . 
T 9 HOH AAA 33 733 23 HOH HOH . 
T 9 HOH AAA 34 734 51 HOH HOH . 
T 9 HOH AAA 35 735 29 HOH HOH . 
T 9 HOH AAA 36 736 2 HOH HOH . 
T 9 HOH AAA 37 737 15 HOH HOH . 
T 9 HOH AAA 38 738 66 HOH HOH . 
T 9 HOH AAA 39 739 12 HOH HOH . 
T 9 HOH AAA 40 740 61 HOH HOH . 
T 9 HOH AAA 41 741 80 HOH HOH . 
T 9 HOH AAA 42 742 21 HOH HOH . 
T 9 HOH AAA 43 743 65 HOH HOH . 
T 9 HOH AAA 44 744 24 HOH HOH . 
T 9 HOH AAA 45 745 59 HOH HOH . 
T 9 HOH AAA 46 746 27 HOH HOH . 
T 9 HOH AAA 47 747 32 HOH HOH . 
T 9 HOH AAA 48 748 36 HOH HOH . 
T 9 HOH AAA 49 749 31 HOH HOH . 
T 9 HOH AAA 50 750 38 HOH HOH . 
T 9 HOH AAA 51 751 43 HOH HOH . 
T 9 HOH AAA 52 752 84 HOH HOH . 
T 9 HOH AAA 53 753 5 HOH HOH . 
T 9 HOH AAA 54 754 49 HOH HOH . 
T 9 HOH AAA 55 755 63 HOH HOH . 
T 9 HOH AAA 56 756 35 HOH HOH . 
T 9 HOH AAA 57 757 6 HOH HOH . 
T 9 HOH AAA 58 758 82 HOH HOH . 
T 9 HOH AAA 59 759 83 HOH HOH . 
T 9 HOH AAA 60 760 13 HOH HOH . 
T 9 HOH AAA 61 761 92 HOH HOH . 
T 9 HOH AAA 62 762 73 HOH HOH . 
T 9 HOH AAA 63 763 16 HOH HOH . 
T 9 HOH AAA 64 764 48 HOH HOH . 
T 9 HOH AAA 65 765 94 HOH HOH . 
T 9 HOH AAA 66 766 90 HOH HOH . 
T 9 HOH AAA 67 767 60 HOH HOH . 
T 9 HOH AAA 68 768 67 HOH HOH . 
T 9 HOH AAA 69 769 33 HOH HOH . 
T 9 HOH AAA 70 770 46 HOH HOH . 
T 9 HOH AAA 71 771 89 HOH HOH . 
T 9 HOH AAA 72 772 37 HOH HOH . 
T 9 HOH AAA 73 773 57 HOH HOH . 
T 9 HOH AAA 74 774 88 HOH HOH . 
T 9 HOH AAA 75 775 52 HOH HOH . 
T 9 HOH AAA 76 776 50 HOH HOH . 
T 9 HOH AAA 77 777 81 HOH HOH . 
T 9 HOH AAA 78 778 40 HOH HOH . 
T 9 HOH AAA 79 779 69 HOH HOH . 
T 9 HOH AAA 80 780 71 HOH HOH . 
T 9 HOH AAA 81 781 68 HOH HOH . 
T 9 HOH AAA 82 782 78 HOH HOH . 
T 9 HOH AAA 83 783 95 HOH HOH . 
T 9 HOH AAA 84 784 87 HOH HOH . 
T 9 HOH AAA 85 785 77 HOH HOH . 
T 9 HOH AAA 86 786 20 HOH HOH . 
T 9 HOH AAA 87 787 41 HOH HOH . 
T 9 HOH AAA 88 788 56 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . Q 7 26.169 4.863 7.314 1 88.47 ? C1 MPD 616 AAA 1 
HETATM 2 C C2 MPD . . . Q 7 25.491 4.609 8.648 1 94.6 ? C2 MPD 616 AAA 1 
HETATM 3 O O2 MPD . . . Q 7 26.422 3.779 9.36 1 103.55 ? O2 MPD 616 AAA 1 
HETATM 4 C CM MPD . . . Q 7 24.198 3.839 8.433 1 94.59 ? CM MPD 616 AAA 1 
HETATM 5 C C3 MPD . . . Q 7 25.263 5.906 9.443 1 84.04 ? C3 MPD 616 AAA 1 
HETATM 6 C C4 MPD . . . Q 7 24.853 5.77 10.916 1 89.5 ? C4 MPD 616 AAA 1 
HETATM 7 O O4 MPD . . . Q 7 25.055 7.014 11.606 1 83.28 ? O4 MPD 616 AAA 1 
HETATM 8 C C5 MPD . . . Q 7 23.437 5.323 11.182 1 81.47 ? C5 MPD 616 AAA 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#