data_7AAJ # _model_server_result.job_id 3wxowUZ8TjgIbUOa-0lZAQ _model_server_result.datetime_utc '2024-10-19 16:46:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7aaj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":403}' # _entry.id 7AAJ # _exptl.entry_id 7AAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AAJ _cell.length_a 81.163 _cell.length_b 84.608 _cell.length_c 108.913 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 263 B CYS 261 1_555 C CHA DPM . B DPM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? covale ? covale2 B SG CYS 263 A CYS 261 1_555 E CHA DPM . A DPM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.766 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 184 n n C1 C2 GOL sing 185 n n C1 H11 GOL sing 186 n n C1 H12 GOL sing 187 n n O1 HO1 GOL sing 188 n n C2 O2 GOL sing 189 n n C2 C3 GOL sing 190 n n C2 H2 GOL sing 191 n n O2 HO2 GOL sing 192 n n C3 O3 GOL sing 193 n n C3 H31 GOL sing 194 n n C3 H32 GOL sing 195 n n O3 HO3 GOL sing 196 n n # _atom_sites.entry_id 7AAJ _atom_sites.fract_transf_matrix[1][1] 0.012321 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011819 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009182 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DPM B 1 401 365 DPM DPM . D 3 GOL B 1 402 3 GOL GOL . E 2 DPM A 1 401 365 DPM DPM . F 3 GOL A 1 402 2 GOL GOL . G 3 GOL A 1 403 4 GOL GOL . H 4 HOH B 1 501 274 HOH HOH . H 4 HOH B 2 502 6 HOH HOH . H 4 HOH B 3 503 9 HOH HOH . H 4 HOH B 4 504 119 HOH HOH . H 4 HOH B 5 505 87 HOH HOH . H 4 HOH B 6 506 236 HOH HOH . H 4 HOH B 7 507 83 HOH HOH . H 4 HOH B 8 508 12 HOH HOH . H 4 HOH B 9 509 230 HOH HOH . H 4 HOH B 10 510 16 HOH HOH . H 4 HOH B 11 511 54 HOH HOH . H 4 HOH B 12 512 74 HOH HOH . H 4 HOH B 13 513 28 HOH HOH . H 4 HOH B 14 514 19 HOH HOH . H 4 HOH B 15 515 67 HOH HOH . H 4 HOH B 16 516 5 HOH HOH . H 4 HOH B 17 517 89 HOH HOH . H 4 HOH B 18 518 258 HOH HOH . H 4 HOH B 19 519 125 HOH HOH . H 4 HOH B 20 520 27 HOH HOH . H 4 HOH B 21 521 199 HOH HOH . H 4 HOH B 22 522 108 HOH HOH . H 4 HOH B 23 523 66 HOH HOH . H 4 HOH B 24 524 22 HOH HOH . H 4 HOH B 25 525 232 HOH HOH . H 4 HOH B 26 526 60 HOH HOH . H 4 HOH B 27 527 202 HOH HOH . H 4 HOH B 28 528 11 HOH HOH . H 4 HOH B 29 529 229 HOH HOH . H 4 HOH B 30 530 123 HOH HOH . H 4 HOH B 31 531 126 HOH HOH . H 4 HOH B 32 532 161 HOH HOH . H 4 HOH B 33 533 34 HOH HOH . H 4 HOH B 34 534 227 HOH HOH . H 4 HOH B 35 535 7 HOH HOH . H 4 HOH B 36 536 245 HOH HOH . H 4 HOH B 37 537 61 HOH HOH . H 4 HOH B 38 538 23 HOH HOH . H 4 HOH B 39 539 2 HOH HOH . H 4 HOH B 40 540 97 HOH HOH . H 4 HOH B 41 541 163 HOH HOH . H 4 HOH B 42 542 65 HOH HOH . H 4 HOH B 43 543 203 HOH HOH . H 4 HOH B 44 544 35 HOH HOH . H 4 HOH B 45 545 55 HOH HOH . H 4 HOH B 46 546 259 HOH HOH . H 4 HOH B 47 547 24 HOH HOH . H 4 HOH B 48 548 51 HOH HOH . H 4 HOH B 49 549 198 HOH HOH . H 4 HOH B 50 550 37 HOH HOH . H 4 HOH B 51 551 260 HOH HOH . H 4 HOH B 52 552 170 HOH HOH . H 4 HOH B 53 553 57 HOH HOH . H 4 HOH B 54 554 100 HOH HOH . H 4 HOH B 55 555 131 HOH HOH . H 4 HOH B 56 556 159 HOH HOH . H 4 HOH B 57 557 188 HOH HOH . H 4 HOH B 58 558 205 HOH HOH . H 4 HOH B 59 559 223 HOH HOH . H 4 HOH B 60 560 226 HOH HOH . H 4 HOH B 61 561 53 HOH HOH . H 4 HOH B 62 562 204 HOH HOH . H 4 HOH B 63 563 30 HOH HOH . H 4 HOH B 64 564 112 HOH HOH . H 4 HOH B 65 565 135 HOH HOH . H 4 HOH B 66 566 132 HOH HOH . H 4 HOH B 67 567 48 HOH HOH . H 4 HOH B 68 568 237 HOH HOH . H 4 HOH B 69 569 197 HOH HOH . H 4 HOH B 70 570 195 HOH HOH . H 4 HOH B 71 571 178 HOH HOH . H 4 HOH B 72 572 272 HOH HOH . I 4 HOH A 1 501 267 HOH HOH . I 4 HOH A 2 502 104 HOH HOH . I 4 HOH A 3 503 29 HOH HOH . I 4 HOH A 4 504 242 HOH HOH . I 4 HOH A 5 505 46 HOH HOH . I 4 HOH A 6 506 33 HOH HOH . I 4 HOH A 7 507 160 HOH HOH . I 4 HOH A 8 508 72 HOH HOH . I 4 HOH A 9 509 26 HOH HOH . I 4 HOH A 10 510 224 HOH HOH . I 4 HOH A 11 511 248 HOH HOH . I 4 HOH A 12 512 246 HOH HOH . I 4 HOH A 13 513 165 HOH HOH . I 4 HOH A 14 514 218 HOH HOH . I 4 HOH A 15 515 268 HOH HOH . I 4 HOH A 16 516 10 HOH HOH . I 4 HOH A 17 517 251 HOH HOH . I 4 HOH A 18 518 43 HOH HOH . I 4 HOH A 19 519 93 HOH HOH . I 4 HOH A 20 520 42 HOH HOH . I 4 HOH A 21 521 247 HOH HOH . I 4 HOH A 22 522 13 HOH HOH . I 4 HOH A 23 523 3 HOH HOH . I 4 HOH A 24 524 44 HOH HOH . I 4 HOH A 25 525 31 HOH HOH . I 4 HOH A 26 526 85 HOH HOH . I 4 HOH A 27 527 14 HOH HOH . I 4 HOH A 28 528 15 HOH HOH . I 4 HOH A 29 529 52 HOH HOH . I 4 HOH A 30 530 154 HOH HOH . I 4 HOH A 31 531 265 HOH HOH . I 4 HOH A 32 532 21 HOH HOH . I 4 HOH A 33 533 250 HOH HOH . I 4 HOH A 34 534 1 HOH HOH . I 4 HOH A 35 535 63 HOH HOH . I 4 HOH A 36 536 79 HOH HOH . I 4 HOH A 37 537 47 HOH HOH . I 4 HOH A 38 538 88 HOH HOH . I 4 HOH A 39 539 173 HOH HOH . I 4 HOH A 40 540 273 HOH HOH . I 4 HOH A 41 541 69 HOH HOH . I 4 HOH A 42 542 20 HOH HOH . I 4 HOH A 43 543 59 HOH HOH . I 4 HOH A 44 544 106 HOH HOH . I 4 HOH A 45 545 40 HOH HOH . I 4 HOH A 46 546 252 HOH HOH . I 4 HOH A 47 547 254 HOH HOH . I 4 HOH A 48 548 180 HOH HOH . I 4 HOH A 49 549 243 HOH HOH . I 4 HOH A 50 550 244 HOH HOH . I 4 HOH A 51 551 73 HOH HOH . I 4 HOH A 52 552 211 HOH HOH . I 4 HOH A 53 553 270 HOH HOH . I 4 HOH A 54 554 32 HOH HOH . I 4 HOH A 55 555 78 HOH HOH . I 4 HOH A 56 556 115 HOH HOH . I 4 HOH A 57 557 41 HOH HOH . I 4 HOH A 58 558 96 HOH HOH . I 4 HOH A 59 559 84 HOH HOH . I 4 HOH A 60 560 39 HOH HOH . I 4 HOH A 61 561 221 HOH HOH . I 4 HOH A 62 562 171 HOH HOH . I 4 HOH A 63 563 45 HOH HOH . I 4 HOH A 64 564 185 HOH HOH . I 4 HOH A 65 565 18 HOH HOH . I 4 HOH A 66 566 128 HOH HOH . I 4 HOH A 67 567 208 HOH HOH . I 4 HOH A 68 568 166 HOH HOH . I 4 HOH A 69 569 116 HOH HOH . I 4 HOH A 70 570 127 HOH HOH . I 4 HOH A 71 571 68 HOH HOH . I 4 HOH A 72 572 213 HOH HOH . I 4 HOH A 73 573 121 HOH HOH . I 4 HOH A 74 574 77 HOH HOH . I 4 HOH A 75 575 215 HOH HOH . I 4 HOH A 76 576 176 HOH HOH . I 4 HOH A 77 577 276 HOH HOH . I 4 HOH A 78 578 269 HOH HOH . I 4 HOH A 79 579 266 HOH HOH . I 4 HOH A 80 580 95 HOH HOH . I 4 HOH A 81 581 241 HOH HOH . I 4 HOH A 82 582 130 HOH HOH . I 4 HOH A 83 583 101 HOH HOH . I 4 HOH A 84 584 80 HOH HOH . I 4 HOH A 85 585 196 HOH HOH . I 4 HOH A 86 586 220 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 179.493 117.085 153.362 1 77.97 ? C1 GOL 403 A 1 HETATM 2 O O1 GOL . . . G 3 179.98 117.583 152.159 1 75.35 ? O1 GOL 403 A 1 HETATM 3 C C2 GOL . . . G 3 178.315 117.994 153.731 1 88.2 ? C2 GOL 403 A 1 HETATM 4 O O2 GOL . . . G 3 177.131 117.323 153.805 1 82.21 ? O2 GOL 403 A 1 HETATM 5 C C3 GOL . . . G 3 178.751 118.643 155.059 1 78.5 ? C3 GOL 403 A 1 HETATM 6 O O3 GOL . . . G 3 178.299 117.822 156.072 1 75.09 ? O3 GOL 403 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #