data_7ABR # _model_server_result.job_id jY1mweDOQf4y01pDG_MI3A _model_server_result.datetime_utc '2025-04-21 21:34:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7abr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":1001}' # _entry.id 7ABR # _exptl.entry_id 7ABR _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7ABR _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7ABR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details heptameric _pdbx_struct_assembly.oligomeric_count 7 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NH2 ARG 333 A ARG 333 1_555 J O2G ATP . A ATP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.299 ? covale ? covale2 A CG PRO 388 A PRO 388 1_555 H C8 ADP . A ADP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.497 ? covale ? covale3 C C GLY 211 C GLY 211 1_555 L O2B ATP . C ATP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? covale ? covale4 D N GLY 213 D GLY 213 1_555 N O1B ATP . D ATP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.302 ? covale ? covale5 D NH1 ARG 704 D ARG 704 1_555 P O2G ATP . D ATP 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.301 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7ABR _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code H 3 ADP A 1 1001 1001 ADP ADP . I 3 ADP A 1 1002 1002 ADP ADP . J 4 ATP A 1 1003 1001 ATP ATP . K 3 ADP B 1 901 1002 ADP ADP . L 4 ATP C 1 1001 1001 ATP ATP . M 4 ATP C 1 1002 1002 ATP ATP . N 4 ATP D 1 1001 1001 ATP ATP . O 4 ATP D 1 1002 1002 ATP ATP . P 4 ATP D 1 1003 1002 ATP ATP . Q 4 ATP E 1 1001 1001 ATP ATP . R 3 ADP F 1 1001 1001 ADP ADP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . N 4 149.874 144.178 189.112 1 37.96 ? PG ATP 1001 D 1 HETATM 2 O O1G ATP . . . N 4 149.066 145.131 189.928 1 37.96 ? O1G ATP 1001 D 1 HETATM 3 O O2G ATP . . . N 4 150.338 144.74 187.81 1 37.96 ? O2G ATP 1001 D 1 HETATM 4 O O3G ATP . . . N 4 149.252 142.833 188.961 1 37.96 ? O3G ATP 1001 D 1 HETATM 5 P PB ATP . . . N 4 151.121 143.476 191.491 1 37.96 ? PB ATP 1001 D 1 HETATM 6 O O1B ATP . . . N 4 152.45 143.532 192.225 1 37.96 ? O1B ATP 1001 D 1 HETATM 7 O O2B ATP . . . N 4 149.875 144.036 192.101 1 37.96 ? O2B ATP 1001 D 1 HETATM 8 O O3B ATP . . . N 4 151.211 143.933 189.957 1 37.96 ? O3B ATP 1001 D 1 HETATM 9 P PA ATP . . . N 4 150.031 141.27 192.511 1 37.96 ? PA ATP 1001 D 1 HETATM 10 O O1A ATP . . . N 4 148.635 140.972 192.052 1 37.96 ? O1A ATP 1001 D 1 HETATM 11 O O2A ATP . . . N 4 150.25 142.056 193.763 1 37.96 ? O2A ATP 1001 D 1 HETATM 12 O O3A ATP . . . N 4 150.817 141.941 191.314 1 37.96 ? O3A ATP 1001 D 1 HETATM 13 O O5' ATP . . . N 4 150.861 139.921 192.627 1 37.96 ? O5' ATP 1001 D 1 HETATM 14 C C5' ATP . . . N 4 150.177 138.707 192.416 1 37.96 ? C5' ATP 1001 D 1 HETATM 15 C C4' ATP . . . N 4 150.763 137.716 193.383 1 37.96 ? C4' ATP 1001 D 1 HETATM 16 O O4' ATP . . . N 4 152.036 138.199 193.768 1 37.96 ? O4' ATP 1001 D 1 HETATM 17 C C3' ATP . . . N 4 149.89 137.707 194.613 1 37.96 ? C3' ATP 1001 D 1 HETATM 18 O O3' ATP . . . N 4 149.456 136.378 194.871 1 37.96 ? O3' ATP 1001 D 1 HETATM 19 C C2' ATP . . . N 4 150.791 138.166 195.72 1 37.96 ? C2' ATP 1001 D 1 HETATM 20 O O2' ATP . . . N 4 150.607 137.385 196.897 1 37.96 ? O2' ATP 1001 D 1 HETATM 21 C C1' ATP . . . N 4 152.162 137.938 195.15 1 37.96 ? C1' ATP 1001 D 1 HETATM 22 N N9 ATP . . . N 4 153.088 138.85 195.834 1 37.96 ? N9 ATP 1001 D 1 HETATM 23 C C8 ATP . . . N 4 153.767 139.88 195.318 1 37.96 ? C8 ATP 1001 D 1 HETATM 24 N N7 ATP . . . N 4 154.526 140.479 196.266 1 37.96 ? N7 ATP 1001 D 1 HETATM 25 C C5 ATP . . . N 4 154.327 139.811 197.401 1 37.96 ? C5 ATP 1001 D 1 HETATM 26 C C6 ATP . . . N 4 154.813 139.907 198.768 1 37.96 ? C6 ATP 1001 D 1 HETATM 27 N N6 ATP . . . N 4 155.684 140.868 199.106 1 37.96 ? N6 ATP 1001 D 1 HETATM 28 N N1 ATP . . . N 4 154.361 139.017 199.658 1 37.96 ? N1 ATP 1001 D 1 HETATM 29 C C2 ATP . . . N 4 153.489 138.06 199.319 1 37.96 ? C2 ATP 1001 D 1 HETATM 30 N N3 ATP . . . N 4 153.007 137.915 198.089 1 37.96 ? N3 ATP 1001 D 1 HETATM 31 C C4 ATP . . . N 4 153.384 138.747 197.113 1 37.96 ? C4 ATP 1001 D 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #