data_7ABY
#
_model_server_result.job_id            aSh4Hl_aBIPtfHdzzuu5yQ 
_model_server_result.datetime_utc      '2024-11-19 14:25:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7aby 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":500}' 
#
_entry.id    7ABY 
#
_exptl.entry_id    7ABY 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7ABY 
_cell.length_a            40.756 
_cell.length_b            40.756 
_cell.length_c            131.791 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ABY 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LEU 125 A LEU 490 1_555 A N SNN 126 A SNN 491 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.215 ? 
covale ? covale2 A N1 SNN 126 A SNN 491 1_555 A CA GLY 127 A GLY 492 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 89 n n 
N1 C10 FMN doub 90 n n 
C2 O2 FMN doub 91 n n 
C2 N3 FMN sing 92 n n 
N3 C4 FMN sing 93 n n 
N3 HN3 FMN sing 94 n n 
C4 O4 FMN doub 95 n n 
C4 C4A FMN sing 96 n n 
C4A N5 FMN doub 97 n n 
C4A C10 FMN sing 98 n n 
N5 C5A FMN sing 99 n n 
C5A C6 FMN doub 100 n y 
C5A C9A FMN sing 101 n y 
C6 C7 FMN sing 102 n y 
C6 H6 FMN sing 103 n n 
C7 C7M FMN sing 104 n n 
C7 C8 FMN doub 105 n y 
C7M HM71 FMN sing 106 n n 
C7M HM72 FMN sing 107 n n 
C7M HM73 FMN sing 108 n n 
C8 C8M FMN sing 109 n n 
C8 C9 FMN sing 110 n y 
C8M HM81 FMN sing 111 n n 
C8M HM82 FMN sing 112 n n 
C8M HM83 FMN sing 113 n n 
C9 C9A FMN doub 114 n y 
C9 H9 FMN sing 115 n n 
C9A N10 FMN sing 116 n n 
N10 C10 FMN sing 117 n n 
N10 C1' FMN sing 118 n n 
C1' C2' FMN sing 119 n n 
C1' "H1'1" FMN sing 120 n n 
C1' "H1'2" FMN sing 121 n n 
C2' O2' FMN sing 122 n n 
C2' C3' FMN sing 123 n n 
C2' H2' FMN sing 124 n n 
O2' HO2' FMN sing 125 n n 
C3' O3' FMN sing 126 n n 
C3' C4' FMN sing 127 n n 
C3' H3' FMN sing 128 n n 
O3' HO3' FMN sing 129 n n 
C4' O4' FMN sing 130 n n 
C4' C5' FMN sing 131 n n 
C4' H4' FMN sing 132 n n 
O4' HO4' FMN sing 133 n n 
C5' O5' FMN sing 134 n n 
C5' "H5'1" FMN sing 135 n n 
C5' "H5'2" FMN sing 136 n n 
O5' P FMN sing 137 n n 
P O1P FMN doub 138 n n 
P O2P FMN sing 139 n n 
P O3P FMN sing 140 n n 
O2P HOP2 FMN sing 141 n n 
O3P HOP3 FMN sing 142 n n 
#
_atom_sites.entry_id                     7ABY 
_atom_sites.fract_transf_matrix[1][1]    0.024536 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024536 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMN A 1 500 500 FMN FMN . 
C 3 ACT A 1 501 501 ACT ACT . 
D 4 HOH A 1 601 35 HOH HOH . 
D 4 HOH A 2 602 106 HOH HOH . 
D 4 HOH A 3 603 32 HOH HOH . 
D 4 HOH A 4 604 37 HOH HOH . 
D 4 HOH A 5 605 36 HOH HOH . 
D 4 HOH A 6 606 31 HOH HOH . 
D 4 HOH A 7 607 17 HOH HOH . 
D 4 HOH A 8 608 71 HOH HOH . 
D 4 HOH A 9 609 48 HOH HOH . 
D 4 HOH A 10 610 41 HOH HOH . 
D 4 HOH A 11 611 87 HOH HOH . 
D 4 HOH A 12 612 11 HOH HOH . 
D 4 HOH A 13 613 50 HOH HOH . 
D 4 HOH A 14 614 69 HOH HOH . 
D 4 HOH A 15 615 34 HOH HOH . 
D 4 HOH A 16 616 82 HOH HOH . 
D 4 HOH A 17 617 85 HOH HOH . 
D 4 HOH A 18 618 18 HOH HOH . 
D 4 HOH A 19 619 12 HOH HOH . 
D 4 HOH A 20 620 102 HOH HOH . 
D 4 HOH A 21 621 23 HOH HOH . 
D 4 HOH A 22 622 46 HOH HOH . 
D 4 HOH A 23 623 56 HOH HOH . 
D 4 HOH A 24 624 29 HOH HOH . 
D 4 HOH A 25 625 4 HOH HOH . 
D 4 HOH A 26 626 6 HOH HOH . 
D 4 HOH A 27 627 22 HOH HOH . 
D 4 HOH A 28 628 49 HOH HOH . 
D 4 HOH A 29 629 5 HOH HOH . 
D 4 HOH A 30 630 13 HOH HOH . 
D 4 HOH A 31 631 68 HOH HOH . 
D 4 HOH A 32 632 66 HOH HOH . 
D 4 HOH A 33 633 94 HOH HOH . 
D 4 HOH A 34 634 10 HOH HOH . 
D 4 HOH A 35 635 2 HOH HOH . 
D 4 HOH A 36 636 44 HOH HOH . 
D 4 HOH A 37 637 14 HOH HOH . 
D 4 HOH A 38 638 74 HOH HOH . 
D 4 HOH A 39 639 42 HOH HOH . 
D 4 HOH A 40 640 33 HOH HOH . 
D 4 HOH A 41 641 54 HOH HOH . 
D 4 HOH A 42 642 59 HOH HOH . 
D 4 HOH A 43 643 24 HOH HOH . 
D 4 HOH A 44 644 21 HOH HOH . 
D 4 HOH A 45 645 89 HOH HOH . 
D 4 HOH A 46 646 16 HOH HOH . 
D 4 HOH A 47 647 103 HOH HOH . 
D 4 HOH A 48 648 62 HOH HOH . 
D 4 HOH A 49 649 53 HOH HOH . 
D 4 HOH A 50 650 45 HOH HOH . 
D 4 HOH A 51 651 64 HOH HOH . 
D 4 HOH A 52 652 76 HOH HOH . 
D 4 HOH A 53 653 88 HOH HOH . 
D 4 HOH A 54 654 1 HOH HOH . 
D 4 HOH A 55 655 3 HOH HOH . 
D 4 HOH A 56 656 92 HOH HOH . 
D 4 HOH A 57 657 99 HOH HOH . 
D 4 HOH A 58 658 40 HOH HOH . 
D 4 HOH A 59 659 73 HOH HOH . 
D 4 HOH A 60 660 43 HOH HOH . 
D 4 HOH A 61 661 95 HOH HOH . 
D 4 HOH A 62 662 65 HOH HOH . 
D 4 HOH A 63 663 25 HOH HOH . 
D 4 HOH A 64 664 63 HOH HOH . 
D 4 HOH A 65 665 15 HOH HOH . 
D 4 HOH A 66 666 80 HOH HOH . 
D 4 HOH A 67 667 77 HOH HOH . 
D 4 HOH A 68 668 78 HOH HOH . 
D 4 HOH A 69 669 51 HOH HOH . 
D 4 HOH A 70 670 39 HOH HOH . 
D 4 HOH A 71 671 20 HOH HOH . 
D 4 HOH A 72 672 9 HOH HOH . 
D 4 HOH A 73 673 27 HOH HOH . 
D 4 HOH A 74 674 60 HOH HOH . 
D 4 HOH A 75 675 8 HOH HOH . 
D 4 HOH A 76 676 7 HOH HOH . 
D 4 HOH A 77 677 79 HOH HOH . 
D 4 HOH A 78 678 67 HOH HOH . 
D 4 HOH A 79 679 26 HOH HOH . 
D 4 HOH A 80 680 38 HOH HOH . 
D 4 HOH A 81 681 96 HOH HOH . 
D 4 HOH A 82 682 28 HOH HOH . 
D 4 HOH A 83 683 93 HOH HOH . 
D 4 HOH A 84 684 61 HOH HOH . 
D 4 HOH A 85 685 104 HOH HOH . 
D 4 HOH A 86 686 105 HOH HOH . 
D 4 HOH A 87 687 84 HOH HOH . 
D 4 HOH A 88 688 91 HOH HOH . 
D 4 HOH A 89 689 57 HOH HOH . 
D 4 HOH A 90 690 101 HOH HOH . 
D 4 HOH A 91 691 19 HOH HOH . 
D 4 HOH A 92 692 100 HOH HOH . 
D 4 HOH A 93 693 70 HOH HOH . 
D 4 HOH A 94 694 98 HOH HOH . 
D 4 HOH A 95 695 97 HOH HOH . 
D 4 HOH A 96 696 47 HOH HOH . 
D 4 HOH A 97 697 72 HOH HOH . 
D 4 HOH A 98 698 58 HOH HOH . 
D 4 HOH A 99 699 75 HOH HOH . 
D 4 HOH A 100 700 30 HOH HOH . 
D 4 HOH A 101 701 55 HOH HOH . 
D 4 HOH A 102 702 52 HOH HOH . 
D 4 HOH A 103 703 90 HOH HOH . 
D 4 HOH A 104 704 81 HOH HOH . 
D 4 HOH A 105 705 83 HOH HOH . 
D 4 HOH A 106 706 86 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . B 2 7.229 -1.707 20.279 1 15.42 ? N1 FMN 500 A 1 
HETATM 2 C C2 FMN . . . B 2 7.774 -2.004 19.054 1 16.38 ? C2 FMN 500 A 1 
HETATM 3 O O2 FMN . . . B 2 8.506 -2.98 18.937 1 17.85 ? O2 FMN 500 A 1 
HETATM 4 N N3 FMN . . . B 2 7.532 -1.198 17.959 1 15.5 ? N3 FMN 500 A 1 
HETATM 5 C C4 FMN . . . B 2 6.73 -0.093 18.055 1 15.93 ? C4 FMN 500 A 1 
HETATM 6 O O4 FMN . . . B 2 6.526 0.598 17.05 1 17.35 ? O4 FMN 500 A 1 
HETATM 7 C C4A FMN . . . B 2 6.173 0.212 19.29 1 13.57 ? C4A FMN 500 A 1 
HETATM 8 N N5 FMN . . . B 2 5.374 1.317 19.412 1 14.67 ? N5 FMN 500 A 1 
HETATM 9 C C5A FMN . . . B 2 4.837 1.643 20.643 1 13.6 ? C5A FMN 500 A 1 
HETATM 10 C C6 FMN . . . B 2 4.03 2.767 20.755 1 13.97 ? C6 FMN 500 A 1 
HETATM 11 C C7 FMN . . . B 2 3.474 3.125 21.98 1 14.79 ? C7 FMN 500 A 1 
HETATM 12 C C7M FMN . . . B 2 2.617 4.35 22.087 1 15.83 ? C7M FMN 500 A 1 
HETATM 13 C C8 FMN . . . B 2 3.721 2.323 23.087 1 14.22 ? C8 FMN 500 A 1 
HETATM 14 C C8M FMN . . . B 2 3.123 2.686 24.413 1 16.5 ? C8M FMN 500 A 1 
HETATM 15 C C9 FMN . . . B 2 4.515 1.18 22.972 1 14.23 ? C9 FMN 500 A 1 
HETATM 16 C C9A FMN . . . B 2 5.084 0.829 21.75 1 14.15 ? C9A FMN 500 A 1 
HETATM 17 N N10 FMN . . . B 2 5.876 -0.314 21.623 1 13.92 ? N10 FMN 500 A 1 
HETATM 18 C C10 FMN . . . B 2 6.436 -0.598 20.399 1 14.2 ? C10 FMN 500 A 1 
HETATM 19 C C1' FMN . . . B 2 6.226 -1.189 22.796 1 14.16 ? C1' FMN 500 A 1 
HETATM 20 C C2' FMN . . . B 2 5.304 -2.37 23.071 1 13.33 ? C2' FMN 500 A 1 
HETATM 21 O O2' FMN . . . B 2 3.969 -1.97 22.914 1 14.52 ? O2' FMN 500 A 1 
HETATM 22 C C3' FMN . . . B 2 5.535 -2.884 24.497 1 15.19 ? C3' FMN 500 A 1 
HETATM 23 O O3' FMN . . . B 2 5.402 -1.802 25.392 1 16.58 ? O3' FMN 500 A 1 
HETATM 24 C C4' FMN . . . B 2 6.925 -3.496 24.657 1 15.98 ? C4' FMN 500 A 1 
HETATM 25 O O4' FMN . . . B 2 7.067 -4.625 23.815 1 17.01 ? O4' FMN 500 A 1 
HETATM 26 C C5' FMN . . . B 2 7.232 -3.891 26.105 1 17.54 ? C5' FMN 500 A 1 
HETATM 27 O O5' FMN . . . B 2 6.099 -4.523 26.676 1 18.3 ? O5' FMN 500 A 1 
HETATM 28 P P FMN . . . B 2 5.971 -6.127 26.725 1 21.07 ? P FMN 500 A 1 
HETATM 29 O O1P FMN . . . B 2 4.688 -6.477 27.454 1 21.5 ? O1P FMN 500 A 1 
HETATM 30 O O2P FMN . . . B 2 5.982 -6.591 25.282 1 21.25 ? O2P FMN 500 A 1 
HETATM 31 O O3P FMN . . . B 2 7.137 -6.767 27.438 1 24.7 ? O3P FMN 500 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           365 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#