data_7AC4 # _model_server_result.job_id LB0ckLa9sSeEfZuSjB3MVw _model_server_result.datetime_utc '2025-08-15 10:02:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ac4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 7AC4 # _exptl.entry_id 7AC4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7AC4 _cell.length_a 77.96 _cell.length_b 77.96 _cell.length_c 77.96 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7AC4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc1 D NA NA . B NA 102 1_555 F O HOH . B HOH 204 9_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.813 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7AC4 _atom_sites.fract_transf_matrix[1][1] 0.012827 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGR B 1 101 101 PGR PGR . D 4 NA B 1 102 1 NA NA . E 5 HOH A 1 101 41 HOH HOH . E 5 HOH A 2 102 16 HOH HOH . E 5 HOH A 3 103 21 HOH HOH . E 5 HOH A 4 104 11 HOH HOH . E 5 HOH A 5 105 27 HOH HOH . E 5 HOH A 6 106 54 HOH HOH . E 5 HOH A 7 107 3 HOH HOH . E 5 HOH A 8 108 45 HOH HOH . E 5 HOH A 9 109 17 HOH HOH . E 5 HOH A 10 110 58 HOH HOH . E 5 HOH A 11 111 47 HOH HOH . E 5 HOH A 12 112 14 HOH HOH . E 5 HOH A 13 113 36 HOH HOH . E 5 HOH A 14 114 56 HOH HOH . E 5 HOH A 15 115 48 HOH HOH . E 5 HOH A 16 116 23 HOH HOH . E 5 HOH A 17 117 55 HOH HOH . E 5 HOH A 18 118 53 HOH HOH . E 5 HOH A 19 119 51 HOH HOH . E 5 HOH A 20 120 46 HOH HOH . F 5 HOH B 1 201 24 HOH HOH . F 5 HOH B 2 202 12 HOH HOH . F 5 HOH B 3 203 6 HOH HOH . F 5 HOH B 4 204 52 HOH HOH . F 5 HOH B 5 205 2 HOH HOH . F 5 HOH B 6 206 10 HOH HOH . F 5 HOH B 7 207 7 HOH HOH . F 5 HOH B 8 208 1 HOH HOH . F 5 HOH B 9 209 9 HOH HOH . F 5 HOH B 10 210 15 HOH HOH . F 5 HOH B 11 211 5 HOH HOH . F 5 HOH B 12 212 13 HOH HOH . F 5 HOH B 13 213 18 HOH HOH . F 5 HOH B 14 214 57 HOH HOH . F 5 HOH B 15 215 4 HOH HOH . F 5 HOH B 16 216 50 HOH HOH . F 5 HOH B 17 217 8 HOH HOH . F 5 HOH B 18 218 25 HOH HOH . F 5 HOH B 19 219 20 HOH HOH . F 5 HOH B 20 220 26 HOH HOH . F 5 HOH B 21 221 35 HOH HOH . F 5 HOH B 22 222 22 HOH HOH . F 5 HOH B 23 223 49 HOH HOH . F 5 HOH B 24 224 44 HOH HOH . F 5 HOH B 25 225 39 HOH HOH . F 5 HOH B 26 226 33 HOH HOH . F 5 HOH B 27 227 59 HOH HOH . F 5 HOH B 28 228 34 HOH HOH . F 5 HOH B 29 229 28 HOH HOH . F 5 HOH B 30 230 19 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -18.103 _atom_site.Cartn_y -14.012 _atom_site.Cartn_z -10.344 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #